RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 C5orf47Q569G3 176 aa5.78□□□□□ -1.48
SF3B2-213ENST00000533421 S4R3F8 94 aa5.77□□□□□ -1.49
SF3B2-213ENST00000533421 LCA10Q71F78 164 aa5.76□□□□□ -1.49
SF3B2-213ENST00000533421 TRAV7A0A075B6U4 112 aa5.72□□□□□ -1.49
SF3B2-213ENST00000533421 CSAG1Q6PB30 78 aa5.72□□□□□ -1.49
SF3B2-213ENST00000533421 KRTAP19-1Q8IUB9 90 aa5.72□□□□□ -1.49
SF3B2-213ENST00000533421 KRTAP3-3Q9BYR6 98 aa5.7□□□□□ -1.5
SF3B2-213ENST00000533421 H3BPC8 53 aa5.69□□□□□ -1.5
SF3B2-213ENST00000533421 SMIM20Q8N5G0 67 aa5.67□□□□□ -1.5
SF3B2-213ENST00000533421 SNURFQ9Y675 71 aa5.67□□□□□ -1.5
SF3B2-213ENST00000533421 KRTAP19-6Q3LI70 58 aa5.65□□□□□ -1.5
SF3B2-213ENST00000533421 SYNE2Q8WXH0 6885 aaKnown RBP5.64□□□□□ -1.51
SF3B2-213ENST00000533421 SERP2Q8N6R1 65 aa5.62□□□□□ -1.51
SF3B2-213ENST00000533421 C20orf197Q8N268 126 aa5.61□□□□□ -1.51
SF3B2-213ENST00000533421 MACF1Q9UPN3 7388 aaKnown RBP5.6□□□□□ -1.51
SF3B2-213ENST00000533421 A8MUN3 132 aa5.6□□□□□ -1.51
SF3B2-213ENST00000533421 DMAC1Q96GE9 116 aa5.59□□□□□ -1.51
SF3B2-213ENST00000533421 NDUFC1O43677 76 aa5.58□□□□□ -1.52
SF3B2-213ENST00000533421 Q5VV11 94 aa5.53□□□□□ -1.52
SF3B2-213ENST00000533421 CRIPTQ9P021 101 aa5.53□□□□□ -1.52
SF3B2-213ENST00000533421 SPRR2GQ9BYE4 73 aa5.52□□□□□ -1.53
SF3B2-213ENST00000533421 COX7CP15954 63 aa5.51□□□□□ -1.53
SF3B2-213ENST00000533421 CYSTM1Q9H1C7 97 aa5.5□□□□□ -1.53
SF3B2-213ENST00000533421 H0YAA0 97 aa5.48□□□□□ -1.53
SF3B2-213ENST00000533421 ACYP2P14621 99 aa5.48□□□□□ -1.53
SF3B2-213ENST00000533421 ADM2Q7Z4H4 148 aa5.48□□□□□ -1.53
SF3B2-213ENST00000533421 ANAPC13Q9BS18 74 aa5.47□□□□□ -1.53
SF3B2-213ENST00000533421 KRTAP19-8Q3LI54 63 aa5.46□□□□□ -1.54
SF3B2-213ENST00000533421 A6NN06 94 aa5.45□□□□□ -1.54
SF3B2-213ENST00000533421 SPANXA2-OT1Q8N9U9 137 aa5.43□□□□□ -1.54
SF3B2-213ENST00000533421 CHKB-CPT1BH3BT56 60 aa5.42□□□□□ -1.54
SF3B2-213ENST00000533421 MT1BP07438 61 aa5.42□□□□□ -1.54
SF3B2-213ENST00000533421 P0C880 135 aa5.41□□□□□ -1.54
SF3B2-213ENST00000533421 CCDC179H3BU77 68 aa5.4□□□□□ -1.54
SF3B2-213ENST00000533421 KRTAP6-3Q3LI67 103 aa5.4□□□□□ -1.54
SF3B2-213ENST00000533421 H7BZZ5 65 aa5.39□□□□□ -1.55
SF3B2-213ENST00000533421 KRTAP3-2Q9BYR7 98 aa5.38□□□□□ -1.55
SF3B2-213ENST00000533421 NEBP20929 6669 aa5.35□□□□□ -1.55
SF3B2-213ENST00000533421 COA5Q86WW8 74 aa5.35□□□□□ -1.55
SF3B2-213ENST00000533421 KRTAP10-5P60370 271 aa5.34□□□□□ -1.55
SF3B2-213ENST00000533421 SPTSSBQ8NFR3 76 aa5.33□□□□□ -1.56
SF3B2-213ENST00000533421 MUC12Q9UKN1 5478 aa5.3□□□□□ -1.56
SF3B2-213ENST00000533421 R4GN34 69 aa5.3□□□□□ -1.56
SF3B2-213ENST00000533421 M0QZ58 72 aa5.29□□□□□ -1.56
SF3B2-213ENST00000533421 PLAC4Q8WY50 150 aa5.27□□□□□ -1.57
SF3B2-213ENST00000533421 PRO2289Q9P1D8 64 aa5.27□□□□□ -1.57
SF3B2-213ENST00000533421 LINC01554Q52M75 96 aa5.25□□□□□ -1.57
SF3B2-213ENST00000533421 KRTAP20-1Q3LI63 56 aa5.19□□□□□ -1.58
SF3B2-213ENST00000533421 KRTAP13-4Q3LI77 160 aa5.17□□□□□ -1.58
SF3B2-213ENST00000533421 ATP5EP56381 51 aaPredicted RBP5.12□□□□□ -1.59
SF3B2-213ENST00000533421 KMT2DO14686 5537 aa5.11□□□□□ -1.59
SF3B2-213ENST00000533421 KRTAP5-9P26371 169 aa5.11□□□□□ -1.59
SF3B2-213ENST00000533421 MDN1Q9NU22 5596 aa5.1□□□□□ -1.59
SF3B2-213ENST00000533421 SEC61GP60059 68 aa5.1□□□□□ -1.59
SF3B2-213ENST00000533421 TMEM258P61165 79 aa5.1□□□□□ -1.59
SF3B2-213ENST00000533421 MT1XP80297 61 aa5.1□□□□□ -1.59
SF3B2-213ENST00000533421 SERP1Q9Y6X1 66 aa5.1□□□□□ -1.59
SF3B2-213ENST00000533421 SPATA8Q6RVD6 105 aa5.07□□□□□ -1.6
SF3B2-213ENST00000533421 A0A0D9SG42 100 aa5.04□□□□□ -1.6
SF3B2-213ENST00000533421 A0A1B0GU69 56 aa5.04□□□□□ -1.6
SF3B2-213ENST00000533421 KRTAP12-2P59991 146 aa5.04□□□□□ -1.6
SF3B2-213ENST00000533421 A0A1B0GU33 70 aa5.03□□□□□ -1.6
SF3B2-213ENST00000533421 KRTAP8-1Q8IUC2 63 aa5□□□□□ -1.61
SF3B2-213ENST00000533421 SPRR2FQ96RM1 72 aa4.99□□□□□ -1.61
SF3B2-213ENST00000533421 PCP4P48539 62 aa4.96□□□□□ -1.62
SF3B2-213ENST00000533421 A8MU10 97 aa4.95□□□□□ -1.62
SF3B2-213ENST00000533421 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
SF3B2-213ENST00000533421 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
SF3B2-213ENST00000533421 KRTAP2-3P0C7H8 128 aa4.91□□□□□ -1.62
SF3B2-213ENST00000533421 SPRR2EP22531 72 aa4.91□□□□□ -1.62
SF3B2-213ENST00000533421 SPRR2BP35325 72 aa4.91□□□□□ -1.62
SF3B2-213ENST00000533421 SPRR2AP35326 72 aa4.91□□□□□ -1.62
SF3B2-213ENST00000533421 CAMK2N1Q7Z7J9 78 aa4.91□□□□□ -1.62
SF3B2-213ENST00000533421 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
SF3B2-213ENST00000533421 KRTAP2-4Q9BYR9 128 aa4.91□□□□□ -1.62
SF3B2-213ENST00000533421 KRTAP12-1P59990 96 aa4.9□□□□□ -1.63
SF3B2-213ENST00000533421 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
SF3B2-213ENST00000533421 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
SF3B2-213ENST00000533421 SMIM26A0A096LP01 95 aa4.85□□□□□ -1.63
SF3B2-213ENST00000533421 KRTAP4-8A0A0G2JLE6 195 aa4.84□□□□□ -1.63
SF3B2-213ENST00000533421 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
SF3B2-213ENST00000533421 PSPHP1O15172 72 aa4.82□□□□□ -1.64
SF3B2-213ENST00000533421 LCE1AQ5T7P2 110 aa4.81□□□□□ -1.64
SF3B2-213ENST00000533421 UQCR11O14957 56 aa4.76□□□□□ -1.65
SF3B2-213ENST00000533421 SPRR2DP22532 72 aa4.76□□□□□ -1.65
SF3B2-213ENST00000533421 Q1T7F1 81 aa4.76□□□□□ -1.65
SF3B2-213ENST00000533421 V9GYY9 64 aa4.73□□□□□ -1.65
SF3B2-213ENST00000533421 MIR22HGQ0VDD5 57 aa4.72□□□□□ -1.65
SF3B2-213ENST00000533421 KRTAP2-2Q9BYT5 123 aa4.72□□□□□ -1.65
SF3B2-213ENST00000533421 KRTAP2-1Q9BYU5 128 aa4.72□□□□□ -1.65
SF3B2-213ENST00000533421 RPS28P62857 69 aaKnown RBP4.68□□□□□ -1.66
SF3B2-213ENST00000533421 C10orf95Q9H7T3 257 aa4.68□□□□□ -1.66
SF3B2-213ENST00000533421 A6NED7 52 aa4.63□□□□□ -1.67
SF3B2-213ENST00000533421 LCE3BQ5TA77 95 aa4.61□□□□□ -1.67
SF3B2-213ENST00000533421 GPR98Q8WXG9 6306 aa4.61□□□□□ -1.67
SF3B2-213ENST00000533421 TNP1P09430 55 aa4.54□□□□□ -1.68
SF3B2-213ENST00000533421 KRTAP19-7Q3SYF9 63 aa4.54□□□□□ -1.68
SF3B2-213ENST00000533421 MT1EP04732 61 aa4.53□□□□□ -1.68
SF3B2-213ENST00000533421 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
SF3B2-213ENST00000533421 K7ERS5 55 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms