RNA–Protein interactions for RNA: ENST00000529563.5

USH1C-208, Transcript of USH1 protein network component harmonin, humanhuman

TSL 2

Gene USH1C, Length 942 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-208ENST00000529563 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
USH1C-208ENST00000529563 KRTAP19-6Q3LI70 58 aa5.82□□□□□ -1.48
USH1C-208ENST00000529563 SMIM20Q8N5G0 67 aa5.81□□□□□ -1.48
USH1C-208ENST00000529563 FAM236AA0A1B0GUQ0 79 aa5.8□□□□□ -1.48
USH1C-208ENST00000529563 FAM236BA0A1B0GV22 79 aa5.8□□□□□ -1.48
USH1C-208ENST00000529563 OCR1Q9BZK8 76 aa5.8□□□□□ -1.48
USH1C-208ENST00000529563 H3BPC8 53 aa5.77□□□□□ -1.49
USH1C-208ENST00000529563 TRAV7A0A075B6U4 112 aa5.73□□□□□ -1.49
USH1C-208ENST00000529563 S4R3F8 94 aa5.73□□□□□ -1.49
USH1C-208ENST00000529563 KRTAP6-3Q3LI67 103 aa5.69□□□□□ -1.5
USH1C-208ENST00000529563 A8MUN3 132 aa5.67□□□□□ -1.5
USH1C-208ENST00000529563 KLKP1Q107X0 134 aa5.67□□□□□ -1.5
USH1C-208ENST00000529563 CSAG1Q6PB30 78 aa5.67□□□□□ -1.5
USH1C-208ENST00000529563 KRTAP3-1Q9BYR8 98 aa5.65□□□□□ -1.5
USH1C-208ENST00000529563 NDUFC1O43677 76 aa5.63□□□□□ -1.51
USH1C-208ENST00000529563 LCA10Q71F78 164 aa5.63□□□□□ -1.51
USH1C-208ENST00000529563 SERP2Q8N6R1 65 aa5.63□□□□□ -1.51
USH1C-208ENST00000529563 C20orf197Q8N268 126 aa5.6□□□□□ -1.51
USH1C-208ENST00000529563 SNURFQ9Y675 71 aa5.6□□□□□ -1.51
USH1C-208ENST00000529563 A6NN06 94 aa5.58□□□□□ -1.52
USH1C-208ENST00000529563 NEBP20929 6669 aa5.58□□□□□ -1.52
USH1C-208ENST00000529563 ACYP2P14621 99 aa5.55□□□□□ -1.52
USH1C-208ENST00000529563 Q5VV11 94 aa5.54□□□□□ -1.52
USH1C-208ENST00000529563 DMAC1Q96GE9 116 aa5.54□□□□□ -1.52
USH1C-208ENST00000529563 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
USH1C-208ENST00000529563 CHKB-CPT1BH3BT56 60 aa5.52□□□□□ -1.53
USH1C-208ENST00000529563 COX7CP15954 63 aa5.52□□□□□ -1.53
USH1C-208ENST00000529563 ANAPC13Q9BS18 74 aa5.52□□□□□ -1.53
USH1C-208ENST00000529563 SPTSSBQ8NFR3 76 aa5.51□□□□□ -1.53
USH1C-208ENST00000529563 SPANXA2-OT1Q8N9U9 137 aa5.47□□□□□ -1.53
USH1C-208ENST00000529563 MT1BP07438 61 aa5.45□□□□□ -1.54
USH1C-208ENST00000529563 SPRR2GQ9BYE4 73 aa5.43□□□□□ -1.54
USH1C-208ENST00000529563 KRTAP19-8Q3LI54 63 aa5.42□□□□□ -1.54
USH1C-208ENST00000529563 ADM2Q7Z4H4 148 aa5.41□□□□□ -1.54
USH1C-208ENST00000529563 KRTAP10-5P60370 271 aa5.4□□□□□ -1.54
USH1C-208ENST00000529563 MUC12Q9UKN1 5478 aa5.39□□□□□ -1.55
USH1C-208ENST00000529563 H0YAA0 97 aa5.39□□□□□ -1.55
USH1C-208ENST00000529563 CRIPTQ9P021 101 aa5.38□□□□□ -1.55
USH1C-208ENST00000529563 H7BZZ5 65 aa5.33□□□□□ -1.56
USH1C-208ENST00000529563 COA5Q86WW8 74 aa5.32□□□□□ -1.56
USH1C-208ENST00000529563 CCDC179H3BU77 68 aa5.31□□□□□ -1.56
USH1C-208ENST00000529563 KRTAP5-9P26371 169 aa5.3□□□□□ -1.56
USH1C-208ENST00000529563 R4GN34 69 aa5.3□□□□□ -1.56
USH1C-208ENST00000529563 SEC61GP60059 68 aa5.29□□□□□ -1.56
USH1C-208ENST00000529563 CYSTM1Q9H1C7 97 aa5.27□□□□□ -1.57
USH1C-208ENST00000529563 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
USH1C-208ENST00000529563 ATP5EP56381 51 aaPredicted RBP5.26□□□□□ -1.57
USH1C-208ENST00000529563 KMT2DO14686 5537 aa5.25□□□□□ -1.57
USH1C-208ENST00000529563 MDN1Q9NU22 5596 aa5.25□□□□□ -1.57
USH1C-208ENST00000529563 M0QZ58 72 aa5.25□□□□□ -1.57
USH1C-208ENST00000529563 P0C880 135 aa5.24□□□□□ -1.57
USH1C-208ENST00000529563 SERP1Q9Y6X1 66 aa5.24□□□□□ -1.57
USH1C-208ENST00000529563 PRO2289Q9P1D8 64 aa5.22□□□□□ -1.57
USH1C-208ENST00000529563 KRTAP2-3P0C7H8 128 aa5.2□□□□□ -1.58
USH1C-208ENST00000529563 LINC01554Q52M75 96 aa5.2□□□□□ -1.58
USH1C-208ENST00000529563 SPRR2FQ96RM1 72 aa5.2□□□□□ -1.58
USH1C-208ENST00000529563 KRTAP2-4Q9BYR9 128 aa5.2□□□□□ -1.58
USH1C-208ENST00000529563 SPRR2EP22531 72 aa5.18□□□□□ -1.58
USH1C-208ENST00000529563 SPRR2BP35325 72 aa5.18□□□□□ -1.58
USH1C-208ENST00000529563 SPRR2AP35326 72 aa5.18□□□□□ -1.58
USH1C-208ENST00000529563 TMEM258P61165 79 aa5.18□□□□□ -1.58
USH1C-208ENST00000529563 PLAC4Q8WY50 150 aa5.18□□□□□ -1.58
USH1C-208ENST00000529563 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
USH1C-208ENST00000529563 A0A1B0GU69 56 aa5.11□□□□□ -1.59
USH1C-208ENST00000529563 PRR15LQ9BU68 103 aa5.09□□□□□ -1.59
USH1C-208ENST00000529563 MT1XP80297 61 aa5.07□□□□□ -1.6
USH1C-208ENST00000529563 A0A1B0GU33 70 aa5.06□□□□□ -1.6
USH1C-208ENST00000529563 KRTAP2-2Q9BYT5 123 aa5.03□□□□□ -1.6
USH1C-208ENST00000529563 KRTAP2-1Q9BYU5 128 aa5.03□□□□□ -1.6
USH1C-208ENST00000529563 SPRR2DP22532 72 aa5.01□□□□□ -1.61
USH1C-208ENST00000529563 LCE1AQ5T7P2 110 aa5.01□□□□□ -1.61
USH1C-208ENST00000529563 PCP4P48539 62 aa5□□□□□ -1.61
USH1C-208ENST00000529563 KRTAP12-2P59991 146 aa4.99□□□□□ -1.61
USH1C-208ENST00000529563 A0A0D9SG42 100 aa4.98□□□□□ -1.61
USH1C-208ENST00000529563 SMIM26A0A096LP01 95 aa4.96□□□□□ -1.62
USH1C-208ENST00000529563 SPATA8Q6RVD6 105 aa4.96□□□□□ -1.62
USH1C-208ENST00000529563 CAMK2N1Q7Z7J9 78 aa4.96□□□□□ -1.62
USH1C-208ENST00000529563 LINC01558Q9Y6Z2 57 aa4.95□□□□□ -1.62
USH1C-208ENST00000529563 KRTAP13-4Q3LI77 160 aa4.94□□□□□ -1.62
USH1C-208ENST00000529563 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
USH1C-208ENST00000529563 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
USH1C-208ENST00000529563 SPINT4Q6UDR6 99 aa4.92□□□□□ -1.62
USH1C-208ENST00000529563 V9GYY9 64 aa4.92□□□□□ -1.62
USH1C-208ENST00000529563 LCE3BQ5TA77 95 aa4.88□□□□□ -1.63
USH1C-208ENST00000529563 UQCR11O14957 56 aa4.87□□□□□ -1.63
USH1C-208ENST00000529563 KRTAP10-7P60409 375 aaPredicted RBP4.85□□□□□ -1.63
USH1C-208ENST00000529563 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
USH1C-208ENST00000529563 KRTAP4-6Q9BYQ5 205 aa4.83□□□□□ -1.64
USH1C-208ENST00000529563 A8MU10 97 aa4.81□□□□□ -1.64
USH1C-208ENST00000529563 PSPHP1O15172 72 aa4.81□□□□□ -1.64
USH1C-208ENST00000529563 KRTAP10-12P60413 245 aa4.81□□□□□ -1.64
USH1C-208ENST00000529563 Q1T7F1 81 aa4.8□□□□□ -1.64
USH1C-208ENST00000529563 KRTAP12-1P59990 96 aa4.78□□□□□ -1.64
USH1C-208ENST00000529563 RPS28P62857 69 aaKnown RBP4.77□□□□□ -1.65
USH1C-208ENST00000529563 MIR22HGQ0VDD5 57 aa4.77□□□□□ -1.65
USH1C-208ENST00000529563 K7ERS5 55 aa4.75□□□□□ -1.65
USH1C-208ENST00000529563 A6NED7 52 aa4.71□□□□□ -1.66
USH1C-208ENST00000529563 TNP1P09430 55 aa4.6□□□□□ -1.67
USH1C-208ENST00000529563 KRTAP4-9Q9BYQ8 210 aa4.58□□□□□ -1.68
USH1C-208ENST00000529563 DSTQ03001 7570 aaKnown RBP4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms