RNA–Protein interactions for RNA: ENST00000531298.5

PACS1-211, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 4

Gene PACS1, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-211ENST00000531298 PRR4Q16378 134 aa4.12□□□□□ -1.75
PACS1-211ENST00000531298 PCLOQ9Y6V0 5065 aa4.12□□□□□ -1.75
PACS1-211ENST00000531298 IGKV2D-30A0A075B6S6 120 aa4.11□□□□□ -1.75
PACS1-211ENST00000531298 KRTAP3-1Q9BYR8 98 aa4.11□□□□□ -1.75
PACS1-211ENST00000531298 LINC01558Q9Y6Z2 57 aa4.11□□□□□ -1.75
PACS1-211ENST00000531298 FAT1Q14517 4588 aa4.1□□□□□ -1.75
PACS1-211ENST00000531298 SEC61GP60059 68 aa4.08□□□□□ -1.76
PACS1-211ENST00000531298 MPLKIPQ8TAP9 179 aa4.08□□□□□ -1.76
PACS1-211ENST00000531298 MT1HL1P0DM35 61 aa4.06□□□□□ -1.76
PACS1-211ENST00000531298 HSPG2P98160 4391 aa4.05□□□□□ -1.76
PACS1-211ENST00000531298 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
PACS1-211ENST00000531298 CHKB-CPT1BH3BT56 60 aa4.04□□□□□ -1.76
PACS1-211ENST00000531298 RPL37P61927 97 aaKnown RBP4.04□□□□□ -1.76
PACS1-211ENST00000531298 TNXBP22105 4242 aa4.03□□□□□ -1.76
PACS1-211ENST00000531298 Q5VV11 94 aa4.03□□□□□ -1.76
PACS1-211ENST00000531298 ATP11AUNQ6ZP68 121 aa4.03□□□□□ -1.76
PACS1-211ENST00000531298 HERC2O95714 4834 aa4.03□□□□□ -1.76
PACS1-211ENST00000531298 C9orf92A6NGG3 77 aa4.02□□□□□ -1.77
PACS1-211ENST00000531298 SPINK7P58062 85 aa4.02□□□□□ -1.77
PACS1-211ENST00000531298 TPRXLQ17RH7 258 aa4.02□□□□□ -1.77
PACS1-211ENST00000531298 PRR15LQ9BU68 103 aa4.02□□□□□ -1.77
PACS1-211ENST00000531298 DMBT1Q9UGM3 2413 aaPredicted RBP4.02□□□□□ -1.77
PACS1-211ENST00000531298 RETNLBQ9BQ08 111 aa4.01□□□□□ -1.77
PACS1-211ENST00000531298 PSPHP1O15172 72 aa3.99□□□□□ -1.77
PACS1-211ENST00000531298 COX6B2Q6YFQ2 88 aa3.99□□□□□ -1.77
PACS1-211ENST00000531298 FAT3Q8TDW7 4589 aa3.97□□□□□ -1.77
PACS1-211ENST00000531298 BRK1Q8WUW1 75 aa3.97□□□□□ -1.77
PACS1-211ENST00000531298 CDC42SE1Q9NRR8 79 aa3.96□□□□□ -1.78
PACS1-211ENST00000531298 A0A1B0GU69 56 aa3.95□□□□□ -1.78
PACS1-211ENST00000531298 KRTAP23-1A1A580 65 aa3.95□□□□□ -1.78
PACS1-211ENST00000531298 LRP1Q07954 4544 aaKnown RBP3.93□□□□□ -1.78
PACS1-211ENST00000531298 A6NED7 52 aa3.92□□□□□ -1.78
PACS1-211ENST00000531298 PMAIP1Q13794 54 aa3.92□□□□□ -1.78
PACS1-211ENST00000531298 UBR4Q5T4S7 5183 aa3.91□□□□□ -1.78
PACS1-211ENST00000531298 UQCR11O14957 56 aa3.9□□□□□ -1.79
PACS1-211ENST00000531298 SPATA8Q6RVD6 105 aa3.89□□□□□ -1.79
PACS1-211ENST00000531298 KIAA1109Q2LD37 5005 aa3.88□□□□□ -1.79
PACS1-211ENST00000531298 LCA10Q71F78 164 aa3.88□□□□□ -1.79
PACS1-211ENST00000531298 SEC61BP60468 96 aaKnown RBP3.87□□□□□ -1.79
PACS1-211ENST00000531298 H1FX-AS1Q4G0G2 97 aa3.85□□□□□ -1.79
PACS1-211ENST00000531298 RBM12B-AS1Q9P1G2 102 aa3.84□□□□□ -1.79
PACS1-211ENST00000531298 MIR22HGQ0VDD5 57 aa3.83□□□□□ -1.8
PACS1-211ENST00000531298 HERC1Q15751 4861 aa3.83□□□□□ -1.8
PACS1-211ENST00000531298 MYCBP2O75592 4640 aa3.81□□□□□ -1.8
PACS1-211ENST00000531298 S4R3F8 94 aa3.81□□□□□ -1.8
PACS1-211ENST00000531298 ABCA13Q86UQ4 5058 aa3.8□□□□□ -1.8
PACS1-211ENST00000531298 KTN1-AS1Q86SY8 53 aa3.8□□□□□ -1.8
PACS1-211ENST00000531298 A0A1B0GU33 70 aa3.79□□□□□ -1.8
PACS1-211ENST00000531298 A6NN06 94 aa3.78□□□□□ -1.8
PACS1-211ENST00000531298 H0YAA0 97 aa3.78□□□□□ -1.8
PACS1-211ENST00000531298 CSAG1Q6PB30 78 aa3.76□□□□□ -1.81
PACS1-211ENST00000531298 A8MU10 97 aa3.74□□□□□ -1.81
PACS1-211ENST00000531298 KRTAP10-6P60371 365 aaPredicted RBP3.72□□□□□ -1.81
PACS1-211ENST00000531298 LRP2P98164 4655 aa3.7□□□□□ -1.82
PACS1-211ENST00000531298 K7ERS5 55 aa3.69□□□□□ -1.82
PACS1-211ENST00000531298 M0QZ58 72 aa3.69□□□□□ -1.82
PACS1-211ENST00000531298 KRTAP15-1Q3LI76 137 aa3.69□□□□□ -1.82
PACS1-211ENST00000531298 MUC17Q685J3 4493 aa3.68□□□□□ -1.82
PACS1-211ENST00000531298 KRTAP19-2Q3LHN2 52 aa3.65□□□□□ -1.83
PACS1-211ENST00000531298 ADM2Q7Z4H4 148 aa3.62□□□□□ -1.83
PACS1-211ENST00000531298 KRTAP4-1Q9BYQ7 146 aa3.62□□□□□ -1.83
PACS1-211ENST00000531298 P0C880 135 aa3.6□□□□□ -1.83
PACS1-211ENST00000531298 LPAP08519 4548 aa3.6□□□□□ -1.83
PACS1-211ENST00000531298 CRIPTQ9P021 101 aa3.58□□□□□ -1.84
PACS1-211ENST00000531298 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
PACS1-211ENST00000531298 LINC01554Q52M75 96 aa3.54□□□□□ -1.84
PACS1-211ENST00000531298 ROMO1P60602 79 aa3.52□□□□□ -1.85
PACS1-211ENST00000531298 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.52□□□□□ -1.85
PACS1-211ENST00000531298 R4GN34 69 aa3.52□□□□□ -1.85
PACS1-211ENST00000531298 FLGP20930 4061 aaPredicted RBP3.52□□□□□ -1.85
PACS1-211ENST00000531298 KRTAP12-1P59990 96 aa3.5□□□□□ -1.85
PACS1-211ENST00000531298 A0A0A0MQY5 61 aa3.48□□□□□ -1.85
PACS1-211ENST00000531298 HMCN2Q8NDA2 5059 aa3.48□□□□□ -1.85
PACS1-211ENST00000531298 A0A0D9SG42 100 aa3.47□□□□□ -1.85
PACS1-211ENST00000531298 KRTAP12-2P59991 146 aa3.46□□□□□ -1.86
PACS1-211ENST00000531298 RNF213Q63HN8 5207 aa3.45□□□□□ -1.86
PACS1-211ENST00000531298 KRTAP25-1Q3LHN0 102 aa3.45□□□□□ -1.86
PACS1-211ENST00000531298 PRAC1Q96KF2 57 aa3.43□□□□□ -1.86
PACS1-211ENST00000531298 SPINT4Q6UDR6 99 aa3.41□□□□□ -1.86
PACS1-211ENST00000531298 MT1HP80294 61 aa3.39□□□□□ -1.87
PACS1-211ENST00000531298 SPRR2GQ9BYE4 73 aa3.39□□□□□ -1.87
PACS1-211ENST00000531298 MUC2Q02817 5179 aa3.39□□□□□ -1.87
PACS1-211ENST00000531298 FAT4Q6V0I7 4981 aa3.32□□□□□ -1.88
PACS1-211ENST00000531298 M0R2T5 61 aa3.32□□□□□ -1.88
PACS1-211ENST00000531298 PP632Q6XCG6 107 aa3.32□□□□□ -1.88
PACS1-211ENST00000531298 LCE1AQ5T7P2 110 aa3.3□□□□□ -1.88
PACS1-211ENST00000531298 MT2AP02795 61 aa3.29□□□□□ -1.88
PACS1-211ENST00000531298 KRTAP19-8Q3LI54 63 aa3.29□□□□□ -1.88
PACS1-211ENST00000531298 KRTAP5-11Q6L8G4 156 aa3.29□□□□□ -1.88
PACS1-211ENST00000531298 CAMK2N1Q7Z7J9 78 aa3.29□□□□□ -1.88
PACS1-211ENST00000531298 C10orf95Q9H7T3 257 aa3.29□□□□□ -1.88
PACS1-211ENST00000531298 PLAC4Q8WY50 150 aa3.27□□□□□ -1.89
PACS1-211ENST00000531298 MT1FP04733 61 aa3.25□□□□□ -1.89
PACS1-211ENST00000531298 KRTAP10-10P60014 251 aa3.24□□□□□ -1.89
PACS1-211ENST00000531298 TNP1P09430 55 aa3.23□□□□□ -1.89
PACS1-211ENST00000531298 KRTAP10-7P60409 375 aaPredicted RBP3.19□□□□□ -1.9
PACS1-211ENST00000531298 MT1BP07438 61 aa3.15□□□□□ -1.91
PACS1-211ENST00000531298 FSIP2Q5CZC0 6907 aa3.12□□□□□ -1.91
PACS1-211ENST00000531298 PRO2289Q9P1D8 64 aa3.11□□□□□ -1.91
PACS1-211ENST00000531298 CRCT1Q9UGL9 99 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms