RNA–Protein interactions for RNA: ENST00000530378.5

SOX6-213, Transcript of SRY-box 6, humanhuman

TSL 2

Gene SOX6, Length 1,818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-213ENST00000530378 MP68P56378 58 aa5.52□□□□□ -1.53
SOX6-213ENST00000530378 SERP2Q8N6R1 65 aa5.51□□□□□ -1.53
SOX6-213ENST00000530378 FAT4Q6V0I7 4981 aa5.51□□□□□ -1.53
SOX6-213ENST00000530378 KRTAP19-4Q3LI73 84 aa5.51□□□□□ -1.53
SOX6-213ENST00000530378 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
SOX6-213ENST00000530378 C1orf64Q8NEQ6 169 aa5.51□□□□□ -1.53
SOX6-213ENST00000530378 KRTAP4-2Q9BYR5 136 aa5.51□□□□□ -1.53
SOX6-213ENST00000530378 SNURFQ9Y675 71 aa5.49□□□□□ -1.53
SOX6-213ENST00000530378 A0A0U1RQV1 116 aa5.48□□□□□ -1.53
SOX6-213ENST00000530378 LOC101927531A0A1B0GV80 90 aa5.48□□□□□ -1.53
SOX6-213ENST00000530378 C20orf197Q8N268 126 aa5.48□□□□□ -1.53
SOX6-213ENST00000530378 SMIM26A0A096LP01 95 aa5.47□□□□□ -1.53
SOX6-213ENST00000530378 CYP4F30PQ9H0H9 118 aa5.47□□□□□ -1.53
SOX6-213ENST00000530378 SERP1Q9Y6X1 66 aa5.47□□□□□ -1.53
SOX6-213ENST00000530378 HRES1P13985 223 aa5.46□□□□□ -1.53
SOX6-213ENST00000530378 BRK1Q8WUW1 75 aa5.45□□□□□ -1.54
SOX6-213ENST00000530378 KLKP1Q107X0 134 aa5.44□□□□□ -1.54
SOX6-213ENST00000530378 KRTAP9-7A8MTY7 169 aa5.43□□□□□ -1.54
SOX6-213ENST00000530378 H3BPC8 53 aa5.41□□□□□ -1.54
SOX6-213ENST00000530378 CYSTM1Q9H1C7 97 aa5.4□□□□□ -1.54
SOX6-213ENST00000530378 COX6B2Q6YFQ2 88 aa5.39□□□□□ -1.55
SOX6-213ENST00000530378 KRTAP4-11Q9BYQ6 195 aa5.39□□□□□ -1.55
SOX6-213ENST00000530378 CRCT1Q9UGL9 99 aa5.39□□□□□ -1.55
SOX6-213ENST00000530378 MPLKIPQ8TAP9 179 aa5.38□□□□□ -1.55
SOX6-213ENST00000530378 RBM12B-AS1Q9P1G2 102 aa5.38□□□□□ -1.55
SOX6-213ENST00000530378 KRTAP19-2Q3LHN2 52 aa5.37□□□□□ -1.55
SOX6-213ENST00000530378 FLGP20930 4061 aaPredicted RBP5.33□□□□□ -1.56
SOX6-213ENST00000530378 KRTAP3-1Q9BYR8 98 aa5.33□□□□□ -1.56
SOX6-213ENST00000530378 ATP5EP56381 51 aaPredicted RBP5.32□□□□□ -1.56
SOX6-213ENST00000530378 H7BZZ5 65 aa5.3□□□□□ -1.56
SOX6-213ENST00000530378 KTN1-AS1Q86SY8 53 aa5.3□□□□□ -1.56
SOX6-213ENST00000530378 LCE5AQ5TCM9 118 aa5.27□□□□□ -1.57
SOX6-213ENST00000530378 H1FX-AS1Q4G0G2 97 aa5.27□□□□□ -1.57
SOX6-213ENST00000530378 NDUFC1O43677 76 aa5.26□□□□□ -1.57
SOX6-213ENST00000530378 MT1HP80294 61 aa5.25□□□□□ -1.57
SOX6-213ENST00000530378 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
SOX6-213ENST00000530378 DMAC1Q96GE9 116 aa5.25□□□□□ -1.57
SOX6-213ENST00000530378 KRTAP9-8Q9BYQ0 159 aa5.23□□□□□ -1.57
SOX6-213ENST00000530378 SPANXA2-OT1Q8N9U9 137 aa5.23□□□□□ -1.57
SOX6-213ENST00000530378 KRTAP9-3Q9BYQ3 159 aa5.22□□□□□ -1.57
SOX6-213ENST00000530378 S4R3F8 94 aa5.22□□□□□ -1.57
SOX6-213ENST00000530378 A8MUN3 132 aa5.21□□□□□ -1.58
SOX6-213ENST00000530378 M0R2T5 61 aa5.21□□□□□ -1.58
SOX6-213ENST00000530378 LCA10Q71F78 164 aa5.2□□□□□ -1.58
SOX6-213ENST00000530378 FSIP2Q5CZC0 6907 aa5.19□□□□□ -1.58
SOX6-213ENST00000530378 ACYP2P14621 99 aa5.18□□□□□ -1.58
SOX6-213ENST00000530378 KRTAP23-1A1A580 65 aa5.17□□□□□ -1.58
SOX6-213ENST00000530378 CHKB-CPT1BH3BT56 60 aa5.14□□□□□ -1.59
SOX6-213ENST00000530378 Q1T7F1 81 aa5.14□□□□□ -1.59
SOX6-213ENST00000530378 COA5Q86WW8 74 aa5.14□□□□□ -1.59
SOX6-213ENST00000530378 CSAG1Q6PB30 78 aa5.09□□□□□ -1.59
SOX6-213ENST00000530378 KRTAP10-6P60371 365 aaPredicted RBP5.07□□□□□ -1.6
SOX6-213ENST00000530378 A0A0A0MQY5 61 aa5.06□□□□□ -1.6
SOX6-213ENST00000530378 A6NN06 94 aa5.05□□□□□ -1.6
SOX6-213ENST00000530378 SPTSSBQ8NFR3 76 aa5.01□□□□□ -1.61
SOX6-213ENST00000530378 MT2AP02795 61 aa5□□□□□ -1.61
SOX6-213ENST00000530378 LINC01554Q52M75 96 aa5□□□□□ -1.61
SOX6-213ENST00000530378 MT1FP04733 61 aa4.97□□□□□ -1.61
SOX6-213ENST00000530378 ADM2Q7Z4H4 148 aa4.97□□□□□ -1.61
SOX6-213ENST00000530378 KRTAP10-10P60014 251 aa4.95□□□□□ -1.62
SOX6-213ENST00000530378 PSPHP1O15172 72 aa4.93□□□□□ -1.62
SOX6-213ENST00000530378 P0C880 135 aa4.93□□□□□ -1.62
SOX6-213ENST00000530378 Q5VV11 94 aa4.93□□□□□ -1.62
SOX6-213ENST00000530378 H0YAA0 97 aa4.9□□□□□ -1.63
SOX6-213ENST00000530378 CDC42SE1Q9NRR8 79 aa4.89□□□□□ -1.63
SOX6-213ENST00000530378 A8MU10 97 aa4.88□□□□□ -1.63
SOX6-213ENST00000530378 A0A1B0GU69 56 aa4.86□□□□□ -1.63
SOX6-213ENST00000530378 PRR15LQ9BU68 103 aa4.83□□□□□ -1.64
SOX6-213ENST00000530378 LINC01558Q9Y6Z2 57 aa4.83□□□□□ -1.64
SOX6-213ENST00000530378 M0QZ58 72 aa4.81□□□□□ -1.64
SOX6-213ENST00000530378 R4GN34 69 aa4.79□□□□□ -1.64
SOX6-213ENST00000530378 A6NED7 52 aa4.79□□□□□ -1.64
SOX6-213ENST00000530378 KRTAP13-4Q3LI77 160 aa4.77□□□□□ -1.65
SOX6-213ENST00000530378 CRIPTQ9P021 101 aa4.76□□□□□ -1.65
SOX6-213ENST00000530378 A0A1B0GU33 70 aa4.75□□□□□ -1.65
SOX6-213ENST00000530378 SPATA8Q6RVD6 105 aa4.75□□□□□ -1.65
SOX6-213ENST00000530378 SPRR2GQ9BYE4 73 aa4.74□□□□□ -1.65
SOX6-213ENST00000530378 USH2AO75445 5202 aa4.74□□□□□ -1.65
SOX6-213ENST00000530378 PRAC1Q96KF2 57 aa4.73□□□□□ -1.65
SOX6-213ENST00000530378 KRTAP15-1Q3LI76 137 aa4.72□□□□□ -1.65
SOX6-213ENST00000530378 A0A0D9SG42 100 aa4.7□□□□□ -1.66
SOX6-213ENST00000530378 FCGBPQ9Y6R7 5405 aaPredicted RBP4.7□□□□□ -1.66
SOX6-213ENST00000530378 SSPOA2VEC9 5147 aa4.69□□□□□ -1.66
SOX6-213ENST00000530378 MT1BP07438 61 aa4.65□□□□□ -1.67
SOX6-213ENST00000530378 KRTAP19-8Q3LI54 63 aa4.65□□□□□ -1.67
SOX6-213ENST00000530378 UQCR11O14957 56 aa4.64□□□□□ -1.67
SOX6-213ENST00000530378 ROMO1P60602 79 aa4.64□□□□□ -1.67
SOX6-213ENST00000530378 MIR22HGQ0VDD5 57 aa4.6□□□□□ -1.67
SOX6-213ENST00000530378 SPINT4Q6UDR6 99 aa4.58□□□□□ -1.68
SOX6-213ENST00000530378 PLAC4Q8WY50 150 aa4.57□□□□□ -1.68
SOX6-213ENST00000530378 KRTAP12-2P59991 146 aa4.55□□□□□ -1.68
SOX6-213ENST00000530378 KRTAP6-3Q3LI67 103 aa4.55□□□□□ -1.68
SOX6-213ENST00000530378 KRTAP12-1P59990 96 aa4.54□□□□□ -1.68
SOX6-213ENST00000530378 MACF1Q9UPN3 7388 aaKnown RBP4.52□□□□□ -1.69
SOX6-213ENST00000530378 SYNE2Q8WXH0 6885 aaKnown RBP4.52□□□□□ -1.69
SOX6-213ENST00000530378 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
SOX6-213ENST00000530378 KRTAP20-1Q3LI63 56 aa4.46□□□□□ -1.69
SOX6-213ENST00000530378 KRTAP19-6Q3LI70 58 aa4.46□□□□□ -1.69
SOX6-213ENST00000530378 MT1XP80297 61 aa4.45□□□□□ -1.7
SOX6-213ENST00000530378 KRTAP10-5P60370 271 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms