RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 ANAPC13Q9BS18 74 aa8.54□□□□□ -1.04
CCS-204ENST00000526066 H1FX-AS1Q4G0G2 97 aa8.52□□□□□ -1.05
CCS-204ENST00000526066 FCGBPQ9Y6R7 5405 aaPredicted RBP8.52□□□□□ -1.05
CCS-204ENST00000526066 SNURFQ9Y675 71 aa8.51□□□□□ -1.05
CCS-204ENST00000526066 KRTAP3-1Q9BYR8 98 aa8.5□□□□□ -1.05
CCS-204ENST00000526066 A8MUN3 132 aa8.45□□□□□ -1.06
CCS-204ENST00000526066 MT2AP02795 61 aa8.44□□□□□ -1.06
CCS-204ENST00000526066 KRTAP19-1Q8IUB9 90 aa8.44□□□□□ -1.06
CCS-204ENST00000526066 KRTAP10-10P60014 251 aa8.4□□□□□ -1.06
CCS-204ENST00000526066 NDUFC1O43677 76 aa8.38□□□□□ -1.07
CCS-204ENST00000526066 DMAC1Q96GE9 116 aa8.38□□□□□ -1.07
CCS-204ENST00000526066 SPANXA2-OT1Q8N9U9 137 aa8.37□□□□□ -1.07
CCS-204ENST00000526066 LCE2BO14633 110 aa8.36□□□□□ -1.07
CCS-204ENST00000526066 MT1FP04733 61 aa8.36□□□□□ -1.07
CCS-204ENST00000526066 SYNE2Q8WXH0 6885 aaKnown RBP8.34□□□□□ -1.07
CCS-204ENST00000526066 CCDC179H3BU77 68 aa8.34□□□□□ -1.07
CCS-204ENST00000526066 S4R3F8 94 aa8.34□□□□□ -1.07
CCS-204ENST00000526066 MACF1Q9UPN3 7388 aaKnown RBP8.34□□□□□ -1.07
CCS-204ENST00000526066 H7BZZ5 65 aa8.32□□□□□ -1.08
CCS-204ENST00000526066 CYSTM1Q9H1C7 97 aa8.32□□□□□ -1.08
CCS-204ENST00000526066 KRTAP9-3Q9BYQ3 159 aa8.31□□□□□ -1.08
CCS-204ENST00000526066 LCA10Q71F78 164 aa8.28□□□□□ -1.08
CCS-204ENST00000526066 ACYP2P14621 99 aa8.27□□□□□ -1.09
CCS-204ENST00000526066 KRTAP3-3Q9BYR6 98 aa8.24□□□□□ -1.09
CCS-204ENST00000526066 CSAG1Q6PB30 78 aa8.22□□□□□ -1.09
CCS-204ENST00000526066 KRTAP19-6Q3LI70 58 aa8.18□□□□□ -1.1
CCS-204ENST00000526066 PCP4P48539 62 aa8.16□□□□□ -1.1
CCS-204ENST00000526066 KRTAP6-3Q3LI67 103 aa8.15□□□□□ -1.1
CCS-204ENST00000526066 ATP5EP56381 51 aaPredicted RBP8.12□□□□□ -1.11
CCS-204ENST00000526066 CHKB-CPT1BH3BT56 60 aa8.1□□□□□ -1.11
CCS-204ENST00000526066 TMEM258P61165 79 aa8.1□□□□□ -1.11
CCS-204ENST00000526066 COA5Q86WW8 74 aa8.08□□□□□ -1.12
CCS-204ENST00000526066 SPTSSBQ8NFR3 76 aa8.07□□□□□ -1.12
CCS-204ENST00000526066 H0YAA0 97 aa8.02□□□□□ -1.13
CCS-204ENST00000526066 ADM2Q7Z4H4 148 aa7.9□□□□□ -1.14
CCS-204ENST00000526066 NEBP20929 6669 aa7.86□□□□□ -1.15
CCS-204ENST00000526066 KRTAP3-2Q9BYR7 98 aa7.84□□□□□ -1.15
CCS-204ENST00000526066 SERP1Q9Y6X1 66 aa7.84□□□□□ -1.15
CCS-204ENST00000526066 CRIPTQ9P021 101 aa7.83□□□□□ -1.16
CCS-204ENST00000526066 KRTAP20-1Q3LI63 56 aa7.81□□□□□ -1.16
CCS-204ENST00000526066 P0C880 135 aa7.8□□□□□ -1.16
CCS-204ENST00000526066 A6NN06 94 aa7.75□□□□□ -1.17
CCS-204ENST00000526066 SPRR2GQ9BYE4 73 aa7.75□□□□□ -1.17
CCS-204ENST00000526066 MUC12Q9UKN1 5478 aa7.74□□□□□ -1.17
CCS-204ENST00000526066 SEC61GP60059 68 aa7.73□□□□□ -1.17
CCS-204ENST00000526066 R4GN34 69 aa7.66□□□□□ -1.18
CCS-204ENST00000526066 A0A1B0GU69 56 aa7.65□□□□□ -1.18
CCS-204ENST00000526066 RPS28P62857 69 aaKnown RBP7.65□□□□□ -1.18
CCS-204ENST00000526066 LINC01558Q9Y6Z2 57 aa7.65□□□□□ -1.18
CCS-204ENST00000526066 Q5VV11 94 aa7.63□□□□□ -1.19
CCS-204ENST00000526066 M0QZ58 72 aa7.62□□□□□ -1.19
CCS-204ENST00000526066 KRTAP19-8Q3LI54 63 aa7.62□□□□□ -1.19
CCS-204ENST00000526066 PRR15LQ9BU68 103 aa7.59□□□□□ -1.19
CCS-204ENST00000526066 SMIM26A0A096LP01 95 aa7.58□□□□□ -1.2
CCS-204ENST00000526066 V9GYY9 64 aa7.56□□□□□ -1.2
CCS-204ENST00000526066 A0A1B0GU33 70 aa7.55□□□□□ -1.2
CCS-204ENST00000526066 MT1BP07438 61 aa7.54□□□□□ -1.2
CCS-204ENST00000526066 Q1T7F1 81 aa7.53□□□□□ -1.2
CCS-204ENST00000526066 KRTAP5-9P26371 169 aa7.51□□□□□ -1.21
CCS-204ENST00000526066 KRTAP10-5P60370 271 aa7.5□□□□□ -1.21
CCS-204ENST00000526066 KRTAP13-4Q3LI77 160 aa7.5□□□□□ -1.21
CCS-204ENST00000526066 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
CCS-204ENST00000526066 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
CCS-204ENST00000526066 LINC01554Q52M75 96 aa7.46□□□□□ -1.22
CCS-204ENST00000526066 MDN1Q9NU22 5596 aa7.45□□□□□ -1.22
CCS-204ENST00000526066 KMT2DO14686 5537 aa7.42□□□□□ -1.22
CCS-204ENST00000526066 SPATA8Q6RVD6 105 aa7.41□□□□□ -1.22
CCS-204ENST00000526066 PSPHP1O15172 72 aa7.37□□□□□ -1.23
CCS-204ENST00000526066 PLAC4Q8WY50 150 aa7.37□□□□□ -1.23
CCS-204ENST00000526066 UQCR11O14957 56 aa7.35□□□□□ -1.23
CCS-204ENST00000526066 A0A0D9SG42 100 aa7.3□□□□□ -1.24
CCS-204ENST00000526066 SPRR2EP22531 72 aa7.25□□□□□ -1.25
CCS-204ENST00000526066 SPRR2BP35325 72 aa7.25□□□□□ -1.25
CCS-204ENST00000526066 SPRR2AP35326 72 aa7.25□□□□□ -1.25
CCS-204ENST00000526066 SPRR2FQ96RM1 72 aa7.25□□□□□ -1.25
CCS-204ENST00000526066 A8MU10 97 aa7.24□□□□□ -1.25
CCS-204ENST00000526066 KRTAP12-1P59990 96 aa7.22□□□□□ -1.25
CCS-204ENST00000526066 MIR22HGQ0VDD5 57 aa7.22□□□□□ -1.25
CCS-204ENST00000526066 KRTAP2-2Q9BYT5 123 aa7.21□□□□□ -1.26
CCS-204ENST00000526066 KRTAP2-1Q9BYU5 128 aa7.21□□□□□ -1.26
CCS-204ENST00000526066 MT1XP80297 61 aa7.18□□□□□ -1.26
CCS-204ENST00000526066 PRO2289Q9P1D8 64 aa7.18□□□□□ -1.26
CCS-204ENST00000526066 A6NED7 52 aa7.17□□□□□ -1.26
CCS-204ENST00000526066 SPINT4Q6UDR6 99 aa7.17□□□□□ -1.26
CCS-204ENST00000526066 KRTAP12-2P59991 146 aa7.15□□□□□ -1.26
CCS-204ENST00000526066 CAMK2N1Q7Z7J9 78 aa7.13□□□□□ -1.27
CCS-204ENST00000526066 KRTAP8-1Q8IUC2 63 aa7.1□□□□□ -1.27
CCS-204ENST00000526066 SPRR2DP22532 72 aa7.02□□□□□ -1.29
CCS-204ENST00000526066 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
CCS-204ENST00000526066 CDC42SE1Q9NRR8 79 aa7□□□□□ -1.29
CCS-204ENST00000526066 K7ERS5 55 aa6.99□□□□□ -1.29
CCS-204ENST00000526066 LCE3BQ5TA77 95 aa6.85□□□□□ -1.31
CCS-204ENST00000526066 KRTAP10-7P60409 375 aaPredicted RBP6.84□□□□□ -1.31
CCS-204ENST00000526066 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.31
CCS-204ENST00000526066 KRTAP10-12P60413 245 aa6.83□□□□□ -1.32
CCS-204ENST00000526066 PRO0628Q9UI54 55 aa6.81□□□□□ -1.32
CCS-204ENST00000526066 KRTAP4-8A0A0G2JLE6 195 aa6.8□□□□□ -1.32
CCS-204ENST00000526066 KRTAP4-8Q9BYQ9 185 aa6.8□□□□□ -1.32
CCS-204ENST00000526066 BRK1Q8WUW1 75 aa6.77□□□□□ -1.33
CCS-204ENST00000526066 GPR98Q8WXG9 6306 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms