RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 A8MUN3 132 aa9.82□□□□□ -0.84
CCS-207ENST00000531990 KRTAP9-3Q9BYQ3 159 aa9.77□□□□□ -0.85
CCS-207ENST00000531990 KRTAP3-3Q9BYR6 98 aa9.71□□□□□ -0.86
CCS-207ENST00000531990 NDUFC1O43677 76 aa9.69□□□□□ -0.86
CCS-207ENST00000531990 LCE2BO14633 110 aa9.63□□□□□ -0.87
CCS-207ENST00000531990 DMAC1Q96GE9 116 aa9.63□□□□□ -0.87
CCS-207ENST00000531990 SERP2Q8N6R1 65 aa9.62□□□□□ -0.87
CCS-207ENST00000531990 SNURFQ9Y675 71 aa9.58□□□□□ -0.88
CCS-207ENST00000531990 C20orf197Q8N268 126 aa9.54□□□□□ -0.88
CCS-207ENST00000531990 USH2AO75445 5202 aa9.52□□□□□ -0.89
CCS-207ENST00000531990 ACYP2P14621 99 aa9.5□□□□□ -0.89
CCS-207ENST00000531990 H0YAA0 97 aa9.48□□□□□ -0.89
CCS-207ENST00000531990 SSPOA2VEC9 5147 aa9.47□□□□□ -0.89
CCS-207ENST00000531990 SPANXA2-OT1Q8N9U9 137 aa9.42□□□□□ -0.9
CCS-207ENST00000531990 CRIPTQ9P021 101 aa9.42□□□□□ -0.9
CCS-207ENST00000531990 COX7CP15954 63 aa9.41□□□□□ -0.9
CCS-207ENST00000531990 KRTAP19-1Q8IUB9 90 aa9.41□□□□□ -0.9
CCS-207ENST00000531990 ADM2Q7Z4H4 148 aa9.4□□□□□ -0.9
CCS-207ENST00000531990 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.38□□□□□ -0.91
CCS-207ENST00000531990 SPRR2GQ9BYE4 73 aa9.37□□□□□ -0.91
CCS-207ENST00000531990 CHKB-CPT1BH3BT56 60 aa9.35□□□□□ -0.91
CCS-207ENST00000531990 SPTSSBQ8NFR3 76 aa9.35□□□□□ -0.91
CCS-207ENST00000531990 KRTAP9-7A8MTY7 169 aa9.33□□□□□ -0.92
CCS-207ENST00000531990 FCGBPQ9Y6R7 5405 aaPredicted RBP9.3□□□□□ -0.92
CCS-207ENST00000531990 ANAPC13Q9BS18 74 aa9.28□□□□□ -0.92
CCS-207ENST00000531990 KRTAP19-6Q3LI70 58 aa9.27□□□□□ -0.93
CCS-207ENST00000531990 Q5VV11 94 aa9.27□□□□□ -0.93
CCS-207ENST00000531990 KRTAP19-8Q3LI54 63 aa9.26□□□□□ -0.93
CCS-207ENST00000531990 MT1BP07438 61 aa9.19□□□□□ -0.94
CCS-207ENST00000531990 P0C880 135 aa9.19□□□□□ -0.94
CCS-207ENST00000531990 H7BZZ5 65 aa9.17□□□□□ -0.94
CCS-207ENST00000531990 KRTAP3-2Q9BYR7 98 aa9.15□□□□□ -0.94
CCS-207ENST00000531990 R4GN34 69 aa9.15□□□□□ -0.94
CCS-207ENST00000531990 CYSTM1Q9H1C7 97 aa9.14□□□□□ -0.95
CCS-207ENST00000531990 COA5Q86WW8 74 aa9.13□□□□□ -0.95
CCS-207ENST00000531990 M0QZ58 72 aa9.09□□□□□ -0.95
CCS-207ENST00000531990 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
CCS-207ENST00000531990 MACF1Q9UPN3 7388 aaKnown RBP9.02□□□□□ -0.96
CCS-207ENST00000531990 A6NN06 94 aa9.02□□□□□ -0.97
CCS-207ENST00000531990 SYNE2Q8WXH0 6885 aaKnown RBP9□□□□□ -0.97
CCS-207ENST00000531990 PLAC4Q8WY50 150 aa8.96□□□□□ -0.98
CCS-207ENST00000531990 LINC01554Q52M75 96 aa8.94□□□□□ -0.98
CCS-207ENST00000531990 KRTAP10-5P60370 271 aa8.93□□□□□ -0.98
CCS-207ENST00000531990 SEC61GP60059 68 aa8.9□□□□□ -0.98
CCS-207ENST00000531990 ATP5EP56381 51 aaPredicted RBP8.89□□□□□ -0.99
CCS-207ENST00000531990 SERP1Q9Y6X1 66 aa8.87□□□□□ -0.99
CCS-207ENST00000531990 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
CCS-207ENST00000531990 TMEM258P61165 79 aa8.77□□□□□ -1.01
CCS-207ENST00000531990 MT1XP80297 61 aa8.7□□□□□ -1.02
CCS-207ENST00000531990 KRTAP13-4Q3LI77 160 aa8.7□□□□□ -1.02
CCS-207ENST00000531990 A0A1B0GU69 56 aa8.68□□□□□ -1.02
CCS-207ENST00000531990 KRTAP6-3Q3LI67 103 aa8.68□□□□□ -1.02
CCS-207ENST00000531990 A0A1B0GU33 70 aa8.67□□□□□ -1.02
CCS-207ENST00000531990 SPATA8Q6RVD6 105 aa8.57□□□□□ -1.04
CCS-207ENST00000531990 PRR15LQ9BU68 103 aa8.56□□□□□ -1.04
CCS-207ENST00000531990 A0A0D9SG42 100 aa8.54□□□□□ -1.04
CCS-207ENST00000531990 NEBP20929 6669 aa8.52□□□□□ -1.05
CCS-207ENST00000531990 CAMK2N1Q7Z7J9 78 aa8.5□□□□□ -1.05
CCS-207ENST00000531990 LINC01558Q9Y6Z2 57 aa8.49□□□□□ -1.05
CCS-207ENST00000531990 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
CCS-207ENST00000531990 SMIM26A0A096LP01 95 aa8.45□□□□□ -1.06
CCS-207ENST00000531990 SPINT4Q6UDR6 99 aa8.41□□□□□ -1.06
CCS-207ENST00000531990 MUC12Q9UKN1 5478 aa8.39□□□□□ -1.07
CCS-207ENST00000531990 KRTAP12-1P59990 96 aa8.35□□□□□ -1.07
CCS-207ENST00000531990 KRTAP5-9P26371 169 aa8.32□□□□□ -1.08
CCS-207ENST00000531990 KRTAP10-7P60409 375 aaPredicted RBP8.32□□□□□ -1.08
CCS-207ENST00000531990 A8MU10 97 aa8.31□□□□□ -1.08
CCS-207ENST00000531990 PCP4P48539 62 aa8.3□□□□□ -1.08
CCS-207ENST00000531990 KRTAP8-1Q8IUC2 63 aa8.29□□□□□ -1.08
CCS-207ENST00000531990 KRTAP10-12P60413 245 aa8.28□□□□□ -1.08
CCS-207ENST00000531990 V9GYY9 64 aa8.26□□□□□ -1.09
CCS-207ENST00000531990 UQCR11O14957 56 aa8.25□□□□□ -1.09
CCS-207ENST00000531990 KRTAP4-8A0A0G2JLE6 195 aa8.21□□□□□ -1.1
CCS-207ENST00000531990 KRTAP4-8Q9BYQ9 185 aa8.21□□□□□ -1.1
CCS-207ENST00000531990 SPRR2FQ96RM1 72 aa8.19□□□□□ -1.1
CCS-207ENST00000531990 Q1T7F1 81 aa8.17□□□□□ -1.1
CCS-207ENST00000531990 KMT2DO14686 5537 aa8.17□□□□□ -1.1
CCS-207ENST00000531990 MDN1Q9NU22 5596 aa8.16□□□□□ -1.1
CCS-207ENST00000531990 KRTAP20-1Q3LI63 56 aa8.13□□□□□ -1.11
CCS-207ENST00000531990 PSPHP1O15172 72 aa8.12□□□□□ -1.11
CCS-207ENST00000531990 MIR22HGQ0VDD5 57 aa8.09□□□□□ -1.11
CCS-207ENST00000531990 RPS28P62857 69 aaKnown RBP8.06□□□□□ -1.12
CCS-207ENST00000531990 SPRR2EP22531 72 aa7.99□□□□□ -1.13
CCS-207ENST00000531990 SPRR2BP35325 72 aa7.99□□□□□ -1.13
CCS-207ENST00000531990 SPRR2AP35326 72 aa7.99□□□□□ -1.13
CCS-207ENST00000531990 C10orf95Q9H7T3 257 aa7.94□□□□□ -1.14
CCS-207ENST00000531990 K7ERS5 55 aa7.93□□□□□ -1.14
CCS-207ENST00000531990 TNP1P09430 55 aa7.91□□□□□ -1.14
CCS-207ENST00000531990 A6NED7 52 aa7.9□□□□□ -1.14
CCS-207ENST00000531990 LCE1AQ5T7P2 110 aa7.9□□□□□ -1.14
CCS-207ENST00000531990 KRTAP2-3P0C7H8 128 aa7.86□□□□□ -1.15
CCS-207ENST00000531990 KRTAP2-4Q9BYR9 128 aa7.86□□□□□ -1.15
CCS-207ENST00000531990 KRTAP19-7Q3SYF9 63 aa7.76□□□□□ -1.17
CCS-207ENST00000531990 SPRR2DP22532 72 aa7.73□□□□□ -1.17
CCS-207ENST00000531990 MT1EP04732 61 aa7.7□□□□□ -1.18
CCS-207ENST00000531990 LCE3AQ5TA76 89 aa7.7□□□□□ -1.18
CCS-207ENST00000531990 KRTAP19-5Q3LI72 72 aa7.69□□□□□ -1.18
CCS-207ENST00000531990 KRTAP25-1Q3LHN0 102 aa7.63□□□□□ -1.19
CCS-207ENST00000531990 KRTAP2-2Q9BYT5 123 aa7.59□□□□□ -1.19
CCS-207ENST00000531990 KRTAP2-1Q9BYU5 128 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms