RNA–Protein interactions for RNA: ENST00000525854.5

HIF3A-209, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 5

Gene HIF3A, Length 767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-209ENST00000525854 S4R3F8 94 aa5.37□□□□□ -1.55
HIF3A-209ENST00000525854 TRAV22A0A0B4J277 110 aa5.36□□□□□ -1.55
HIF3A-209ENST00000525854 CSAG1Q6PB30 78 aa5.36□□□□□ -1.55
HIF3A-209ENST00000525854 SERP2Q8N6R1 65 aa5.36□□□□□ -1.55
HIF3A-209ENST00000525854 KRTAP3-1Q9BYR8 98 aa5.36□□□□□ -1.55
HIF3A-209ENST00000525854 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
HIF3A-209ENST00000525854 OCR1Q9BZK8 76 aa5.32□□□□□ -1.56
HIF3A-209ENST00000525854 LOC101927531A0A1B0GV80 90 aa5.31□□□□□ -1.56
HIF3A-209ENST00000525854 H0Y9P7 68 aa5.31□□□□□ -1.56
HIF3A-209ENST00000525854 LCA10Q71F78 164 aa5.31□□□□□ -1.56
HIF3A-209ENST00000525854 COX7CP15954 63 aa5.3□□□□□ -1.56
HIF3A-209ENST00000525854 NDUFC1O43677 76 aa5.28□□□□□ -1.56
HIF3A-209ENST00000525854 CYP4F30PQ9H0H9 118 aa5.28□□□□□ -1.56
HIF3A-209ENST00000525854 LINC00208Q96KT6 92 aa5.26□□□□□ -1.57
HIF3A-209ENST00000525854 Q5VV11 94 aa5.25□□□□□ -1.57
HIF3A-209ENST00000525854 SPRR2GQ9BYE4 73 aa5.25□□□□□ -1.57
HIF3A-209ENST00000525854 KRTAP6-3Q3LI67 103 aa5.24□□□□□ -1.57
HIF3A-209ENST00000525854 KLKP1Q107X0 134 aa5.23□□□□□ -1.57
HIF3A-209ENST00000525854 C20orf197Q8N268 126 aa5.23□□□□□ -1.57
HIF3A-209ENST00000525854 A6NN06 94 aa5.22□□□□□ -1.57
HIF3A-209ENST00000525854 KRTAP19-8Q3LI54 63 aa5.22□□□□□ -1.57
HIF3A-209ENST00000525854 MT1BP07438 61 aa5.21□□□□□ -1.58
HIF3A-209ENST00000525854 KRTAP3-3Q9BYR6 98 aa5.21□□□□□ -1.58
HIF3A-209ENST00000525854 PCP4P48539 62 aa5.19□□□□□ -1.58
HIF3A-209ENST00000525854 CRIPTQ9P021 101 aa5.19□□□□□ -1.58
HIF3A-209ENST00000525854 SNURFQ9Y675 71 aa5.16□□□□□ -1.58
HIF3A-209ENST00000525854 ATP5EP56381 51 aaPredicted RBP5.14□□□□□ -1.59
HIF3A-209ENST00000525854 A8MUN3 132 aa5.13□□□□□ -1.59
HIF3A-209ENST00000525854 KRTAP10-5P60370 271 aa5.13□□□□□ -1.59
HIF3A-209ENST00000525854 SPANXA2-OT1Q8N9U9 137 aa5.13□□□□□ -1.59
HIF3A-209ENST00000525854 CCDC179H3BU77 68 aa5.11□□□□□ -1.59
HIF3A-209ENST00000525854 H0YAA0 97 aa5.1□□□□□ -1.59
HIF3A-209ENST00000525854 TMEM258P61165 79 aa5.1□□□□□ -1.59
HIF3A-209ENST00000525854 ACYP2P14621 99 aa5.08□□□□□ -1.6
HIF3A-209ENST00000525854 NEBP20929 6669 aa5.06□□□□□ -1.6
HIF3A-209ENST00000525854 H7BZZ5 65 aa5.05□□□□□ -1.6
HIF3A-209ENST00000525854 SPTSSBQ8NFR3 76 aa5.05□□□□□ -1.6
HIF3A-209ENST00000525854 ADM2Q7Z4H4 148 aa5.04□□□□□ -1.6
HIF3A-209ENST00000525854 CHKB-CPT1BH3BT56 60 aa5.03□□□□□ -1.6
HIF3A-209ENST00000525854 DMAC1Q96GE9 116 aa5.02□□□□□ -1.61
HIF3A-209ENST00000525854 MUC12Q9UKN1 5478 aa5□□□□□ -1.61
HIF3A-209ENST00000525854 KRTAP5-9P26371 169 aa4.97□□□□□ -1.61
HIF3A-209ENST00000525854 PRO2289Q9P1D8 64 aa4.96□□□□□ -1.62
HIF3A-209ENST00000525854 PLAC4Q8WY50 150 aa4.94□□□□□ -1.62
HIF3A-209ENST00000525854 R4GN34 69 aa4.94□□□□□ -1.62
HIF3A-209ENST00000525854 CYSTM1Q9H1C7 97 aa4.93□□□□□ -1.62
HIF3A-209ENST00000525854 SERP1Q9Y6X1 66 aa4.93□□□□□ -1.62
HIF3A-209ENST00000525854 KMT2DO14686 5537 aa4.91□□□□□ -1.62
HIF3A-209ENST00000525854 COA5Q86WW8 74 aa4.9□□□□□ -1.63
HIF3A-209ENST00000525854 P0C880 135 aa4.89□□□□□ -1.63
HIF3A-209ENST00000525854 M0QZ58 72 aa4.88□□□□□ -1.63
HIF3A-209ENST00000525854 SEC61GP60059 68 aa4.88□□□□□ -1.63
HIF3A-209ENST00000525854 MT1XP80297 61 aa4.88□□□□□ -1.63
HIF3A-209ENST00000525854 KRTAP20-1Q3LI63 56 aa4.88□□□□□ -1.63
HIF3A-209ENST00000525854 RPS28P62857 69 aaKnown RBP4.87□□□□□ -1.63
HIF3A-209ENST00000525854 V9GYY9 64 aa4.86□□□□□ -1.63
HIF3A-209ENST00000525854 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
HIF3A-209ENST00000525854 KRTAP3-2Q9BYR7 98 aa4.84□□□□□ -1.63
HIF3A-209ENST00000525854 SPRR2FQ96RM1 72 aa4.82□□□□□ -1.64
HIF3A-209ENST00000525854 PRR15LQ9BU68 103 aa4.82□□□□□ -1.64
HIF3A-209ENST00000525854 LINC01554Q52M75 96 aa4.81□□□□□ -1.64
HIF3A-209ENST00000525854 SMIM26A0A096LP01 95 aa4.8□□□□□ -1.64
HIF3A-209ENST00000525854 KRTAP12-2P59991 146 aa4.8□□□□□ -1.64
HIF3A-209ENST00000525854 KRTAP8-1Q8IUC2 63 aa4.79□□□□□ -1.64
HIF3A-209ENST00000525854 SPRR2EP22531 72 aa4.76□□□□□ -1.65
HIF3A-209ENST00000525854 SPRR2BP35325 72 aa4.76□□□□□ -1.65
HIF3A-209ENST00000525854 SPRR2AP35326 72 aa4.76□□□□□ -1.65
HIF3A-209ENST00000525854 KRTAP2-3P0C7H8 128 aa4.75□□□□□ -1.65
HIF3A-209ENST00000525854 KRTAP2-4Q9BYR9 128 aa4.75□□□□□ -1.65
HIF3A-209ENST00000525854 A0A1B0GU69 56 aa4.74□□□□□ -1.65
HIF3A-209ENST00000525854 Q1T7F1 81 aa4.7□□□□□ -1.66
HIF3A-209ENST00000525854 LINC01558Q9Y6Z2 57 aa4.7□□□□□ -1.66
HIF3A-209ENST00000525854 LCE1AQ5T7P2 110 aa4.68□□□□□ -1.66
HIF3A-209ENST00000525854 KRTAP4-8A0A0G2JLE6 195 aa4.67□□□□□ -1.66
HIF3A-209ENST00000525854 KRTAP4-8Q9BYQ9 185 aa4.67□□□□□ -1.66
HIF3A-209ENST00000525854 KRTAP10-7P60409 375 aaPredicted RBP4.65□□□□□ -1.67
HIF3A-209ENST00000525854 KRTAP10-12P60413 245 aa4.65□□□□□ -1.67
HIF3A-209ENST00000525854 A0A1B0GU33 70 aa4.6□□□□□ -1.67
HIF3A-209ENST00000525854 UQCR11O14957 56 aa4.6□□□□□ -1.67
HIF3A-209ENST00000525854 SPRR2DP22532 72 aa4.6□□□□□ -1.67
HIF3A-209ENST00000525854 KRTAP2-2Q9BYT5 123 aa4.59□□□□□ -1.67
HIF3A-209ENST00000525854 KRTAP2-1Q9BYU5 128 aa4.59□□□□□ -1.67
HIF3A-209ENST00000525854 PSPHP1O15172 72 aa4.57□□□□□ -1.68
HIF3A-209ENST00000525854 A6NED7 52 aa4.54□□□□□ -1.68
HIF3A-209ENST00000525854 CAMK2N1Q7Z7J9 78 aa4.54□□□□□ -1.68
HIF3A-209ENST00000525854 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
HIF3A-209ENST00000525854 K7ERS5 55 aa4.51□□□□□ -1.69
HIF3A-209ENST00000525854 MIR22HGQ0VDD5 57 aa4.49□□□□□ -1.69
HIF3A-209ENST00000525854 LCE3BQ5TA77 95 aa4.48□□□□□ -1.69
HIF3A-209ENST00000525854 A0A0D9SG42 100 aa4.42□□□□□ -1.7
HIF3A-209ENST00000525854 SPATA8Q6RVD6 105 aa4.41□□□□□ -1.7
HIF3A-209ENST00000525854 CDC42SE1Q9NRR8 79 aa4.41□□□□□ -1.7
HIF3A-209ENST00000525854 SPINT4Q6UDR6 99 aa4.37□□□□□ -1.71
HIF3A-209ENST00000525854 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
HIF3A-209ENST00000525854 BRK1Q8WUW1 75 aa4.36□□□□□ -1.71
HIF3A-209ENST00000525854 LCE5AQ5TCM9 118 aa4.34□□□□□ -1.71
HIF3A-209ENST00000525854 MT1EP04732 61 aa4.33□□□□□ -1.72
HIF3A-209ENST00000525854 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
HIF3A-209ENST00000525854 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
HIF3A-209ENST00000525854 A8MU10 97 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms