RNA–Protein interactions for RNA: ENST00000531351.1

NDUFS3-209, Transcript of NADH:ubiquinone oxidoreductase core subunit S3, humanhuman

TSL 5

Gene NDUFS3, Length 423 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3-209ENST00000531351 LINC00208Q96KT6 92 aa7.13□□□□□ -1.27
NDUFS3-209ENST00000531351 KLKP1Q107X0 134 aa7.12□□□□□ -1.27
NDUFS3-209ENST00000531351 MACF1Q9UPN3 7388 aaKnown RBP7.11□□□□□ -1.27
NDUFS3-209ENST00000531351 SCGB1A1P11684 91 aa7.09□□□□□ -1.27
NDUFS3-209ENST00000531351 MP68P56378 58 aa7.09□□□□□ -1.27
NDUFS3-209ENST00000531351 C5orf47Q569G3 176 aa7.09□□□□□ -1.27
NDUFS3-209ENST00000531351 LCA10Q71F78 164 aa7.09□□□□□ -1.27
NDUFS3-209ENST00000531351 S4R3F8 94 aa7.09□□□□□ -1.27
NDUFS3-209ENST00000531351 FAM236AA0A1B0GUQ0 79 aa7.08□□□□□ -1.28
NDUFS3-209ENST00000531351 FAM236BA0A1B0GV22 79 aa7.08□□□□□ -1.28
NDUFS3-209ENST00000531351 H3BPC8 53 aa7.03□□□□□ -1.28
NDUFS3-209ENST00000531351 TRAV7A0A075B6U4 112 aa6.99□□□□□ -1.29
NDUFS3-209ENST00000531351 SYNE2Q8WXH0 6885 aaKnown RBP6.99□□□□□ -1.29
NDUFS3-209ENST00000531351 CSAG1Q6PB30 78 aa6.97□□□□□ -1.29
NDUFS3-209ENST00000531351 SMIM20Q8N5G0 67 aa6.96□□□□□ -1.3
NDUFS3-209ENST00000531351 A8MUN3 132 aa6.95□□□□□ -1.3
NDUFS3-209ENST00000531351 KRTAP6-3Q3LI67 103 aa6.93□□□□□ -1.3
NDUFS3-209ENST00000531351 DMAC1Q96GE9 116 aa6.9□□□□□ -1.3
NDUFS3-209ENST00000531351 NDUFC1O43677 76 aa6.85□□□□□ -1.31
NDUFS3-209ENST00000531351 SERP2Q8N6R1 65 aa6.85□□□□□ -1.31
NDUFS3-209ENST00000531351 SNURFQ9Y675 71 aa6.85□□□□□ -1.31
NDUFS3-209ENST00000531351 C20orf197Q8N268 126 aa6.8□□□□□ -1.32
NDUFS3-209ENST00000531351 A6NN06 94 aa6.79□□□□□ -1.32
NDUFS3-209ENST00000531351 MT1BP07438 61 aa6.79□□□□□ -1.32
NDUFS3-209ENST00000531351 H0YAA0 97 aa6.78□□□□□ -1.32
NDUFS3-209ENST00000531351 KRTAP4-8Q9BYQ9 185 aa6.77□□□□□ -1.33
NDUFS3-209ENST00000531351 Q5VV11 94 aa6.76□□□□□ -1.33
NDUFS3-209ENST00000531351 SPRR2GQ9BYE4 73 aa6.76□□□□□ -1.33
NDUFS3-209ENST00000531351 KRTAP19-8Q3LI54 63 aa6.73□□□□□ -1.33
NDUFS3-209ENST00000531351 COX7CP15954 63 aa6.72□□□□□ -1.33
NDUFS3-209ENST00000531351 ACYP2P14621 99 aa6.71□□□□□ -1.34
NDUFS3-209ENST00000531351 ADM2Q7Z4H4 148 aa6.71□□□□□ -1.34
NDUFS3-209ENST00000531351 SPANXA2-OT1Q8N9U9 137 aa6.7□□□□□ -1.34
NDUFS3-209ENST00000531351 CYSTM1Q9H1C7 97 aa6.68□□□□□ -1.34
NDUFS3-209ENST00000531351 KRTAP10-5P60370 271 aa6.67□□□□□ -1.34
NDUFS3-209ENST00000531351 CRIPTQ9P021 101 aa6.66□□□□□ -1.34
NDUFS3-209ENST00000531351 P0C880 135 aa6.64□□□□□ -1.35
NDUFS3-209ENST00000531351 MUC12Q9UKN1 5478 aa6.63□□□□□ -1.35
NDUFS3-209ENST00000531351 NEBP20929 6669 aa6.61□□□□□ -1.35
NDUFS3-209ENST00000531351 H7BZZ5 65 aa6.59□□□□□ -1.35
NDUFS3-209ENST00000531351 ANAPC13Q9BS18 74 aa6.58□□□□□ -1.36
NDUFS3-209ENST00000531351 CHKB-CPT1BH3BT56 60 aa6.57□□□□□ -1.36
NDUFS3-209ENST00000531351 KRTAP20-1Q3LI63 56 aa6.54□□□□□ -1.36
NDUFS3-209ENST00000531351 KRTAP5-9P26371 169 aa6.53□□□□□ -1.36
NDUFS3-209ENST00000531351 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
NDUFS3-209ENST00000531351 KRTAP4-12Q9BQ66 201 aa6.53□□□□□ -1.36
NDUFS3-209ENST00000531351 COA5Q86WW8 74 aa6.52□□□□□ -1.37
NDUFS3-209ENST00000531351 CCDC179H3BU77 68 aa6.51□□□□□ -1.37
NDUFS3-209ENST00000531351 R4GN34 69 aa6.48□□□□□ -1.37
NDUFS3-209ENST00000531351 M0QZ58 72 aa6.47□□□□□ -1.37
NDUFS3-209ENST00000531351 KMT2DO14686 5537 aa6.45□□□□□ -1.38
NDUFS3-209ENST00000531351 MDN1Q9NU22 5596 aa6.44□□□□□ -1.38
NDUFS3-209ENST00000531351 LCE3BQ5TA77 95 aa6.44□□□□□ -1.38
NDUFS3-209ENST00000531351 KRTAP13-4Q3LI77 160 aa6.34□□□□□ -1.39
NDUFS3-209ENST00000531351 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
NDUFS3-209ENST00000531351 MT1XP80297 61 aa6.33□□□□□ -1.4
NDUFS3-209ENST00000531351 SPRR2FQ96RM1 72 aa6.33□□□□□ -1.4
NDUFS3-209ENST00000531351 PLAC4Q8WY50 150 aa6.31□□□□□ -1.4
NDUFS3-209ENST00000531351 KRTAP9-9Q9BYP9 154 aa6.31□□□□□ -1.4
NDUFS3-209ENST00000531351 KRTAP9-4Q9BYQ2 154 aa6.31□□□□□ -1.4
NDUFS3-209ENST00000531351 PRO2289Q9P1D8 64 aa6.31□□□□□ -1.4
NDUFS3-209ENST00000531351 KRTAP2-3P0C7H8 128 aa6.3□□□□□ -1.4
NDUFS3-209ENST00000531351 KRTAP2-4Q9BYR9 128 aa6.3□□□□□ -1.4
NDUFS3-209ENST00000531351 SPRR2EP22531 72 aa6.29□□□□□ -1.4
NDUFS3-209ENST00000531351 SPRR2BP35325 72 aa6.29□□□□□ -1.4
NDUFS3-209ENST00000531351 SPRR2AP35326 72 aa6.29□□□□□ -1.4
NDUFS3-209ENST00000531351 ATP5EP56381 51 aaPredicted RBP6.27□□□□□ -1.41
NDUFS3-209ENST00000531351 KRTAP8-1Q8IUC2 63 aa6.23□□□□□ -1.41
NDUFS3-209ENST00000531351 TMEM258P61165 79 aa6.22□□□□□ -1.41
NDUFS3-209ENST00000531351 SEC61GP60059 68 aa6.2□□□□□ -1.42
NDUFS3-209ENST00000531351 SERP1Q9Y6X1 66 aa6.2□□□□□ -1.42
NDUFS3-209ENST00000531351 KRTAP4-8A0A0G2JLE6 195 aa6.19□□□□□ -1.42
NDUFS3-209ENST00000531351 KRTAP12-2P59991 146 aa6.17□□□□□ -1.42
NDUFS3-209ENST00000531351 LCE1AQ5T7P2 110 aa6.16□□□□□ -1.42
NDUFS3-209ENST00000531351 SPATA8Q6RVD6 105 aa6.15□□□□□ -1.42
NDUFS3-209ENST00000531351 A0A1B0GU33 70 aa6.14□□□□□ -1.43
NDUFS3-209ENST00000531351 A0A1B0GU69 56 aa6.13□□□□□ -1.43
NDUFS3-209ENST00000531351 H3BS24 57 aa6.09□□□□□ -1.43
NDUFS3-209ENST00000531351 A0A0D9SG42 100 aa6.08□□□□□ -1.44
NDUFS3-209ENST00000531351 SPRR2DP22532 72 aa6.08□□□□□ -1.44
NDUFS3-209ENST00000531351 KRTAP2-2Q9BYT5 123 aa6.08□□□□□ -1.44
NDUFS3-209ENST00000531351 KRTAP2-1Q9BYU5 128 aa6.08□□□□□ -1.44
NDUFS3-209ENST00000531351 LINC01558Q9Y6Z2 57 aa6.06□□□□□ -1.44
NDUFS3-209ENST00000531351 KRTAP10-7P60409 375 aaPredicted RBP6.05□□□□□ -1.44
NDUFS3-209ENST00000531351 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
NDUFS3-209ENST00000531351 KRTAP12-1P59990 96 aa6.02□□□□□ -1.45
NDUFS3-209ENST00000531351 KRTAP10-12P60413 245 aa6□□□□□ -1.45
NDUFS3-209ENST00000531351 A8MU10 97 aa5.99□□□□□ -1.45
NDUFS3-209ENST00000531351 CAMK2N1Q7Z7J9 78 aa5.98□□□□□ -1.45
NDUFS3-209ENST00000531351 PRR15LQ9BU68 103 aa5.98□□□□□ -1.45
NDUFS3-209ENST00000531351 KRTAP4-7Q9BYR0 210 aa5.97□□□□□ -1.45
NDUFS3-209ENST00000531351 SPINT4Q6UDR6 99 aa5.96□□□□□ -1.46
NDUFS3-209ENST00000531351 KRTAP19-4Q3LI73 84 aa5.95□□□□□ -1.46
NDUFS3-209ENST00000531351 LCE4AQ5TA78 99 aa5.94□□□□□ -1.46
NDUFS3-209ENST00000531351 SMIM26A0A096LP01 95 aa5.93□□□□□ -1.46
NDUFS3-209ENST00000531351 PCP4P48539 62 aa5.91□□□□□ -1.46
NDUFS3-209ENST00000531351 KRTAP4-9Q9BYQ8 210 aa5.86□□□□□ -1.47
NDUFS3-209ENST00000531351 Q1T7F1 81 aa5.82□□□□□ -1.48
NDUFS3-209ENST00000531351 UQCR11O14957 56 aa5.81□□□□□ -1.48
NDUFS3-209ENST00000531351 PSPHP1O15172 72 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms