RNA–Protein interactions for RNA: ENST00000529386.5

CMTM1-212, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 924 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-212ENST00000529386 COX7CP15954 63 aa6.83□□□□□ -1.32
CMTM1-212ENST00000529386 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
CMTM1-212ENST00000529386 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
CMTM1-212ENST00000529386 CSAG1Q6PB30 78 aa6.8□□□□□ -1.32
CMTM1-212ENST00000529386 LCA10Q71F78 164 aa6.78□□□□□ -1.32
CMTM1-212ENST00000529386 DMAC1Q96GE9 116 aa6.78□□□□□ -1.32
CMTM1-212ENST00000529386 NDUFC1O43677 76 aa6.76□□□□□ -1.33
CMTM1-212ENST00000529386 ACYP2P14621 99 aa6.74□□□□□ -1.33
CMTM1-212ENST00000529386 SPANXA2-OT1Q8N9U9 137 aa6.74□□□□□ -1.33
CMTM1-212ENST00000529386 KRTAP9-8Q9BYQ0 159 aa6.72□□□□□ -1.33
CMTM1-212ENST00000529386 MT2AP02795 61 aa6.67□□□□□ -1.34
CMTM1-212ENST00000529386 KRTAP10-10P60014 251 aa6.67□□□□□ -1.34
CMTM1-212ENST00000529386 FSIP2Q5CZC0 6907 aa6.64□□□□□ -1.35
CMTM1-212ENST00000529386 CHKB-CPT1BH3BT56 60 aa6.64□□□□□ -1.35
CMTM1-212ENST00000529386 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
CMTM1-212ENST00000529386 H7BZZ5 65 aa6.61□□□□□ -1.35
CMTM1-212ENST00000529386 MT1FP04733 61 aa6.61□□□□□ -1.35
CMTM1-212ENST00000529386 CCDC179H3BU77 68 aa6.59□□□□□ -1.35
CMTM1-212ENST00000529386 H0YAA0 97 aa6.56□□□□□ -1.36
CMTM1-212ENST00000529386 CYSTM1Q9H1C7 97 aa6.56□□□□□ -1.36
CMTM1-212ENST00000529386 CRCT1Q9UGL9 99 aa6.56□□□□□ -1.36
CMTM1-212ENST00000529386 ATP5EP56381 51 aaPredicted RBP6.51□□□□□ -1.37
CMTM1-212ENST00000529386 COA5Q86WW8 74 aa6.5□□□□□ -1.37
CMTM1-212ENST00000529386 KRTAP9-3Q9BYQ3 159 aa6.5□□□□□ -1.37
CMTM1-212ENST00000529386 ADM2Q7Z4H4 148 aa6.49□□□□□ -1.37
CMTM1-212ENST00000529386 CRIPTQ9P021 101 aa6.49□□□□□ -1.37
CMTM1-212ENST00000529386 TMEM258P61165 79 aa6.45□□□□□ -1.38
CMTM1-212ENST00000529386 USH2AO75445 5202 aa6.38□□□□□ -1.39
CMTM1-212ENST00000529386 SEC61GP60059 68 aa6.36□□□□□ -1.39
CMTM1-212ENST00000529386 SPRR2GQ9BYE4 73 aa6.36□□□□□ -1.39
CMTM1-212ENST00000529386 P0C880 135 aa6.34□□□□□ -1.39
CMTM1-212ENST00000529386 R4GN34 69 aa6.34□□□□□ -1.39
CMTM1-212ENST00000529386 KRTAP19-1Q8IUB9 90 aa6.33□□□□□ -1.4
CMTM1-212ENST00000529386 SERP1Q9Y6X1 66 aa6.32□□□□□ -1.4
CMTM1-212ENST00000529386 PCP4P48539 62 aa6.31□□□□□ -1.4
CMTM1-212ENST00000529386 M0QZ58 72 aa6.28□□□□□ -1.4
CMTM1-212ENST00000529386 Q5VV11 94 aa6.28□□□□□ -1.4
CMTM1-212ENST00000529386 KRTAP19-8Q3LI54 63 aa6.24□□□□□ -1.41
CMTM1-212ENST00000529386 SSPOA2VEC9 5147 aa6.23□□□□□ -1.41
CMTM1-212ENST00000529386 A0A1B0GU69 56 aa6.21□□□□□ -1.42
CMTM1-212ENST00000529386 PRR15LQ9BU68 103 aa6.19□□□□□ -1.42
CMTM1-212ENST00000529386 LINC01554Q52M75 96 aa6.17□□□□□ -1.42
CMTM1-212ENST00000529386 MT1BP07438 61 aa6.15□□□□□ -1.42
CMTM1-212ENST00000529386 PLAC4Q8WY50 150 aa6.15□□□□□ -1.42
CMTM1-212ENST00000529386 A0A1B0GU33 70 aa6.14□□□□□ -1.43
CMTM1-212ENST00000529386 KRTAP9-7A8MTY7 169 aa6.14□□□□□ -1.43
CMTM1-212ENST00000529386 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
CMTM1-212ENST00000529386 LINC01558Q9Y6Z2 57 aa6.12□□□□□ -1.43
CMTM1-212ENST00000529386 KRTAP23-1A1A580 65 aa6.1□□□□□ -1.43
CMTM1-212ENST00000529386 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.1□□□□□ -1.43
CMTM1-212ENST00000529386 V9GYY9 64 aa6.08□□□□□ -1.44
CMTM1-212ENST00000529386 A6NN06 94 aa6.05□□□□□ -1.44
CMTM1-212ENST00000529386 FCGBPQ9Y6R7 5405 aaPredicted RBP6.05□□□□□ -1.44
CMTM1-212ENST00000529386 RPS28P62857 69 aaKnown RBP6.04□□□□□ -1.44
CMTM1-212ENST00000529386 KRTAP13-4Q3LI77 160 aa6.04□□□□□ -1.44
CMTM1-212ENST00000529386 SMIM26A0A096LP01 95 aa6.03□□□□□ -1.44
CMTM1-212ENST00000529386 PRO2289Q9P1D8 64 aa6.01□□□□□ -1.45
CMTM1-212ENST00000529386 SPATA8Q6RVD6 105 aa6□□□□□ -1.45
CMTM1-212ENST00000529386 Q1T7F1 81 aa5.99□□□□□ -1.45
CMTM1-212ENST00000529386 A0A0A0MQY5 61 aa5.98□□□□□ -1.45
CMTM1-212ENST00000529386 KRTAP10-5P60370 271 aa5.98□□□□□ -1.45
CMTM1-212ENST00000529386 A0A0D9SG42 100 aa5.97□□□□□ -1.45
CMTM1-212ENST00000529386 UQCR11O14957 56 aa5.95□□□□□ -1.46
CMTM1-212ENST00000529386 LOC100996750A0A140TA64 210 aa5.93□□□□□ -1.46
CMTM1-212ENST00000529386 KRTAP4-6Q9BYQ5 205 aa5.93□□□□□ -1.46
CMTM1-212ENST00000529386 CAMK2N1Q7Z7J9 78 aa5.91□□□□□ -1.46
CMTM1-212ENST00000529386 PSPHP1O15172 72 aa5.9□□□□□ -1.46
CMTM1-212ENST00000529386 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
CMTM1-212ENST00000529386 MACF1Q9UPN3 7388 aaKnown RBP5.87□□□□□ -1.47
CMTM1-212ENST00000529386 SYNE2Q8WXH0 6885 aaKnown RBP5.87□□□□□ -1.47
CMTM1-212ENST00000529386 MT1XP80297 61 aa5.87□□□□□ -1.47
CMTM1-212ENST00000529386 A8MU10 97 aa5.84□□□□□ -1.47
CMTM1-212ENST00000529386 KRTAP12-1P59990 96 aa5.83□□□□□ -1.48
CMTM1-212ENST00000529386 MIR22HGQ0VDD5 57 aa5.83□□□□□ -1.48
CMTM1-212ENST00000529386 KRTAP12-2P59991 146 aa5.78□□□□□ -1.48
CMTM1-212ENST00000529386 A6NED7 52 aa5.77□□□□□ -1.49
CMTM1-212ENST00000529386 K7ERS5 55 aa5.75□□□□□ -1.49
CMTM1-212ENST00000529386 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
CMTM1-212ENST00000529386 KRTAP10-7P60409 375 aaPredicted RBP5.6□□□□□ -1.51
CMTM1-212ENST00000529386 KRTAP10-12P60413 245 aa5.6□□□□□ -1.51
CMTM1-212ENST00000529386 CDC42SE1Q9NRR8 79 aa5.58□□□□□ -1.52
CMTM1-212ENST00000529386 KRTAP19-4Q3LI73 84 aa5.57□□□□□ -1.52
CMTM1-212ENST00000529386 KMT2DO14686 5537 aa5.55□□□□□ -1.52
CMTM1-212ENST00000529386 KRTAP8-1Q8IUC2 63 aa5.55□□□□□ -1.52
CMTM1-212ENST00000529386 MUC12Q9UKN1 5478 aa5.55□□□□□ -1.52
CMTM1-212ENST00000529386 TNP1P09430 55 aa5.54□□□□□ -1.52
CMTM1-212ENST00000529386 C10orf95Q9H7T3 257 aa5.52□□□□□ -1.53
CMTM1-212ENST00000529386 NEBP20929 6669 aa5.51□□□□□ -1.53
CMTM1-212ENST00000529386 KRTAP4-8A0A0G2JLE6 195 aa5.47□□□□□ -1.53
CMTM1-212ENST00000529386 KRTAP5-9P26371 169 aa5.47□□□□□ -1.53
CMTM1-212ENST00000529386 KRTAP4-8Q9BYQ9 185 aa5.47□□□□□ -1.53
CMTM1-212ENST00000529386 SPRR2FQ96RM1 72 aa5.43□□□□□ -1.54
CMTM1-212ENST00000529386 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
CMTM1-212ENST00000529386 KRTAP20-1Q3LI63 56 aa5.38□□□□□ -1.55
CMTM1-212ENST00000529386 MDN1Q9NU22 5596 aa5.37□□□□□ -1.55
CMTM1-212ENST00000529386 BRK1Q8WUW1 75 aa5.37□□□□□ -1.55
CMTM1-212ENST00000529386 ROMO1P60602 79 aa5.34□□□□□ -1.55
CMTM1-212ENST00000529386 LCE3AQ5TA76 89 aa5.29□□□□□ -1.56
CMTM1-212ENST00000529386 SPRR2EP22531 72 aa5.26□□□□□ -1.57
CMTM1-212ENST00000529386 SPRR2BP35325 72 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms