RNA–Protein interactions for RNA: ENST00000529167.5

C11orf88-203, Transcript of chromosome 11 open reading frame 88, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C11orf88, Length 3,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-203ENST00000529167 SRRM2Q9UQ35 2752 aaKnown RBP4.55□□□□□ -1.68
C11orf88-203ENST00000529167 PANO1I0J062 215 aa4.55□□□□□ -1.68
C11orf88-203ENST00000529167 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
C11orf88-203ENST00000529167 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
C11orf88-203ENST00000529167 SPINT4Q6UDR6 99 aa4.54□□□□□ -1.68
C11orf88-203ENST00000529167 KRTAP9-2Q9BYQ4 174 aa4.54□□□□□ -1.68
C11orf88-203ENST00000529167 KRTAP9-6A0A140TA67 174 aa4.52□□□□□ -1.69
C11orf88-203ENST00000529167 IGKV2D-30A0A075B6S6 120 aa4.51□□□□□ -1.69
C11orf88-203ENST00000529167 ANAPC11Q9NYG5 84 aa4.49□□□□□ -1.69
C11orf88-203ENST00000529167 FAT1Q14517 4588 aa4.48□□□□□ -1.69
C11orf88-203ENST00000529167 Q5VSD8 79 aa4.48□□□□□ -1.69
C11orf88-203ENST00000529167 SSBP3-AS1Q7Z2R9 100 aa4.48□□□□□ -1.69
C11orf88-203ENST00000529167 PSORS1C2Q9UIG4 136 aa4.48□□□□□ -1.69
C11orf88-203ENST00000529167 CIRBP-AS1Q8TBR5 109 aa4.46□□□□□ -1.7
C11orf88-203ENST00000529167 A0A1B0GU33 70 aa4.46□□□□□ -1.7
C11orf88-203ENST00000529167 K7ERS5 55 aa4.44□□□□□ -1.7
C11orf88-203ENST00000529167 UBE2DNLQ8IWF7 75 aa4.44□□□□□ -1.7
C11orf88-203ENST00000529167 KRTAP10-2P60368 255 aa4.43□□□□□ -1.7
C11orf88-203ENST00000529167 H1FX-AS1Q4G0G2 97 aa4.43□□□□□ -1.7
C11orf88-203ENST00000529167 KRTAP4-8A0A0G2JLE6 195 aa4.43□□□□□ -1.7
C11orf88-203ENST00000529167 NBDYA0A0U1RRE5 68 aa4.42□□□□□ -1.7
C11orf88-203ENST00000529167 TPRXLQ17RH7 258 aa4.42□□□□□ -1.7
C11orf88-203ENST00000529167 XP32Q5T750 250 aa4.41□□□□□ -1.7
C11orf88-203ENST00000529167 SPINK6Q6UWN8 80 aa4.41□□□□□ -1.7
C11orf88-203ENST00000529167 C14orf177Q52M58 125 aa4.41□□□□□ -1.7
C11orf88-203ENST00000529167 TYMSOSQ8TAI1 123 aa4.4□□□□□ -1.71
C11orf88-203ENST00000529167 SPINK1P00995 79 aa4.38□□□□□ -1.71
C11orf88-203ENST00000529167 RNF213Q63HN8 5207 aa4.37□□□□□ -1.71
C11orf88-203ENST00000529167 LCE3BQ5TA77 95 aa4.36□□□□□ -1.71
C11orf88-203ENST00000529167 PKHD1L1Q86WI1 4243 aa4.35□□□□□ -1.71
C11orf88-203ENST00000529167 FAT3Q8TDW7 4589 aa4.35□□□□□ -1.71
C11orf88-203ENST00000529167 DNAH8Q96JB1 4490 aa4.35□□□□□ -1.71
C11orf88-203ENST00000529167 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
C11orf88-203ENST00000529167 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
C11orf88-203ENST00000529167 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.72
C11orf88-203ENST00000529167 KRTAP1-5Q9BYS1 174 aa4.34□□□□□ -1.72
C11orf88-203ENST00000529167 SMR3BP02814 79 aaPredicted RBP4.33□□□□□ -1.72
C11orf88-203ENST00000529167 C10orf95Q9H7T3 257 aa4.32□□□□□ -1.72
C11orf88-203ENST00000529167 KRTAP9-9Q9BYP9 154 aa4.31□□□□□ -1.72
C11orf88-203ENST00000529167 KRTAP9-4Q9BYQ2 154 aa4.31□□□□□ -1.72
C11orf88-203ENST00000529167 LRP1Q07954 4544 aaKnown RBP4.31□□□□□ -1.72
C11orf88-203ENST00000529167 COX6B2Q6YFQ2 88 aa4.3□□□□□ -1.72
C11orf88-203ENST00000529167 KRTAP3-1Q9BYR8 98 aa4.3□□□□□ -1.72
C11orf88-203ENST00000529167 SPACA4Q8TDM5 124 aa4.3□□□□□ -1.72
C11orf88-203ENST00000529167 RPL37P61927 97 aaKnown RBP4.29□□□□□ -1.72
C11orf88-203ENST00000529167 TNXBP22105 4242 aa4.28□□□□□ -1.72
C11orf88-203ENST00000529167 KRTAP10-4P60372 401 aaPredicted RBP4.27□□□□□ -1.73
C11orf88-203ENST00000529167 LRP2P98164 4655 aa4.25□□□□□ -1.73
C11orf88-203ENST00000529167 KRTAP4-12Q9BQ66 201 aa4.24□□□□□ -1.73
C11orf88-203ENST00000529167 MT1HL1P0DM35 61 aa4.22□□□□□ -1.73
C11orf88-203ENST00000529167 FAT4Q6V0I7 4981 aa4.19□□□□□ -1.74
C11orf88-203ENST00000529167 KRTAP10-6P60371 365 aaPredicted RBP4.16□□□□□ -1.74
C11orf88-203ENST00000529167 KRTAP13-4Q3LI77 160 aa4.16□□□□□ -1.74
C11orf88-203ENST00000529167 LCE1DQ5T752 114 aa4.14□□□□□ -1.75
C11orf88-203ENST00000529167 KRTAP13-2Q52LG2 175 aa4.13□□□□□ -1.75
C11orf88-203ENST00000529167 KRTAP4-9Q9BYQ8 210 aa4.12□□□□□ -1.75
C11orf88-203ENST00000529167 KRTAP4-2Q9BYR5 136 aa4.11□□□□□ -1.75
C11orf88-203ENST00000529167 S4R3F8 94 aa4.11□□□□□ -1.75
C11orf88-203ENST00000529167 KRTAP5-3Q6L8H2 238 aa4.11□□□□□ -1.75
C11orf88-203ENST00000529167 A0A0D9SG42 100 aa4.08□□□□□ -1.76
C11orf88-203ENST00000529167 CAMK2N1Q7Z7J9 78 aa4.08□□□□□ -1.76
C11orf88-203ENST00000529167 KRTAP12-2P59991 146 aa4.06□□□□□ -1.76
C11orf88-203ENST00000529167 KRTAP9-8Q9BYQ0 159 aa4.06□□□□□ -1.76
C11orf88-203ENST00000529167 MUC2Q02817 5179 aa4.05□□□□□ -1.76
C11orf88-203ENST00000529167 PLAC4Q8WY50 150 aa4.05□□□□□ -1.76
C11orf88-203ENST00000529167 CRCT1Q9UGL9 99 aa4.03□□□□□ -1.76
C11orf88-203ENST00000529167 KRTAP12-1P59990 96 aa4.02□□□□□ -1.77
C11orf88-203ENST00000529167 KRTAP10-8P60410 259 aa4.02□□□□□ -1.77
C11orf88-203ENST00000529167 LPAP08519 4548 aa4.01□□□□□ -1.77
C11orf88-203ENST00000529167 KRTAP1-4P0C5Y4 121 aa4.01□□□□□ -1.77
C11orf88-203ENST00000529167 RPS29P62273 56 aaKnown RBP4□□□□□ -1.77
C11orf88-203ENST00000529167 PRO2289Q9P1D8 64 aa3.93□□□□□ -1.78
C11orf88-203ENST00000529167 KRTAP19-1Q8IUB9 90 aa3.91□□□□□ -1.78
C11orf88-203ENST00000529167 MUC17Q685J3 4493 aa3.9□□□□□ -1.79
C11orf88-203ENST00000529167 R4GN34 69 aa3.88□□□□□ -1.79
C11orf88-203ENST00000529167 M0QZ58 72 aa3.87□□□□□ -1.79
C11orf88-203ENST00000529167 C9orf92A6NGG3 77 aa3.87□□□□□ -1.79
C11orf88-203ENST00000529167 KRTAP9-7A8MTY7 169 aa3.84□□□□□ -1.79
C11orf88-203ENST00000529167 KRTAP4-11Q9BYQ6 195 aa3.84□□□□□ -1.8
C11orf88-203ENST00000529167 FSIP2Q5CZC0 6907 aa3.82□□□□□ -1.8
C11orf88-203ENST00000529167 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
C11orf88-203ENST00000529167 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
C11orf88-203ENST00000529167 INE1O15225 51 aa3.71□□□□□ -1.82
C11orf88-203ENST00000529167 KRTAP19-4Q3LI73 84 aa3.67□□□□□ -1.82
C11orf88-203ENST00000529167 KRTAP4-1Q9BYQ7 146 aa3.64□□□□□ -1.83
C11orf88-203ENST00000529167 MT1HP80294 61 aa3.62□□□□□ -1.83
C11orf88-203ENST00000529167 KRTAP19-2Q3LHN2 52 aa3.62□□□□□ -1.83
C11orf88-203ENST00000529167 SSPOA2VEC9 5147 aa3.58□□□□□ -1.84
C11orf88-203ENST00000529167 FCGBPQ9Y6R7 5405 aaPredicted RBP3.53□□□□□ -1.84
C11orf88-203ENST00000529167 USH2AO75445 5202 aa3.51□□□□□ -1.85
C11orf88-203ENST00000529167 LCE5AQ5TCM9 118 aa3.49□□□□□ -1.85
C11orf88-203ENST00000529167 FLGP20930 4061 aaPredicted RBP3.48□□□□□ -1.85
C11orf88-203ENST00000529167 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
C11orf88-203ENST00000529167 MACF1Q9UPN3 7388 aaKnown RBP3.44□□□□□ -1.86
C11orf88-203ENST00000529167 TNP1P09430 55 aa3.43□□□□□ -1.86
C11orf88-203ENST00000529167 SYNE2Q8WXH0 6885 aaKnown RBP3.43□□□□□ -1.86
C11orf88-203ENST00000529167 M0R2T5 61 aa3.42□□□□□ -1.86
C11orf88-203ENST00000529167 LCE4AQ5TA78 99 aa3.39□□□□□ -1.87
C11orf88-203ENST00000529167 NEBP20929 6669 aa3.38□□□□□ -1.87
C11orf88-203ENST00000529167 KRTAP20-1Q3LI63 56 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms