RNA–Protein interactions for RNA: ENST00000531178.1

CDK2AP2-204, Transcript of cyclin dependent kinase 2 associated protein 2, humanhuman

TSL 1 (best)

Gene CDK2AP2, Length 923 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK2AP2-204ENST00000531178 ATP5EP56381 51 aaPredicted RBP7.49□□□□□ -1.21
CDK2AP2-204ENST00000531178 LCA10Q71F78 164 aa7.47□□□□□ -1.21
CDK2AP2-204ENST00000531178 M0R2T5 61 aa7.45□□□□□ -1.22
CDK2AP2-204ENST00000531178 CHKB-CPT1BH3BT56 60 aa7.42□□□□□ -1.22
CDK2AP2-204ENST00000531178 KRTAP3-3Q9BYR6 98 aa7.41□□□□□ -1.22
CDK2AP2-204ENST00000531178 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.22
CDK2AP2-204ENST00000531178 COA5Q86WW8 74 aa7.4□□□□□ -1.22
CDK2AP2-204ENST00000531178 CSAG1Q6PB30 78 aa7.39□□□□□ -1.23
CDK2AP2-204ENST00000531178 SPTSSBQ8NFR3 76 aa7.35□□□□□ -1.23
CDK2AP2-204ENST00000531178 KRTAP10-6P60371 365 aaPredicted RBP7.28□□□□□ -1.24
CDK2AP2-204ENST00000531178 SERP1Q9Y6X1 66 aa7.28□□□□□ -1.24
CDK2AP2-204ENST00000531178 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
CDK2AP2-204ENST00000531178 H0YAA0 97 aa7.19□□□□□ -1.26
CDK2AP2-204ENST00000531178 KRTAP9-8Q9BYQ0 159 aa7.19□□□□□ -1.26
CDK2AP2-204ENST00000531178 MT2AP02795 61 aa7.15□□□□□ -1.26
CDK2AP2-204ENST00000531178 RPS28P62857 69 aaKnown RBP7.14□□□□□ -1.27
CDK2AP2-204ENST00000531178 ADM2Q7Z4H4 148 aa7.14□□□□□ -1.27
CDK2AP2-204ENST00000531178 KRTAP10-10P60014 251 aa7.1□□□□□ -1.27
CDK2AP2-204ENST00000531178 MT1FP04733 61 aa7.09□□□□□ -1.27
CDK2AP2-204ENST00000531178 SEC61GP60059 68 aa7.09□□□□□ -1.27
CDK2AP2-204ENST00000531178 KRTAP3-2Q9BYR7 98 aa7.08□□□□□ -1.28
CDK2AP2-204ENST00000531178 SMIM26A0A096LP01 95 aa7.05□□□□□ -1.28
CDK2AP2-204ENST00000531178 P0C880 135 aa7.04□□□□□ -1.28
CDK2AP2-204ENST00000531178 LINC01558Q9Y6Z2 57 aa7.04□□□□□ -1.28
CDK2AP2-204ENST00000531178 A0A1B0GU69 56 aa7.03□□□□□ -1.28
CDK2AP2-204ENST00000531178 V9GYY9 64 aa7□□□□□ -1.29
CDK2AP2-204ENST00000531178 PRR15LQ9BU68 103 aa6.99□□□□□ -1.29
CDK2AP2-204ENST00000531178 CRIPTQ9P021 101 aa6.99□□□□□ -1.29
CDK2AP2-204ENST00000531178 Q1T7F1 81 aa6.98□□□□□ -1.29
CDK2AP2-204ENST00000531178 KRTAP9-3Q9BYQ3 159 aa6.95□□□□□ -1.3
CDK2AP2-204ENST00000531178 R4GN34 69 aa6.92□□□□□ -1.3
CDK2AP2-204ENST00000531178 A0A1B0GU33 70 aa6.9□□□□□ -1.3
CDK2AP2-204ENST00000531178 M0QZ58 72 aa6.89□□□□□ -1.31
CDK2AP2-204ENST00000531178 SPRR2GQ9BYE4 73 aa6.88□□□□□ -1.31
CDK2AP2-204ENST00000531178 KRTAP19-1Q8IUB9 90 aa6.87□□□□□ -1.31
CDK2AP2-204ENST00000531178 PSPHP1O15172 72 aa6.86□□□□□ -1.31
CDK2AP2-204ENST00000531178 LCE2DQ5TA82 110 aaPredicted RBP6.85□□□□□ -1.31
CDK2AP2-204ENST00000531178 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
CDK2AP2-204ENST00000531178 LCE2BO14633 110 aa6.79□□□□□ -1.32
CDK2AP2-204ENST00000531178 Q5VV11 94 aa6.79□□□□□ -1.32
CDK2AP2-204ENST00000531178 SPATA8Q6RVD6 105 aa6.78□□□□□ -1.32
CDK2AP2-204ENST00000531178 UQCR11O14957 56 aa6.77□□□□□ -1.33
CDK2AP2-204ENST00000531178 LINC01554Q52M75 96 aa6.76□□□□□ -1.33
CDK2AP2-204ENST00000531178 KRTAP19-8Q3LI54 63 aa6.74□□□□□ -1.33
CDK2AP2-204ENST00000531178 KRTAP9-2Q9BYQ4 174 aa6.71□□□□□ -1.34
CDK2AP2-204ENST00000531178 A0A0D9SG42 100 aa6.68□□□□□ -1.34
CDK2AP2-204ENST00000531178 A6NED7 52 aa6.67□□□□□ -1.34
CDK2AP2-204ENST00000531178 USH2AO75445 5202 aa6.67□□□□□ -1.34
CDK2AP2-204ENST00000531178 MIR22HGQ0VDD5 57 aa6.66□□□□□ -1.34
CDK2AP2-204ENST00000531178 MT1BP07438 61 aa6.65□□□□□ -1.34
CDK2AP2-204ENST00000531178 A6NN06 94 aa6.64□□□□□ -1.35
CDK2AP2-204ENST00000531178 A8MU10 97 aa6.63□□□□□ -1.35
CDK2AP2-204ENST00000531178 PLAC4Q8WY50 150 aa6.63□□□□□ -1.35
CDK2AP2-204ENST00000531178 SPINT4Q6UDR6 99 aa6.56□□□□□ -1.36
CDK2AP2-204ENST00000531178 FSIP2Q5CZC0 6907 aa6.55□□□□□ -1.36
CDK2AP2-204ENST00000531178 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
CDK2AP2-204ENST00000531178 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
CDK2AP2-204ENST00000531178 CDC42SE1Q9NRR8 79 aa6.5□□□□□ -1.37
CDK2AP2-204ENST00000531178 SSPOA2VEC9 5147 aa6.49□□□□□ -1.37
CDK2AP2-204ENST00000531178 KRTAP19-6Q3LI70 58 aa6.46□□□□□ -1.38
CDK2AP2-204ENST00000531178 CAMK2N1Q7Z7J9 78 aa6.46□□□□□ -1.38
CDK2AP2-204ENST00000531178 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
CDK2AP2-204ENST00000531178 K7ERS5 55 aa6.44□□□□□ -1.38
CDK2AP2-204ENST00000531178 KRTAP10-5P60370 271 aa6.39□□□□□ -1.39
CDK2AP2-204ENST00000531178 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
CDK2AP2-204ENST00000531178 MT1XP80297 61 aa6.38□□□□□ -1.39
CDK2AP2-204ENST00000531178 BRK1Q8WUW1 75 aa6.38□□□□□ -1.39
CDK2AP2-204ENST00000531178 KRTAP9-6A0A140TA67 174 aa6.3□□□□□ -1.4
CDK2AP2-204ENST00000531178 FCGBPQ9Y6R7 5405 aaPredicted RBP6.26□□□□□ -1.41
CDK2AP2-204ENST00000531178 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.42
CDK2AP2-204ENST00000531178 KRTAP10-7P60409 375 aaPredicted RBP6.11□□□□□ -1.43
CDK2AP2-204ENST00000531178 ROMO1P60602 79 aa6.11□□□□□ -1.43
CDK2AP2-204ENST00000531178 TNP1P09430 55 aa6.1□□□□□ -1.43
CDK2AP2-204ENST00000531178 PRO0628Q9UI54 55 aa6.1□□□□□ -1.43
CDK2AP2-204ENST00000531178 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
CDK2AP2-204ENST00000531178 PMAIP1Q13794 54 aa6.04□□□□□ -1.44
CDK2AP2-204ENST00000531178 KRTAP25-1Q3LHN0 102 aa6.03□□□□□ -1.44
CDK2AP2-204ENST00000531178 MACF1Q9UPN3 7388 aaKnown RBP6.01□□□□□ -1.45
CDK2AP2-204ENST00000531178 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.96□□□□□ -1.46
CDK2AP2-204ENST00000531178 KRTAP4-8A0A0G2JLE6 195 aa5.93□□□□□ -1.46
CDK2AP2-204ENST00000531178 KRTAP4-8Q9BYQ9 185 aa5.93□□□□□ -1.46
CDK2AP2-204ENST00000531178 KMT2DO14686 5537 aa5.91□□□□□ -1.46
CDK2AP2-204ENST00000531178 KRTAP8-1Q8IUC2 63 aa5.87□□□□□ -1.47
CDK2AP2-204ENST00000531178 LCE3AQ5TA76 89 aa5.86□□□□□ -1.47
CDK2AP2-204ENST00000531178 SYNE2Q8WXH0 6885 aaKnown RBP5.84□□□□□ -1.47
CDK2AP2-204ENST00000531178 KRTAP23-1A1A580 65 aa5.83□□□□□ -1.48
CDK2AP2-204ENST00000531178 PP632Q6XCG6 107 aa5.77□□□□□ -1.49
CDK2AP2-204ENST00000531178 KRTAP6-3Q3LI67 103 aa5.76□□□□□ -1.49
CDK2AP2-204ENST00000531178 KRTAP5-9P26371 169 aa5.73□□□□□ -1.49
CDK2AP2-204ENST00000531178 KRTAP9-7A8MTY7 169 aa5.72□□□□□ -1.49
CDK2AP2-204ENST00000531178 KRTAP19-5Q3LI72 72 aa5.71□□□□□ -1.5
CDK2AP2-204ENST00000531178 SPRR2FQ96RM1 72 aa5.71□□□□□ -1.5
CDK2AP2-204ENST00000531178 KRTAP19-7Q3SYF9 63 aa5.69□□□□□ -1.5
CDK2AP2-204ENST00000531178 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
CDK2AP2-204ENST00000531178 PRAC1Q96KF2 57 aa5.65□□□□□ -1.5
CDK2AP2-204ENST00000531178 KRTAP12-3P60328 96 aa5.64□□□□□ -1.51
CDK2AP2-204ENST00000531178 MT1EP04732 61 aa5.62□□□□□ -1.51
CDK2AP2-204ENST00000531178 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
CDK2AP2-204ENST00000531178 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
CDK2AP2-204ENST00000531178 SPRR2EP22531 72 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms