RNA–Protein interactions for RNA: ENST00000530990.1

LTBP3-219, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 2

Gene LTBP3, Length 531 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-219ENST00000530990 CSAG1Q6PB30 78 aa5.53□□□□□ -1.52
LTBP3-219ENST00000530990 KRTAP3-3Q9BYR6 98 aa5.53□□□□□ -1.52
LTBP3-219ENST00000530990 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.52□□□□□ -1.53
LTBP3-219ENST00000530990 H3BPC8 53 aa5.52□□□□□ -1.53
LTBP3-219ENST00000530990 KRTAP9-7A8MTY7 169 aa5.5□□□□□ -1.53
LTBP3-219ENST00000530990 A8MUN3 132 aa5.48□□□□□ -1.53
LTBP3-219ENST00000530990 TRAV7A0A075B6U4 112 aa5.46□□□□□ -1.54
LTBP3-219ENST00000530990 SMIM20Q8N5G0 67 aa5.45□□□□□ -1.54
LTBP3-219ENST00000530990 FCGBPQ9Y6R7 5405 aaPredicted RBP5.44□□□□□ -1.54
LTBP3-219ENST00000530990 NDUFC1O43677 76 aa5.43□□□□□ -1.54
LTBP3-219ENST00000530990 KRTAP19-1Q8IUB9 90 aa5.43□□□□□ -1.54
LTBP3-219ENST00000530990 DMAC1Q96GE9 116 aa5.41□□□□□ -1.54
LTBP3-219ENST00000530990 SPRR2GQ9BYE4 73 aa5.35□□□□□ -1.55
LTBP3-219ENST00000530990 SNURFQ9Y675 71 aa5.35□□□□□ -1.55
LTBP3-219ENST00000530990 H0YAA0 97 aa5.34□□□□□ -1.55
LTBP3-219ENST00000530990 SERP2Q8N6R1 65 aa5.34□□□□□ -1.55
LTBP3-219ENST00000530990 KRTAP19-6Q3LI70 58 aa5.33□□□□□ -1.56
LTBP3-219ENST00000530990 ADM2Q7Z4H4 148 aa5.31□□□□□ -1.56
LTBP3-219ENST00000530990 C20orf197Q8N268 126 aa5.31□□□□□ -1.56
LTBP3-219ENST00000530990 MT1BP07438 61 aa5.29□□□□□ -1.56
LTBP3-219ENST00000530990 KRTAP19-8Q3LI54 63 aa5.29□□□□□ -1.56
LTBP3-219ENST00000530990 CRIPTQ9P021 101 aa5.29□□□□□ -1.56
LTBP3-219ENST00000530990 ACYP2P14621 99 aa5.28□□□□□ -1.56
LTBP3-219ENST00000530990 Q5VV11 94 aa5.27□□□□□ -1.57
LTBP3-219ENST00000530990 MACF1Q9UPN3 7388 aaKnown RBP5.27□□□□□ -1.57
LTBP3-219ENST00000530990 SPANXA2-OT1Q8N9U9 137 aa5.23□□□□□ -1.57
LTBP3-219ENST00000530990 P0C880 135 aa5.22□□□□□ -1.57
LTBP3-219ENST00000530990 COX7CP15954 63 aa5.21□□□□□ -1.58
LTBP3-219ENST00000530990 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
LTBP3-219ENST00000530990 KRTAP3-2Q9BYR7 98 aa5.19□□□□□ -1.58
LTBP3-219ENST00000530990 SPTSSBQ8NFR3 76 aa5.18□□□□□ -1.58
LTBP3-219ENST00000530990 SYNE2Q8WXH0 6885 aaKnown RBP5.17□□□□□ -1.58
LTBP3-219ENST00000530990 CYSTM1Q9H1C7 97 aa5.16□□□□□ -1.58
LTBP3-219ENST00000530990 A6NN06 94 aa5.15□□□□□ -1.59
LTBP3-219ENST00000530990 R4GN34 69 aa5.15□□□□□ -1.59
LTBP3-219ENST00000530990 M0QZ58 72 aa5.13□□□□□ -1.59
LTBP3-219ENST00000530990 H7BZZ5 65 aa5.12□□□□□ -1.59
LTBP3-219ENST00000530990 KRTAP10-5P60370 271 aa5.12□□□□□ -1.59
LTBP3-219ENST00000530990 KRTAP6-3Q3LI67 103 aa5.12□□□□□ -1.59
LTBP3-219ENST00000530990 ANAPC13Q9BS18 74 aa5.12□□□□□ -1.59
LTBP3-219ENST00000530990 COA5Q86WW8 74 aa5.11□□□□□ -1.59
LTBP3-219ENST00000530990 PCP4P48539 62 aa5.09□□□□□ -1.59
LTBP3-219ENST00000530990 LINC01554Q52M75 96 aa5.05□□□□□ -1.6
LTBP3-219ENST00000530990 CCDC179H3BU77 68 aa5.03□□□□□ -1.6
LTBP3-219ENST00000530990 PLAC4Q8WY50 150 aa5.03□□□□□ -1.6
LTBP3-219ENST00000530990 MT1XP80297 61 aa5□□□□□ -1.61
LTBP3-219ENST00000530990 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
LTBP3-219ENST00000530990 PRO2289Q9P1D8 64 aa4.97□□□□□ -1.61
LTBP3-219ENST00000530990 KRTAP13-4Q3LI77 160 aa4.96□□□□□ -1.62
LTBP3-219ENST00000530990 SEC61GP60059 68 aa4.91□□□□□ -1.62
LTBP3-219ENST00000530990 SERP1Q9Y6X1 66 aa4.91□□□□□ -1.62
LTBP3-219ENST00000530990 ATP5EP56381 51 aaPredicted RBP4.89□□□□□ -1.63
LTBP3-219ENST00000530990 NEBP20929 6669 aa4.85□□□□□ -1.63
LTBP3-219ENST00000530990 KMT2DO14686 5537 aa4.85□□□□□ -1.63
LTBP3-219ENST00000530990 A0A1B0GU33 70 aa4.83□□□□□ -1.64
LTBP3-219ENST00000530990 A0A1B0GU69 56 aa4.83□□□□□ -1.64
LTBP3-219ENST00000530990 KRTAP5-9P26371 169 aa4.83□□□□□ -1.64
LTBP3-219ENST00000530990 TMEM258P61165 79 aa4.83□□□□□ -1.64
LTBP3-219ENST00000530990 SPATA8Q6RVD6 105 aa4.83□□□□□ -1.64
LTBP3-219ENST00000530990 KRTAP12-2P59991 146 aa4.82□□□□□ -1.64
LTBP3-219ENST00000530990 KRTAP20-1Q3LI63 56 aa4.82□□□□□ -1.64
LTBP3-219ENST00000530990 MDN1Q9NU22 5596 aa4.81□□□□□ -1.64
LTBP3-219ENST00000530990 A0A0D9SG42 100 aa4.8□□□□□ -1.64
LTBP3-219ENST00000530990 KRTAP10-7P60409 375 aaPredicted RBP4.78□□□□□ -1.64
LTBP3-219ENST00000530990 CAMK2N1Q7Z7J9 78 aa4.76□□□□□ -1.65
LTBP3-219ENST00000530990 KRTAP10-12P60413 245 aa4.74□□□□□ -1.65
LTBP3-219ENST00000530990 KRTAP4-8A0A0G2JLE6 195 aa4.73□□□□□ -1.65
LTBP3-219ENST00000530990 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
LTBP3-219ENST00000530990 KRTAP4-8Q9BYQ9 185 aa4.73□□□□□ -1.65
LTBP3-219ENST00000530990 SPINT4Q6UDR6 99 aa4.72□□□□□ -1.65
LTBP3-219ENST00000530990 LINC01558Q9Y6Z2 57 aa4.72□□□□□ -1.65
LTBP3-219ENST00000530990 KRTAP12-1P59990 96 aa4.71□□□□□ -1.66
LTBP3-219ENST00000530990 SPRR2FQ96RM1 72 aa4.71□□□□□ -1.66
LTBP3-219ENST00000530990 PRR15LQ9BU68 103 aa4.71□□□□□ -1.66
LTBP3-219ENST00000530990 A8MU10 97 aa4.69□□□□□ -1.66
LTBP3-219ENST00000530990 SMIM26A0A096LP01 95 aa4.68□□□□□ -1.66
LTBP3-219ENST00000530990 KRTAP2-3P0C7H8 128 aa4.66□□□□□ -1.66
LTBP3-219ENST00000530990 KRTAP2-4Q9BYR9 128 aa4.66□□□□□ -1.66
LTBP3-219ENST00000530990 RPS28P62857 69 aaKnown RBP4.65□□□□□ -1.67
LTBP3-219ENST00000530990 SPRR2EP22531 72 aa4.64□□□□□ -1.67
LTBP3-219ENST00000530990 SPRR2BP35325 72 aa4.64□□□□□ -1.67
LTBP3-219ENST00000530990 SPRR2AP35326 72 aa4.64□□□□□ -1.67
LTBP3-219ENST00000530990 UQCR11O14957 56 aa4.56□□□□□ -1.68
LTBP3-219ENST00000530990 LCE1AQ5T7P2 110 aa4.56□□□□□ -1.68
LTBP3-219ENST00000530990 Q1T7F1 81 aa4.51□□□□□ -1.69
LTBP3-219ENST00000530990 V9GYY9 64 aa4.51□□□□□ -1.69
LTBP3-219ENST00000530990 PSPHP1O15172 72 aa4.5□□□□□ -1.69
LTBP3-219ENST00000530990 KRTAP2-2Q9BYT5 123 aa4.5□□□□□ -1.69
LTBP3-219ENST00000530990 KRTAP2-1Q9BYU5 128 aa4.5□□□□□ -1.69
LTBP3-219ENST00000530990 C10orf95Q9H7T3 257 aa4.5□□□□□ -1.69
LTBP3-219ENST00000530990 SPRR2DP22532 72 aa4.49□□□□□ -1.69
LTBP3-219ENST00000530990 MIR22HGQ0VDD5 57 aa4.48□□□□□ -1.69
LTBP3-219ENST00000530990 KRTAP19-7Q3SYF9 63 aa4.46□□□□□ -1.7
LTBP3-219ENST00000530990 TNP1P09430 55 aa4.42□□□□□ -1.7
LTBP3-219ENST00000530990 MT1EP04732 61 aa4.41□□□□□ -1.7
LTBP3-219ENST00000530990 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
LTBP3-219ENST00000530990 GPR98Q8WXG9 6306 aa4.39□□□□□ -1.71
LTBP3-219ENST00000530990 LCE3AQ5TA76 89 aa4.38□□□□□ -1.71
LTBP3-219ENST00000530990 LCE3BQ5TA77 95 aa4.38□□□□□ -1.71
LTBP3-219ENST00000530990 A6NED7 52 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms