RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 S4R3F8 94 aa7.23□□□□□ -1.25
NXF1-214ENST00000533048 LCA10Q71F78 164 aa7.21□□□□□ -1.26
NXF1-214ENST00000533048 KRTAP3-3Q9BYR6 98 aa7.19□□□□□ -1.26
NXF1-214ENST00000533048 COA5Q86WW8 74 aa7.18□□□□□ -1.26
NXF1-214ENST00000533048 LCE2AQ5TA79 106 aaPredicted RBP7.16□□□□□ -1.26
NXF1-214ENST00000533048 CHKB-CPT1BH3BT56 60 aa7.12□□□□□ -1.27
NXF1-214ENST00000533048 CSAG1Q6PB30 78 aa7.1□□□□□ -1.27
NXF1-214ENST00000533048 SERP1Q9Y6X1 66 aa7.09□□□□□ -1.27
NXF1-214ENST00000533048 SPTSSBQ8NFR3 76 aa7.08□□□□□ -1.28
NXF1-214ENST00000533048 M0R2T5 61 aa7.07□□□□□ -1.28
NXF1-214ENST00000533048 KRTAP10-6P60371 365 aaPredicted RBP7.01□□□□□ -1.29
NXF1-214ENST00000533048 H0YAA0 97 aa6.99□□□□□ -1.29
NXF1-214ENST00000533048 LORP23490 312 aaPredicted RBP6.99□□□□□ -1.29
NXF1-214ENST00000533048 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
NXF1-214ENST00000533048 KRTAP9-8Q9BYQ0 159 aa6.95□□□□□ -1.3
NXF1-214ENST00000533048 MT2AP02795 61 aa6.9□□□□□ -1.3
NXF1-214ENST00000533048 SMIM26A0A096LP01 95 aa6.87□□□□□ -1.31
NXF1-214ENST00000533048 KRTAP3-2Q9BYR7 98 aa6.87□□□□□ -1.31
NXF1-214ENST00000533048 ADM2Q7Z4H4 148 aa6.86□□□□□ -1.31
NXF1-214ENST00000533048 MT1FP04733 61 aa6.85□□□□□ -1.31
NXF1-214ENST00000533048 LINC01558Q9Y6Z2 57 aa6.85□□□□□ -1.31
NXF1-214ENST00000533048 P0C880 135 aa6.81□□□□□ -1.32
NXF1-214ENST00000533048 SEC61GP60059 68 aa6.8□□□□□ -1.32
NXF1-214ENST00000533048 Q1T7F1 81 aa6.8□□□□□ -1.32
NXF1-214ENST00000533048 V9GYY9 64 aa6.8□□□□□ -1.32
NXF1-214ENST00000533048 KRTAP10-10P60014 251 aa6.79□□□□□ -1.32
NXF1-214ENST00000533048 A0A1B0GU69 56 aa6.78□□□□□ -1.32
NXF1-214ENST00000533048 CRIPTQ9P021 101 aa6.76□□□□□ -1.33
NXF1-214ENST00000533048 PRR15LQ9BU68 103 aa6.74□□□□□ -1.33
NXF1-214ENST00000533048 KRTAP9-3Q9BYQ3 159 aa6.71□□□□□ -1.34
NXF1-214ENST00000533048 SPRR2GQ9BYE4 73 aa6.68□□□□□ -1.34
NXF1-214ENST00000533048 A0A1B0GU33 70 aa6.66□□□□□ -1.34
NXF1-214ENST00000533048 KRTAP19-1Q8IUB9 90 aa6.66□□□□□ -1.34
NXF1-214ENST00000533048 M0QZ58 72 aa6.65□□□□□ -1.34
NXF1-214ENST00000533048 R4GN34 69 aa6.65□□□□□ -1.34
NXF1-214ENST00000533048 PSPHP1O15172 72 aa6.63□□□□□ -1.35
NXF1-214ENST00000533048 Q5VV11 94 aa6.62□□□□□ -1.35
NXF1-214ENST00000533048 KRTAP13-4Q3LI77 160 aa6.6□□□□□ -1.35
NXF1-214ENST00000533048 LCE2DQ5TA82 110 aaPredicted RBP6.59□□□□□ -1.35
NXF1-214ENST00000533048 UQCR11O14957 56 aa6.55□□□□□ -1.36
NXF1-214ENST00000533048 LCE2BO14633 110 aa6.54□□□□□ -1.36
NXF1-214ENST00000533048 KRTAP19-8Q3LI54 63 aa6.54□□□□□ -1.36
NXF1-214ENST00000533048 SPATA8Q6RVD6 105 aa6.53□□□□□ -1.36
NXF1-214ENST00000533048 A6NN06 94 aa6.47□□□□□ -1.37
NXF1-214ENST00000533048 MT1BP07438 61 aa6.45□□□□□ -1.38
NXF1-214ENST00000533048 LINC01554Q52M75 96 aa6.45□□□□□ -1.38
NXF1-214ENST00000533048 A6NED7 52 aa6.44□□□□□ -1.38
NXF1-214ENST00000533048 MIR22HGQ0VDD5 57 aa6.44□□□□□ -1.38
NXF1-214ENST00000533048 A8MU10 97 aa6.41□□□□□ -1.38
NXF1-214ENST00000533048 KRTAP9-2Q9BYQ4 174 aa6.41□□□□□ -1.38
NXF1-214ENST00000533048 A0A0D9SG42 100 aa6.4□□□□□ -1.38
NXF1-214ENST00000533048 USH2AO75445 5202 aa6.38□□□□□ -1.39
NXF1-214ENST00000533048 KRTAP12-1P59990 96 aa6.35□□□□□ -1.39
NXF1-214ENST00000533048 CDC42SE1Q9NRR8 79 aa6.34□□□□□ -1.39
NXF1-214ENST00000533048 PLAC4Q8WY50 150 aa6.33□□□□□ -1.4
NXF1-214ENST00000533048 KRTAP12-2P59991 146 aa6.3□□□□□ -1.4
NXF1-214ENST00000533048 SPINT4Q6UDR6 99 aa6.26□□□□□ -1.41
NXF1-214ENST00000533048 KRTAP19-6Q3LI70 58 aa6.23□□□□□ -1.41
NXF1-214ENST00000533048 SSPOA2VEC9 5147 aa6.22□□□□□ -1.41
NXF1-214ENST00000533048 FSIP2Q5CZC0 6907 aa6.21□□□□□ -1.42
NXF1-214ENST00000533048 K7ERS5 55 aa6.19□□□□□ -1.42
NXF1-214ENST00000533048 MT1XP80297 61 aa6.19□□□□□ -1.42
NXF1-214ENST00000533048 BRK1Q8WUW1 75 aa6.19□□□□□ -1.42
NXF1-214ENST00000533048 KRTAP10-5P60370 271 aa6.18□□□□□ -1.42
NXF1-214ENST00000533048 CAMK2N1Q7Z7J9 78 aa6.18□□□□□ -1.42
NXF1-214ENST00000533048 CRCT1Q9UGL9 99 aa6.15□□□□□ -1.42
NXF1-214ENST00000533048 PRO2289Q9P1D8 64 aa6.14□□□□□ -1.43
NXF1-214ENST00000533048 C10orf95Q9H7T3 257 aa6.02□□□□□ -1.45
NXF1-214ENST00000533048 FCGBPQ9Y6R7 5405 aaPredicted RBP6□□□□□ -1.45
NXF1-214ENST00000533048 KRTAP9-6A0A140TA67 174 aa6□□□□□ -1.45
NXF1-214ENST00000533048 PRO0628Q9UI54 55 aa5.98□□□□□ -1.45
NXF1-214ENST00000533048 ROMO1P60602 79 aa5.91□□□□□ -1.46
NXF1-214ENST00000533048 KRTAP10-7P60409 375 aaPredicted RBP5.89□□□□□ -1.47
NXF1-214ENST00000533048 KRTAP10-12P60413 245 aa5.89□□□□□ -1.47
NXF1-214ENST00000533048 TNP1P09430 55 aa5.87□□□□□ -1.47
NXF1-214ENST00000533048 PMAIP1Q13794 54 aa5.85□□□□□ -1.47
NXF1-214ENST00000533048 KRTAP25-1Q3LHN0 102 aa5.85□□□□□ -1.47
NXF1-214ENST00000533048 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
NXF1-214ENST00000533048 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.71□□□□□ -1.5
NXF1-214ENST00000533048 KRTAP4-8A0A0G2JLE6 195 aa5.7□□□□□ -1.5
NXF1-214ENST00000533048 KRTAP4-8Q9BYQ9 185 aa5.7□□□□□ -1.5
NXF1-214ENST00000533048 KRTAP23-1A1A580 65 aa5.69□□□□□ -1.5
NXF1-214ENST00000533048 LCE3AQ5TA76 89 aa5.66□□□□□ -1.5
NXF1-214ENST00000533048 KMT2DO14686 5537 aa5.66□□□□□ -1.5
NXF1-214ENST00000533048 KRTAP8-1Q8IUC2 63 aa5.63□□□□□ -1.51
NXF1-214ENST00000533048 PP632Q6XCG6 107 aa5.6□□□□□ -1.51
NXF1-214ENST00000533048 KTN1-AS1Q86SY8 53 aa5.57□□□□□ -1.52
NXF1-214ENST00000533048 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
NXF1-214ENST00000533048 SYNE2Q8WXH0 6885 aaKnown RBP5.55□□□□□ -1.52
NXF1-214ENST00000533048 KRTAP6-3Q3LI67 103 aa5.53□□□□□ -1.52
NXF1-214ENST00000533048 KRTAP19-7Q3SYF9 63 aa5.53□□□□□ -1.52
NXF1-214ENST00000533048 KRTAP19-5Q3LI72 72 aa5.5□□□□□ -1.53
NXF1-214ENST00000533048 PRAC1Q96KF2 57 aa5.48□□□□□ -1.53
NXF1-214ENST00000533048 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
NXF1-214ENST00000533048 SPRR2FQ96RM1 72 aa5.46□□□□□ -1.54
NXF1-214ENST00000533048 KRTAP9-7A8MTY7 169 aa5.45□□□□□ -1.54
NXF1-214ENST00000533048 MT1EP04732 61 aa5.44□□□□□ -1.54
NXF1-214ENST00000533048 MUC12Q9UKN1 5478 aa5.33□□□□□ -1.56
NXF1-214ENST00000533048 KRTAP15-1Q3LI76 137 aa5.29□□□□□ -1.56
NXF1-214ENST00000533048 LCE1AQ5T7P2 110 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms