RNA–Protein interactions for RNA: ENST00000525435.1

CCS-202, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-202ENST00000525435 MT1FP04733 61 aa5.86□□□□□ -1.47
CCS-202ENST00000525435 SERP2Q8N6R1 65 aa5.85□□□□□ -1.47
CCS-202ENST00000525435 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
CCS-202ENST00000525435 NDUFC1O43677 76 aa5.82□□□□□ -1.48
CCS-202ENST00000525435 DMAC1Q96GE9 116 aa5.81□□□□□ -1.48
CCS-202ENST00000525435 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
CCS-202ENST00000525435 C20orf197Q8N268 126 aa5.76□□□□□ -1.49
CCS-202ENST00000525435 SNURFQ9Y675 71 aa5.75□□□□□ -1.49
CCS-202ENST00000525435 ACYP2P14621 99 aa5.74□□□□□ -1.49
CCS-202ENST00000525435 COX7CP15954 63 aa5.73□□□□□ -1.49
CCS-202ENST00000525435 SPANXA2-OT1Q8N9U9 137 aa5.73□□□□□ -1.49
CCS-202ENST00000525435 H0YAA0 97 aa5.72□□□□□ -1.49
CCS-202ENST00000525435 LCE2BO14633 110 aa5.69□□□□□ -1.5
CCS-202ENST00000525435 SPTSSBQ8NFR3 76 aa5.68□□□□□ -1.5
CCS-202ENST00000525435 CRIPTQ9P021 101 aa5.66□□□□□ -1.5
CCS-202ENST00000525435 ANAPC13Q9BS18 74 aa5.64□□□□□ -1.51
CCS-202ENST00000525435 KRTAP19-1Q8IUB9 90 aa5.61□□□□□ -1.51
CCS-202ENST00000525435 SPRR2GQ9BYE4 73 aa5.61□□□□□ -1.51
CCS-202ENST00000525435 ADM2Q7Z4H4 148 aa5.6□□□□□ -1.51
CCS-202ENST00000525435 CHKB-CPT1BH3BT56 60 aa5.59□□□□□ -1.51
CCS-202ENST00000525435 USH2AO75445 5202 aa5.59□□□□□ -1.51
CCS-202ENST00000525435 KRTAP9-7A8MTY7 169 aa5.58□□□□□ -1.52
CCS-202ENST00000525435 H7BZZ5 65 aa5.58□□□□□ -1.52
CCS-202ENST00000525435 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.56□□□□□ -1.52
CCS-202ENST00000525435 SSPOA2VEC9 5147 aa5.55□□□□□ -1.52
CCS-202ENST00000525435 KRTAP19-8Q3LI54 63 aa5.53□□□□□ -1.52
CCS-202ENST00000525435 CYSTM1Q9H1C7 97 aa5.53□□□□□ -1.52
CCS-202ENST00000525435 KRTAP3-2Q9BYR7 98 aa5.51□□□□□ -1.53
CCS-202ENST00000525435 Q5VV11 94 aa5.5□□□□□ -1.53
CCS-202ENST00000525435 COA5Q86WW8 74 aa5.5□□□□□ -1.53
CCS-202ENST00000525435 CCDC179H3BU77 68 aa5.49□□□□□ -1.53
CCS-202ENST00000525435 P0C880 135 aa5.49□□□□□ -1.53
CCS-202ENST00000525435 KRTAP19-6Q3LI70 58 aa5.49□□□□□ -1.53
CCS-202ENST00000525435 R4GN34 69 aa5.46□□□□□ -1.54
CCS-202ENST00000525435 FCGBPQ9Y6R7 5405 aaPredicted RBP5.45□□□□□ -1.54
CCS-202ENST00000525435 MT1BP07438 61 aa5.45□□□□□ -1.54
CCS-202ENST00000525435 ATP5EP56381 51 aaPredicted RBP5.43□□□□□ -1.54
CCS-202ENST00000525435 M0QZ58 72 aa5.4□□□□□ -1.54
CCS-202ENST00000525435 SEC61GP60059 68 aa5.4□□□□□ -1.54
CCS-202ENST00000525435 MACF1Q9UPN3 7388 aaKnown RBP5.35□□□□□ -1.55
CCS-202ENST00000525435 TMEM258P61165 79 aa5.35□□□□□ -1.55
CCS-202ENST00000525435 SERP1Q9Y6X1 66 aa5.34□□□□□ -1.55
CCS-202ENST00000525435 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
CCS-202ENST00000525435 A6NN06 94 aa5.32□□□□□ -1.56
CCS-202ENST00000525435 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
CCS-202ENST00000525435 LINC01554Q52M75 96 aa5.28□□□□□ -1.56
CCS-202ENST00000525435 SYNE2Q8WXH0 6885 aaKnown RBP5.27□□□□□ -1.57
CCS-202ENST00000525435 PRO2289Q9P1D8 64 aa5.26□□□□□ -1.57
CCS-202ENST00000525435 A0A1B0GU33 70 aa5.23□□□□□ -1.57
CCS-202ENST00000525435 A0A1B0GU69 56 aa5.23□□□□□ -1.57
CCS-202ENST00000525435 KRTAP13-4Q3LI77 160 aa5.2□□□□□ -1.58
CCS-202ENST00000525435 PRR15LQ9BU68 103 aa5.2□□□□□ -1.58
CCS-202ENST00000525435 MT1XP80297 61 aa5.18□□□□□ -1.58
CCS-202ENST00000525435 KRTAP6-3Q3LI67 103 aa5.18□□□□□ -1.58
CCS-202ENST00000525435 LINC01558Q9Y6Z2 57 aa5.17□□□□□ -1.58
CCS-202ENST00000525435 PCP4P48539 62 aa5.12□□□□□ -1.59
CCS-202ENST00000525435 SPATA8Q6RVD6 105 aa5.12□□□□□ -1.59
CCS-202ENST00000525435 SMIM26A0A096LP01 95 aa5.1□□□□□ -1.59
CCS-202ENST00000525435 A0A0D9SG42 100 aa5.08□□□□□ -1.6
CCS-202ENST00000525435 V9GYY9 64 aa5.08□□□□□ -1.6
CCS-202ENST00000525435 KRTAP12-2P59991 146 aa5.06□□□□□ -1.6
CCS-202ENST00000525435 CAMK2N1Q7Z7J9 78 aa5.05□□□□□ -1.6
CCS-202ENST00000525435 RPS28P62857 69 aaKnown RBP5.02□□□□□ -1.61
CCS-202ENST00000525435 UQCR11O14957 56 aa5.01□□□□□ -1.61
CCS-202ENST00000525435 KRTAP12-1P59990 96 aa5.01□□□□□ -1.61
CCS-202ENST00000525435 Q1T7F1 81 aa5.01□□□□□ -1.61
CCS-202ENST00000525435 SPINT4Q6UDR6 99 aa5□□□□□ -1.61
CCS-202ENST00000525435 MUC12Q9UKN1 5478 aa4.98□□□□□ -1.61
CCS-202ENST00000525435 NEBP20929 6669 aa4.98□□□□□ -1.61
CCS-202ENST00000525435 A8MU10 97 aa4.97□□□□□ -1.61
CCS-202ENST00000525435 KRTAP10-12P60413 245 aa4.95□□□□□ -1.62
CCS-202ENST00000525435 KRTAP5-9P26371 169 aa4.94□□□□□ -1.62
CCS-202ENST00000525435 KRTAP10-7P60409 375 aaPredicted RBP4.92□□□□□ -1.62
CCS-202ENST00000525435 PSPHP1O15172 72 aa4.9□□□□□ -1.63
CCS-202ENST00000525435 MIR22HGQ0VDD5 57 aa4.89□□□□□ -1.63
CCS-202ENST00000525435 KRTAP8-1Q8IUC2 63 aa4.89□□□□□ -1.63
CCS-202ENST00000525435 K7ERS5 55 aa4.87□□□□□ -1.63
CCS-202ENST00000525435 KRTAP20-1Q3LI63 56 aa4.87□□□□□ -1.63
CCS-202ENST00000525435 MDN1Q9NU22 5596 aa4.85□□□□□ -1.63
CCS-202ENST00000525435 KRTAP4-8A0A0G2JLE6 195 aa4.85□□□□□ -1.63
CCS-202ENST00000525435 KRTAP4-8Q9BYQ9 185 aa4.85□□□□□ -1.63
CCS-202ENST00000525435 KMT2DO14686 5537 aa4.84□□□□□ -1.63
CCS-202ENST00000525435 SPRR2FQ96RM1 72 aa4.8□□□□□ -1.64
CCS-202ENST00000525435 A6NED7 52 aa4.78□□□□□ -1.64
CCS-202ENST00000525435 C10orf95Q9H7T3 257 aa4.77□□□□□ -1.65
CCS-202ENST00000525435 TNP1P09430 55 aa4.75□□□□□ -1.65
CCS-202ENST00000525435 SVIPQ8NHG7 77 aa4.72□□□□□ -1.65
CCS-202ENST00000525435 KRTAP2-3P0C7H8 128 aa4.68□□□□□ -1.66
CCS-202ENST00000525435 KRTAP2-4Q9BYR9 128 aa4.68□□□□□ -1.66
CCS-202ENST00000525435 SPRR2EP22531 72 aa4.67□□□□□ -1.66
CCS-202ENST00000525435 SPRR2BP35325 72 aa4.67□□□□□ -1.66
CCS-202ENST00000525435 SPRR2AP35326 72 aa4.67□□□□□ -1.66
CCS-202ENST00000525435 LCE1AQ5T7P2 110 aa4.67□□□□□ -1.66
CCS-202ENST00000525435 KRTAP19-7Q3SYF9 63 aa4.63□□□□□ -1.67
CCS-202ENST00000525435 CDC42SE1Q9NRR8 79 aa4.63□□□□□ -1.67
CCS-202ENST00000525435 KRTAP25-1Q3LHN0 102 aa4.62□□□□□ -1.67
CCS-202ENST00000525435 MT1EP04732 61 aa4.58□□□□□ -1.68
CCS-202ENST00000525435 KRTAP19-5Q3LI72 72 aa4.57□□□□□ -1.68
CCS-202ENST00000525435 LCE3AQ5TA76 89 aa4.57□□□□□ -1.68
CCS-202ENST00000525435 KRTAP2-2Q9BYT5 123 aa4.53□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms