RNA–Protein interactions for RNA: ENST00000528730.1

PDZD3-209, Transcript of PDZ domain containing 3, humanhuman

TSL 3

Gene PDZD3, Length 584 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-209ENST00000528730 RBM12B-AS1Q9P1G2 102 aa6.69□□□□□ -1.34
PDZD3-209ENST00000528730 C4orf26Q17RF5 130 aa6.68□□□□□ -1.34
PDZD3-209ENST00000528730 KRTAP10-6P60371 365 aaPredicted RBP6.67□□□□□ -1.34
PDZD3-209ENST00000528730 COA5Q86WW8 74 aa6.65□□□□□ -1.34
PDZD3-209ENST00000528730 SMIM26A0A096LP01 95 aa6.62□□□□□ -1.35
PDZD3-209ENST00000528730 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
PDZD3-209ENST00000528730 CHKB-CPT1BH3BT56 60 aa6.61□□□□□ -1.35
PDZD3-209ENST00000528730 LCE2DQ5TA82 110 aaPredicted RBP6.6□□□□□ -1.35
PDZD3-209ENST00000528730 MPLKIPQ8TAP9 179 aa6.58□□□□□ -1.36
PDZD3-209ENST00000528730 SPTSSBQ8NFR3 76 aa6.57□□□□□ -1.36
PDZD3-209ENST00000528730 KRTAP3-1Q9BYR8 98 aa6.57□□□□□ -1.36
PDZD3-209ENST00000528730 V9GYY9 64 aa6.55□□□□□ -1.36
PDZD3-209ENST00000528730 FLGP20930 4061 aaPredicted RBP6.54□□□□□ -1.36
PDZD3-209ENST00000528730 H1FX-AS1Q4G0G2 97 aa6.52□□□□□ -1.37
PDZD3-209ENST00000528730 Q1T7F1 81 aa6.49□□□□□ -1.37
PDZD3-209ENST00000528730 S4R3F8 94 aa6.46□□□□□ -1.38
PDZD3-209ENST00000528730 CRCT1Q9UGL9 99 aa6.45□□□□□ -1.38
PDZD3-209ENST00000528730 LINC01558Q9Y6Z2 57 aa6.43□□□□□ -1.38
PDZD3-209ENST00000528730 KRTAP9-8Q9BYQ0 159 aa6.41□□□□□ -1.38
PDZD3-209ENST00000528730 FSIP2Q5CZC0 6907 aa6.39□□□□□ -1.39
PDZD3-209ENST00000528730 LCA10Q71F78 164 aa6.39□□□□□ -1.39
PDZD3-209ENST00000528730 PRR15LQ9BU68 103 aa6.39□□□□□ -1.39
PDZD3-209ENST00000528730 MT2AP02795 61 aa6.38□□□□□ -1.39
PDZD3-209ENST00000528730 KRTAP10-10P60014 251 aa6.38□□□□□ -1.39
PDZD3-209ENST00000528730 SEC61GP60059 68 aa6.36□□□□□ -1.39
PDZD3-209ENST00000528730 CSAG1Q6PB30 78 aa6.36□□□□□ -1.39
PDZD3-209ENST00000528730 KRTAP3-3Q9BYR6 98 aa6.35□□□□□ -1.39
PDZD3-209ENST00000528730 A0A1B0GU69 56 aa6.34□□□□□ -1.39
PDZD3-209ENST00000528730 MT1FP04733 61 aa6.32□□□□□ -1.4
PDZD3-209ENST00000528730 PSPHP1O15172 72 aa6.29□□□□□ -1.4
PDZD3-209ENST00000528730 Q5VV11 94 aa6.25□□□□□ -1.41
PDZD3-209ENST00000528730 H0YAA0 97 aa6.23□□□□□ -1.41
PDZD3-209ENST00000528730 KRTAP9-3Q9BYQ3 159 aa6.2□□□□□ -1.42
PDZD3-209ENST00000528730 LCE2BO14633 110 aa6.17□□□□□ -1.42
PDZD3-209ENST00000528730 UQCR11O14957 56 aa6.17□□□□□ -1.42
PDZD3-209ENST00000528730 A6NED7 52 aa6.16□□□□□ -1.42
PDZD3-209ENST00000528730 A0A1B0GU33 70 aa6.14□□□□□ -1.43
PDZD3-209ENST00000528730 ADM2Q7Z4H4 148 aa6.13□□□□□ -1.43
PDZD3-209ENST00000528730 KRTAP3-2Q9BYR7 98 aa6.12□□□□□ -1.43
PDZD3-209ENST00000528730 USH2AO75445 5202 aa6.09□□□□□ -1.43
PDZD3-209ENST00000528730 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
PDZD3-209ENST00000528730 MIR22HGQ0VDD5 57 aa6.07□□□□□ -1.44
PDZD3-209ENST00000528730 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
PDZD3-209ENST00000528730 CDC42SE1Q9NRR8 79 aa6.07□□□□□ -1.44
PDZD3-209ENST00000528730 BRK1Q8WUW1 75 aa6.06□□□□□ -1.44
PDZD3-209ENST00000528730 KRTAP9-7A8MTY7 169 aa6.05□□□□□ -1.44
PDZD3-209ENST00000528730 P0C880 135 aa6.05□□□□□ -1.44
PDZD3-209ENST00000528730 M0QZ58 72 aa6.04□□□□□ -1.44
PDZD3-209ENST00000528730 CRIPTQ9P021 101 aa6.01□□□□□ -1.45
PDZD3-209ENST00000528730 KRTAP9-1A8MXZ3 250 aaPredicted RBP6□□□□□ -1.45
PDZD3-209ENST00000528730 SSPOA2VEC9 5147 aa6□□□□□ -1.45
PDZD3-209ENST00000528730 SVIPQ8NHG7 77 aa5.97□□□□□ -1.45
PDZD3-209ENST00000528730 PRO0628Q9UI54 55 aa5.97□□□□□ -1.45
PDZD3-209ENST00000528730 R4GN34 69 aa5.97□□□□□ -1.45
PDZD3-209ENST00000528730 KRTAP19-6Q3LI70 58 aa5.95□□□□□ -1.46
PDZD3-209ENST00000528730 FCGBPQ9Y6R7 5405 aaPredicted RBP5.91□□□□□ -1.46
PDZD3-209ENST00000528730 KRTAP13-4Q3LI77 160 aa5.9□□□□□ -1.46
PDZD3-209ENST00000528730 K7ERS5 55 aa5.88□□□□□ -1.47
PDZD3-209ENST00000528730 A8MU10 97 aa5.86□□□□□ -1.47
PDZD3-209ENST00000528730 SPRR2GQ9BYE4 73 aa5.86□□□□□ -1.47
PDZD3-209ENST00000528730 A0A0D9SG42 100 aa5.82□□□□□ -1.48
PDZD3-209ENST00000528730 A6NN06 94 aa5.81□□□□□ -1.48
PDZD3-209ENST00000528730 MT1BP07438 61 aa5.81□□□□□ -1.48
PDZD3-209ENST00000528730 KRTAP19-8Q3LI54 63 aa5.8□□□□□ -1.48
PDZD3-209ENST00000528730 LINC01554Q52M75 96 aa5.78□□□□□ -1.48
PDZD3-209ENST00000528730 PMAIP1Q13794 54 aa5.76□□□□□ -1.49
PDZD3-209ENST00000528730 MACF1Q9UPN3 7388 aaKnown RBP5.75□□□□□ -1.49
PDZD3-209ENST00000528730 SPINT4Q6UDR6 99 aa5.74□□□□□ -1.49
PDZD3-209ENST00000528730 KRTAP12-1P59990 96 aa5.73□□□□□ -1.49
PDZD3-209ENST00000528730 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
PDZD3-209ENST00000528730 SYNE2Q8WXH0 6885 aaKnown RBP5.69□□□□□ -1.5
PDZD3-209ENST00000528730 KRTAP10-5P60370 271 aa5.67□□□□□ -1.5
PDZD3-209ENST00000528730 PLAC4Q8WY50 150 aa5.65□□□□□ -1.5
PDZD3-209ENST00000528730 KRTAP6-3Q3LI67 103 aa5.61□□□□□ -1.51
PDZD3-209ENST00000528730 PRO2289Q9P1D8 64 aa5.59□□□□□ -1.51
PDZD3-209ENST00000528730 CAMK2N1Q7Z7J9 78 aa5.58□□□□□ -1.52
PDZD3-209ENST00000528730 ROMO1P60602 79 aa5.57□□□□□ -1.52
PDZD3-209ENST00000528730 KTN1-AS1Q86SY8 53 aa5.53□□□□□ -1.52
PDZD3-209ENST00000528730 MT1XP80297 61 aa5.47□□□□□ -1.53
PDZD3-209ENST00000528730 C10orf95Q9H7T3 257 aa5.41□□□□□ -1.54
PDZD3-209ENST00000528730 KRTAP25-1Q3LHN0 102 aa5.37□□□□□ -1.55
PDZD3-209ENST00000528730 KRTAP5-9P26371 169 aa5.35□□□□□ -1.55
PDZD3-209ENST00000528730 TNP1P09430 55 aa5.34□□□□□ -1.55
PDZD3-209ENST00000528730 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
PDZD3-209ENST00000528730 SPRR2FQ96RM1 72 aa5.32□□□□□ -1.56
PDZD3-209ENST00000528730 NEBP20929 6669 aa5.32□□□□□ -1.56
PDZD3-209ENST00000528730 PRAC1Q96KF2 57 aa5.29□□□□□ -1.56
PDZD3-209ENST00000528730 KRTAP20-1Q3LI63 56 aa5.28□□□□□ -1.56
PDZD3-209ENST00000528730 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
PDZD3-209ENST00000528730 KRTAP23-1A1A580 65 aa5.25□□□□□ -1.57
PDZD3-209ENST00000528730 KRTAP10-7P60409 375 aaPredicted RBP5.25□□□□□ -1.57
PDZD3-209ENST00000528730 KMT2DO14686 5537 aa5.24□□□□□ -1.57
PDZD3-209ENST00000528730 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
PDZD3-209ENST00000528730 SPRR2EP22531 72 aa5.23□□□□□ -1.57
PDZD3-209ENST00000528730 SPRR2BP35325 72 aa5.23□□□□□ -1.57
PDZD3-209ENST00000528730 SPRR2AP35326 72 aa5.23□□□□□ -1.57
PDZD3-209ENST00000528730 PP632Q6XCG6 107 aa5.23□□□□□ -1.57
PDZD3-209ENST00000528730 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
PDZD3-209ENST00000528730 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
PDZD3-209ENST00000528730 MDN1Q9NU22 5596 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms