RNA–Protein interactions for RNA: ENST00000533308.1

COMMD9-207, Transcript of COMM domain containing 9, humanhuman

TSL 3

Gene COMMD9, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-207ENST00000533308 CYSTM1Q9H1C7 97 aa3.75□□□□□ -1.81
COMMD9-207ENST00000533308 COX7CP15954 63 aa3.74□□□□□ -1.81
COMMD9-207ENST00000533308 DMAC1Q96GE9 116 aa3.73□□□□□ -1.81
COMMD9-207ENST00000533308 KRTAP9-2Q9BYQ4 174 aa3.73□□□□□ -1.81
COMMD9-207ENST00000533308 A8MUN3 132 aa3.72□□□□□ -1.81
COMMD9-207ENST00000533308 ANAPC13Q9BS18 74 aa3.72□□□□□ -1.81
COMMD9-207ENST00000533308 CCDC179H3BU77 68 aa3.69□□□□□ -1.82
COMMD9-207ENST00000533308 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
COMMD9-207ENST00000533308 CSAG1Q6PB30 78 aa3.68□□□□□ -1.82
COMMD9-207ENST00000533308 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
COMMD9-207ENST00000533308 H7BZZ5 65 aa3.66□□□□□ -1.82
COMMD9-207ENST00000533308 NDUFC1O43677 76 aa3.66□□□□□ -1.82
COMMD9-207ENST00000533308 SPANXA2-OT1Q8N9U9 137 aa3.66□□□□□ -1.82
COMMD9-207ENST00000533308 ACYP2P14621 99 aa3.63□□□□□ -1.83
COMMD9-207ENST00000533308 CHKB-CPT1BH3BT56 60 aa3.59□□□□□ -1.83
COMMD9-207ENST00000533308 ADM2Q7Z4H4 148 aa3.59□□□□□ -1.83
COMMD9-207ENST00000533308 COA5Q86WW8 74 aa3.59□□□□□ -1.83
COMMD9-207ENST00000533308 KRTAP19-1Q8IUB9 90 aa3.58□□□□□ -1.84
COMMD9-207ENST00000533308 H0YAA0 97 aa3.57□□□□□ -1.84
COMMD9-207ENST00000533308 P0C880 135 aa3.57□□□□□ -1.84
COMMD9-207ENST00000533308 USH2AO75445 5202 aa3.54□□□□□ -1.84
COMMD9-207ENST00000533308 SPRR2GQ9BYE4 73 aa3.53□□□□□ -1.84
COMMD9-207ENST00000533308 CRCT1Q9UGL9 99 aa3.53□□□□□ -1.84
COMMD9-207ENST00000533308 KRTAP9-6A0A140TA67 174 aa3.52□□□□□ -1.85
COMMD9-207ENST00000533308 SPTSSBQ8NFR3 76 aa3.52□□□□□ -1.85
COMMD9-207ENST00000533308 MT1BP07438 61 aa3.5□□□□□ -1.85
COMMD9-207ENST00000533308 TMEM258P61165 79 aa3.49□□□□□ -1.85
COMMD9-207ENST00000533308 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
COMMD9-207ENST00000533308 CRIPTQ9P021 101 aa3.49□□□□□ -1.85
COMMD9-207ENST00000533308 ATP5EP56381 51 aaPredicted RBP3.48□□□□□ -1.85
COMMD9-207ENST00000533308 SSPOA2VEC9 5147 aa3.47□□□□□ -1.85
COMMD9-207ENST00000533308 FSIP2Q5CZC0 6907 aa3.47□□□□□ -1.85
COMMD9-207ENST00000533308 M0QZ58 72 aa3.46□□□□□ -1.86
COMMD9-207ENST00000533308 PCP4P48539 62 aa3.46□□□□□ -1.86
COMMD9-207ENST00000533308 Q5VV11 94 aa3.45□□□□□ -1.86
COMMD9-207ENST00000533308 R4GN34 69 aa3.45□□□□□ -1.86
COMMD9-207ENST00000533308 KRTAP13-4Q3LI77 160 aa3.44□□□□□ -1.86
COMMD9-207ENST00000533308 KRTAP19-6Q3LI70 58 aa3.43□□□□□ -1.86
COMMD9-207ENST00000533308 LOC100996750A0A140TA64 210 aa3.42□□□□□ -1.86
COMMD9-207ENST00000533308 KRTAP4-6Q9BYQ5 205 aa3.42□□□□□ -1.86
COMMD9-207ENST00000533308 LINC01554Q52M75 96 aa3.41□□□□□ -1.86
COMMD9-207ENST00000533308 SERP1Q9Y6X1 66 aa3.38□□□□□ -1.87
COMMD9-207ENST00000533308 A0A1B0GU69 56 aa3.37□□□□□ -1.87
COMMD9-207ENST00000533308 SEC61GP60059 68 aa3.37□□□□□ -1.87
COMMD9-207ENST00000533308 SPATA8Q6RVD6 105 aa3.36□□□□□ -1.87
COMMD9-207ENST00000533308 FCGBPQ9Y6R7 5405 aaPredicted RBP3.36□□□□□ -1.87
COMMD9-207ENST00000533308 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
COMMD9-207ENST00000533308 LINC01558Q9Y6Z2 57 aa3.34□□□□□ -1.87
COMMD9-207ENST00000533308 A0A1B0GU33 70 aa3.33□□□□□ -1.88
COMMD9-207ENST00000533308 A6NN06 94 aa3.33□□□□□ -1.88
COMMD9-207ENST00000533308 MT1XP80297 61 aa3.33□□□□□ -1.88
COMMD9-207ENST00000533308 A0A0D9SG42 100 aa3.32□□□□□ -1.88
COMMD9-207ENST00000533308 PLAC4Q8WY50 150 aa3.32□□□□□ -1.88
COMMD9-207ENST00000533308 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.3□□□□□ -1.88
COMMD9-207ENST00000533308 A8MU10 97 aa3.29□□□□□ -1.88
COMMD9-207ENST00000533308 PRR15LQ9BU68 103 aa3.29□□□□□ -1.88
COMMD9-207ENST00000533308 PSPHP1O15172 72 aa3.26□□□□□ -1.89
COMMD9-207ENST00000533308 KRTAP12-1P59990 96 aa3.26□□□□□ -1.89
COMMD9-207ENST00000533308 SMIM26A0A096LP01 95 aa3.25□□□□□ -1.89
COMMD9-207ENST00000533308 KRTAP12-2P59991 146 aa3.25□□□□□ -1.89
COMMD9-207ENST00000533308 Q1T7F1 81 aa3.25□□□□□ -1.89
COMMD9-207ENST00000533308 SPINT4Q6UDR6 99 aa3.23□□□□□ -1.89
COMMD9-207ENST00000533308 PRO2289Q9P1D8 64 aa3.23□□□□□ -1.89
COMMD9-207ENST00000533308 RPS28P62857 69 aaKnown RBP3.22□□□□□ -1.89
COMMD9-207ENST00000533308 V9GYY9 64 aa3.21□□□□□ -1.9
COMMD9-207ENST00000533308 CAMK2N1Q7Z7J9 78 aa3.2□□□□□ -1.9
COMMD9-207ENST00000533308 UQCR11O14957 56 aa3.19□□□□□ -1.9
COMMD9-207ENST00000533308 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
COMMD9-207ENST00000533308 KRTAP9-7A8MTY7 169 aa3.18□□□□□ -1.9
COMMD9-207ENST00000533308 MIR22HGQ0VDD5 57 aa3.17□□□□□ -1.9
COMMD9-207ENST00000533308 MACF1Q9UPN3 7388 aaKnown RBP3.15□□□□□ -1.9
COMMD9-207ENST00000533308 KRTAP4-8A0A0G2JLE6 195 aa3.15□□□□□ -1.91
COMMD9-207ENST00000533308 KRTAP4-8Q9BYQ9 185 aa3.15□□□□□ -1.91
COMMD9-207ENST00000533308 KRTAP10-12P60413 245 aa3.14□□□□□ -1.91
COMMD9-207ENST00000533308 A6NED7 52 aa3.12□□□□□ -1.91
COMMD9-207ENST00000533308 KMT2DO14686 5537 aa3.11□□□□□ -1.91
COMMD9-207ENST00000533308 KRTAP6-3Q3LI67 103 aa3.11□□□□□ -1.91
COMMD9-207ENST00000533308 C10orf95Q9H7T3 257 aa3.1□□□□□ -1.91
COMMD9-207ENST00000533308 SYNE2Q8WXH0 6885 aaKnown RBP3.09□□□□□ -1.92
COMMD9-207ENST00000533308 KRTAP5-9P26371 169 aa3.07□□□□□ -1.92
COMMD9-207ENST00000533308 KRTAP8-1Q8IUC2 63 aa3.07□□□□□ -1.92
COMMD9-207ENST00000533308 SPRR2FQ96RM1 72 aa3.04□□□□□ -1.92
COMMD9-207ENST00000533308 KRTAP4-12Q9BQ66 201 aa3.03□□□□□ -1.92
COMMD9-207ENST00000533308 CDC42SE1Q9NRR8 79 aa3.02□□□□□ -1.93
COMMD9-207ENST00000533308 K7ERS5 55 aa3□□□□□ -1.93
COMMD9-207ENST00000533308 TNP1P09430 55 aa2.99□□□□□ -1.93
COMMD9-207ENST00000533308 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
COMMD9-207ENST00000533308 KRTAP19-7Q3SYF9 63 aa2.97□□□□□ -1.93
COMMD9-207ENST00000533308 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
COMMD9-207ENST00000533308 MUC12Q9UKN1 5478 aa2.96□□□□□ -1.94
COMMD9-207ENST00000533308 SPRR2EP22531 72 aa2.95□□□□□ -1.94
COMMD9-207ENST00000533308 SPRR2BP35325 72 aa2.95□□□□□ -1.94
COMMD9-207ENST00000533308 SPRR2AP35326 72 aa2.95□□□□□ -1.94
COMMD9-207ENST00000533308 KRTAP19-5Q3LI72 72 aa2.95□□□□□ -1.94
COMMD9-207ENST00000533308 LCE1AQ5T7P2 110 aa2.94□□□□□ -1.94
COMMD9-207ENST00000533308 MT1EP04732 61 aa2.93□□□□□ -1.94
COMMD9-207ENST00000533308 BRK1Q8WUW1 75 aa2.93□□□□□ -1.94
COMMD9-207ENST00000533308 KRTAP9-9Q9BYP9 154 aa2.93□□□□□ -1.94
COMMD9-207ENST00000533308 KRTAP9-4Q9BYQ2 154 aa2.93□□□□□ -1.94
COMMD9-207ENST00000533308 KRTAP25-1Q3LHN0 102 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms