RNA–Protein interactions for RNA: ENST00000530167.1

H2AFX-202, Transcript of H2A histone family member X, humanhuman

APPRIS P1 BASIC

Gene H2AFX, Length 1,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-202ENST00000530167 LCA10Q71F78 164 aa10.15□□□□□ -0.79
H2AFX-202ENST00000530167 DMAC1Q96GE9 116 aa10.13□□□□□ -0.79
H2AFX-202ENST00000530167 TMEM258P61165 79 aa10.07□□□□□ -0.8
H2AFX-202ENST00000530167 KRTAP3-3Q9BYR6 98 aa10.05□□□□□ -0.8
H2AFX-202ENST00000530167 ACYP2P14621 99 aa10.04□□□□□ -0.8
H2AFX-202ENST00000530167 CSAG1Q6PB30 78 aa10.04□□□□□ -0.8
H2AFX-202ENST00000530167 KRTAP9-8Q9BYQ0 159 aa10.04□□□□□ -0.8
H2AFX-202ENST00000530167 ATP5EP56381 51 aaPredicted RBP10.02□□□□□ -0.81
H2AFX-202ENST00000530167 MT2AP02795 61 aa9.96□□□□□ -0.81
H2AFX-202ENST00000530167 MT1FP04733 61 aa9.89□□□□□ -0.83
H2AFX-202ENST00000530167 COA5Q86WW8 74 aa9.89□□□□□ -0.83
H2AFX-202ENST00000530167 CHKB-CPT1BH3BT56 60 aa9.89□□□□□ -0.83
H2AFX-202ENST00000530167 KRTAP10-10P60014 251 aa9.88□□□□□ -0.83
H2AFX-202ENST00000530167 LCE2DQ5TA82 110 aaPredicted RBP9.77□□□□□ -0.85
H2AFX-202ENST00000530167 SPTSSBQ8NFR3 76 aa9.76□□□□□ -0.85
H2AFX-202ENST00000530167 SERP1Q9Y6X1 66 aa9.76□□□□□ -0.85
H2AFX-202ENST00000530167 KRTAP9-2Q9BYQ4 174 aa9.73□□□□□ -0.85
H2AFX-202ENST00000530167 H0YAA0 97 aa9.72□□□□□ -0.85
H2AFX-202ENST00000530167 KRTAP9-3Q9BYQ3 159 aa9.7□□□□□ -0.86
H2AFX-202ENST00000530167 ADM2Q7Z4H4 148 aa9.67□□□□□ -0.86
H2AFX-202ENST00000530167 RPS28P62857 69 aaKnown RBP9.59□□□□□ -0.87
H2AFX-202ENST00000530167 LCE2BO14633 110 aa9.54□□□□□ -0.88
H2AFX-202ENST00000530167 P0C880 135 aa9.53□□□□□ -0.88
H2AFX-202ENST00000530167 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
H2AFX-202ENST00000530167 CRIPTQ9P021 101 aa9.52□□□□□ -0.89
H2AFX-202ENST00000530167 KRTAP19-1Q8IUB9 90 aa9.49□□□□□ -0.89
H2AFX-202ENST00000530167 SPRR2GQ9BYE4 73 aa9.46□□□□□ -0.89
H2AFX-202ENST00000530167 SMIM26A0A096LP01 95 aa9.45□□□□□ -0.9
H2AFX-202ENST00000530167 SEC61GP60059 68 aa9.42□□□□□ -0.9
H2AFX-202ENST00000530167 LINC01558Q9Y6Z2 57 aa9.4□□□□□ -0.9
H2AFX-202ENST00000530167 R4GN34 69 aa9.38□□□□□ -0.91
H2AFX-202ENST00000530167 A0A1B0GU69 56 aa9.38□□□□□ -0.91
H2AFX-202ENST00000530167 V9GYY9 64 aa9.36□□□□□ -0.91
H2AFX-202ENST00000530167 FSIP2Q5CZC0 6907 aa9.36□□□□□ -0.91
H2AFX-202ENST00000530167 Q1T7F1 81 aa9.34□□□□□ -0.91
H2AFX-202ENST00000530167 M0QZ58 72 aa9.34□□□□□ -0.91
H2AFX-202ENST00000530167 USH2AO75445 5202 aa9.33□□□□□ -0.92
H2AFX-202ENST00000530167 PRR15LQ9BU68 103 aa9.31□□□□□ -0.92
H2AFX-202ENST00000530167 KRTAP19-8Q3LI54 63 aa9.3□□□□□ -0.92
H2AFX-202ENST00000530167 CRCT1Q9UGL9 99 aa9.29□□□□□ -0.92
H2AFX-202ENST00000530167 Q5VV11 94 aa9.27□□□□□ -0.93
H2AFX-202ENST00000530167 MT1BP07438 61 aa9.23□□□□□ -0.93
H2AFX-202ENST00000530167 PSPHP1O15172 72 aa9.2□□□□□ -0.94
H2AFX-202ENST00000530167 KRTAP9-6A0A140TA67 174 aa9.2□□□□□ -0.94
H2AFX-202ENST00000530167 A0A1B0GU33 70 aa9.19□□□□□ -0.94
H2AFX-202ENST00000530167 LINC01554Q52M75 96 aa9.19□□□□□ -0.94
H2AFX-202ENST00000530167 KRTAP13-4Q3LI77 160 aa9.15□□□□□ -0.94
H2AFX-202ENST00000530167 SSPOA2VEC9 5147 aa9.13□□□□□ -0.95
H2AFX-202ENST00000530167 KRTAP19-6Q3LI70 58 aa9.09□□□□□ -0.95
H2AFX-202ENST00000530167 SPATA8Q6RVD6 105 aa9.05□□□□□ -0.96
H2AFX-202ENST00000530167 PLAC4Q8WY50 150 aa9.05□□□□□ -0.96
H2AFX-202ENST00000530167 UQCR11O14957 56 aa9.03□□□□□ -0.96
H2AFX-202ENST00000530167 A0A0D9SG42 100 aa8.95□□□□□ -0.98
H2AFX-202ENST00000530167 A6NN06 94 aa8.95□□□□□ -0.98
H2AFX-202ENST00000530167 A6NED7 52 aa8.94□□□□□ -0.98
H2AFX-202ENST00000530167 MIR22HGQ0VDD5 57 aa8.91□□□□□ -0.98
H2AFX-202ENST00000530167 KRTAP10-5P60370 271 aa8.89□□□□□ -0.99
H2AFX-202ENST00000530167 FCGBPQ9Y6R7 5405 aaPredicted RBP8.86□□□□□ -0.99
H2AFX-202ENST00000530167 A8MU10 97 aa8.86□□□□□ -0.99
H2AFX-202ENST00000530167 MT1XP80297 61 aa8.8□□□□□ -1
H2AFX-202ENST00000530167 PRO2289Q9P1D8 64 aa8.8□□□□□ -1
H2AFX-202ENST00000530167 SPINT4Q6UDR6 99 aa8.78□□□□□ -1
H2AFX-202ENST00000530167 KRTAP12-1P59990 96 aa8.76□□□□□ -1.01
H2AFX-202ENST00000530167 KRTAP12-2P59991 146 aa8.72□□□□□ -1.01
H2AFX-202ENST00000530167 CAMK2N1Q7Z7J9 78 aa8.72□□□□□ -1.01
H2AFX-202ENST00000530167 CDC42SE1Q9NRR8 79 aa8.72□□□□□ -1.01
H2AFX-202ENST00000530167 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.62□□□□□ -1.03
H2AFX-202ENST00000530167 BRK1Q8WUW1 75 aa8.6□□□□□ -1.03
H2AFX-202ENST00000530167 K7ERS5 55 aa8.58□□□□□ -1.04
H2AFX-202ENST00000530167 MACF1Q9UPN3 7388 aaKnown RBP8.54□□□□□ -1.04
H2AFX-202ENST00000530167 KRTAP10-7P60409 375 aaPredicted RBP8.43□□□□□ -1.06
H2AFX-202ENST00000530167 KRTAP10-12P60413 245 aa8.36□□□□□ -1.07
H2AFX-202ENST00000530167 KRTAP9-7A8MTY7 169 aa8.35□□□□□ -1.07
H2AFX-202ENST00000530167 SYNE2Q8WXH0 6885 aaKnown RBP8.34□□□□□ -1.07
H2AFX-202ENST00000530167 C10orf95Q9H7T3 257 aa8.32□□□□□ -1.08
H2AFX-202ENST00000530167 KMT2DO14686 5537 aa8.27□□□□□ -1.09
H2AFX-202ENST00000530167 KRTAP4-8A0A0G2JLE6 195 aa8.26□□□□□ -1.09
H2AFX-202ENST00000530167 KRTAP4-8Q9BYQ9 185 aa8.26□□□□□ -1.09
H2AFX-202ENST00000530167 KRTAP6-3Q3LI67 103 aa8.24□□□□□ -1.09
H2AFX-202ENST00000530167 PRO0628Q9UI54 55 aa8.24□□□□□ -1.09
H2AFX-202ENST00000530167 KRTAP8-1Q8IUC2 63 aa8.2□□□□□ -1.1
H2AFX-202ENST00000530167 TNP1P09430 55 aa8.19□□□□□ -1.1
H2AFX-202ENST00000530167 ROMO1P60602 79 aa8.15□□□□□ -1.1
H2AFX-202ENST00000530167 PMAIP1Q13794 54 aa8.13□□□□□ -1.11
H2AFX-202ENST00000530167 KRTAP5-9P26371 169 aa8.11□□□□□ -1.11
H2AFX-202ENST00000530167 SPRR2FQ96RM1 72 aa8.04□□□□□ -1.12
H2AFX-202ENST00000530167 KRTAP25-1Q3LHN0 102 aa8.01□□□□□ -1.13
H2AFX-202ENST00000530167 LCE3AQ5TA76 89 aa7.95□□□□□ -1.14
H2AFX-202ENST00000530167 MUC12Q9UKN1 5478 aa7.9□□□□□ -1.15
H2AFX-202ENST00000530167 KRTAP19-7Q3SYF9 63 aa7.85□□□□□ -1.15
H2AFX-202ENST00000530167 KRTAP19-5Q3LI72 72 aa7.83□□□□□ -1.16
H2AFX-202ENST00000530167 SPRR2EP22531 72 aa7.78□□□□□ -1.16
H2AFX-202ENST00000530167 SPRR2BP35325 72 aa7.78□□□□□ -1.16
H2AFX-202ENST00000530167 SPRR2AP35326 72 aa7.78□□□□□ -1.16
H2AFX-202ENST00000530167 MT1EP04732 61 aa7.76□□□□□ -1.17
H2AFX-202ENST00000530167 LCE1AQ5T7P2 110 aa7.74□□□□□ -1.17
H2AFX-202ENST00000530167 KRTAP23-1A1A580 65 aa7.74□□□□□ -1.17
H2AFX-202ENST00000530167 MDN1Q9NU22 5596 aa7.73□□□□□ -1.17
H2AFX-202ENST00000530167 NEBP20929 6669 aa7.71□□□□□ -1.17
H2AFX-202ENST00000530167 SVIPQ8NHG7 77 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms