RNA–Protein interactions for RNA: ENST00000524379.1

LMO1-203, Transcript of LIM domain only 1, humanhuman

TSL 1 (best)

Gene LMO1, Length 785 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO1-203ENST00000524379 KRTAP3-3Q9BYR6 98 aa8.91□□□□□ -0.98
LMO1-203ENST00000524379 COX7CP15954 63 aa8.89□□□□□ -0.99
LMO1-203ENST00000524379 A8MUN3 132 aa8.87□□□□□ -0.99
LMO1-203ENST00000524379 MT1FP04733 61 aa8.85□□□□□ -0.99
LMO1-203ENST00000524379 DMAC1Q96GE9 116 aa8.85□□□□□ -0.99
LMO1-203ENST00000524379 CYSTM1Q9H1C7 97 aa8.81□□□□□ -1
LMO1-203ENST00000524379 ANAPC13Q9BS18 74 aa8.8□□□□□ -1
LMO1-203ENST00000524379 CSAG1Q6PB30 78 aa8.77□□□□□ -1.01
LMO1-203ENST00000524379 KRTAP10-10P60014 251 aa8.72□□□□□ -1.01
LMO1-203ENST00000524379 SPANXA2-OT1Q8N9U9 137 aa8.72□□□□□ -1.01
LMO1-203ENST00000524379 CCDC179H3BU77 68 aa8.71□□□□□ -1.02
LMO1-203ENST00000524379 USH2AO75445 5202 aa8.7□□□□□ -1.02
LMO1-203ENST00000524379 H7BZZ5 65 aa8.69□□□□□ -1.02
LMO1-203ENST00000524379 NDUFC1O43677 76 aa8.69□□□□□ -1.02
LMO1-203ENST00000524379 KRTAP9-3Q9BYQ3 159 aa8.69□□□□□ -1.02
LMO1-203ENST00000524379 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.66□□□□□ -1.02
LMO1-203ENST00000524379 ACYP2P14621 99 aa8.65□□□□□ -1.02
LMO1-203ENST00000524379 SSPOA2VEC9 5147 aa8.65□□□□□ -1.03
LMO1-203ENST00000524379 KRTAP9-7A8MTY7 169 aa8.63□□□□□ -1.03
LMO1-203ENST00000524379 LCE2BO14633 110 aa8.56□□□□□ -1.04
LMO1-203ENST00000524379 FCGBPQ9Y6R7 5405 aaPredicted RBP8.53□□□□□ -1.04
LMO1-203ENST00000524379 H0YAA0 97 aa8.53□□□□□ -1.04
LMO1-203ENST00000524379 KRTAP19-1Q8IUB9 90 aa8.5□□□□□ -1.05
LMO1-203ENST00000524379 COA5Q86WW8 74 aa8.49□□□□□ -1.05
LMO1-203ENST00000524379 CHKB-CPT1BH3BT56 60 aa8.48□□□□□ -1.05
LMO1-203ENST00000524379 ADM2Q7Z4H4 148 aa8.48□□□□□ -1.05
LMO1-203ENST00000524379 KRTAP3-2Q9BYR7 98 aa8.46□□□□□ -1.06
LMO1-203ENST00000524379 P0C880 135 aa8.41□□□□□ -1.06
LMO1-203ENST00000524379 SPTSSBQ8NFR3 76 aa8.4□□□□□ -1.06
LMO1-203ENST00000524379 SPRR2GQ9BYE4 73 aa8.39□□□□□ -1.07
LMO1-203ENST00000524379 CRIPTQ9P021 101 aa8.33□□□□□ -1.08
LMO1-203ENST00000524379 ATP5EP56381 51 aaPredicted RBP8.31□□□□□ -1.08
LMO1-203ENST00000524379 TMEM258P61165 79 aa8.31□□□□□ -1.08
LMO1-203ENST00000524379 KRTAP19-8Q3LI54 63 aa8.29□□□□□ -1.08
LMO1-203ENST00000524379 KRTAP19-6Q3LI70 58 aa8.28□□□□□ -1.08
LMO1-203ENST00000524379 MT1BP07438 61 aa8.26□□□□□ -1.09
LMO1-203ENST00000524379 MACF1Q9UPN3 7388 aaKnown RBP8.25□□□□□ -1.09
LMO1-203ENST00000524379 SYNE2Q8WXH0 6885 aaKnown RBP8.22□□□□□ -1.09
LMO1-203ENST00000524379 PCP4P48539 62 aa8.2□□□□□ -1.1
LMO1-203ENST00000524379 M0QZ58 72 aa8.16□□□□□ -1.1
LMO1-203ENST00000524379 Q5VV11 94 aa8.16□□□□□ -1.1
LMO1-203ENST00000524379 R4GN34 69 aa8.16□□□□□ -1.1
LMO1-203ENST00000524379 KRTAP13-4Q3LI77 160 aa8.09□□□□□ -1.11
LMO1-203ENST00000524379 SERP1Q9Y6X1 66 aa8.06□□□□□ -1.12
LMO1-203ENST00000524379 KRTAP6-3Q3LI67 103 aa8.04□□□□□ -1.12
LMO1-203ENST00000524379 SEC61GP60059 68 aa8.02□□□□□ -1.13
LMO1-203ENST00000524379 LINC01554Q52M75 96 aa8.01□□□□□ -1.13
LMO1-203ENST00000524379 A0A1B0GU69 56 aa7.98□□□□□ -1.13
LMO1-203ENST00000524379 LINC01558Q9Y6Z2 57 aa7.97□□□□□ -1.13
LMO1-203ENST00000524379 A0A1B0GU33 70 aa7.94□□□□□ -1.14
LMO1-203ENST00000524379 KRTAP10-5P60370 271 aa7.92□□□□□ -1.14
LMO1-203ENST00000524379 SPATA8Q6RVD6 105 aa7.9□□□□□ -1.14
LMO1-203ENST00000524379 PLAC4Q8WY50 150 aa7.88□□□□□ -1.15
LMO1-203ENST00000524379 A6NN06 94 aa7.86□□□□□ -1.15
LMO1-203ENST00000524379 MT1XP80297 61 aa7.85□□□□□ -1.15
LMO1-203ENST00000524379 PRR15LQ9BU68 103 aa7.82□□□□□ -1.16
LMO1-203ENST00000524379 A0A0D9SG42 100 aa7.79□□□□□ -1.16
LMO1-203ENST00000524379 RPS28P62857 69 aaKnown RBP7.77□□□□□ -1.17
LMO1-203ENST00000524379 Q1T7F1 81 aa7.76□□□□□ -1.17
LMO1-203ENST00000524379 SMIM26A0A096LP01 95 aa7.75□□□□□ -1.17
LMO1-203ENST00000524379 NEBP20929 6669 aa7.74□□□□□ -1.17
LMO1-203ENST00000524379 A8MU10 97 aa7.74□□□□□ -1.17
LMO1-203ENST00000524379 KRTAP12-1P59990 96 aa7.7□□□□□ -1.18
LMO1-203ENST00000524379 V9GYY9 64 aa7.69□□□□□ -1.18
LMO1-203ENST00000524379 PSPHP1O15172 72 aa7.68□□□□□ -1.18
LMO1-203ENST00000524379 PRO2289Q9P1D8 64 aa7.67□□□□□ -1.18
LMO1-203ENST00000524379 MUC12Q9UKN1 5478 aa7.67□□□□□ -1.18
LMO1-203ENST00000524379 KRTAP12-2P59991 146 aa7.66□□□□□ -1.18
LMO1-203ENST00000524379 SPINT4Q6UDR6 99 aa7.62□□□□□ -1.19
LMO1-203ENST00000524379 UQCR11O14957 56 aa7.61□□□□□ -1.19
LMO1-203ENST00000524379 KRTAP20-1Q3LI63 56 aa7.56□□□□□ -1.2
LMO1-203ENST00000524379 CAMK2N1Q7Z7J9 78 aa7.56□□□□□ -1.2
LMO1-203ENST00000524379 KRTAP5-9P26371 169 aa7.55□□□□□ -1.2
LMO1-203ENST00000524379 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.21
LMO1-203ENST00000524379 KRTAP10-7P60409 375 aaPredicted RBP7.51□□□□□ -1.21
LMO1-203ENST00000524379 KMT2DO14686 5537 aa7.5□□□□□ -1.21
LMO1-203ENST00000524379 MDN1Q9NU22 5596 aa7.48□□□□□ -1.21
LMO1-203ENST00000524379 KRTAP10-12P60413 245 aa7.43□□□□□ -1.22
LMO1-203ENST00000524379 A6NED7 52 aa7.39□□□□□ -1.23
LMO1-203ENST00000524379 KRTAP4-8A0A0G2JLE6 195 aa7.38□□□□□ -1.23
LMO1-203ENST00000524379 KRTAP4-8Q9BYQ9 185 aa7.38□□□□□ -1.23
LMO1-203ENST00000524379 C10orf95Q9H7T3 257 aa7.34□□□□□ -1.23
LMO1-203ENST00000524379 KRTAP2-3P0C7H8 128 aa7.32□□□□□ -1.24
LMO1-203ENST00000524379 KRTAP2-4Q9BYR9 128 aa7.32□□□□□ -1.24
LMO1-203ENST00000524379 SPRR2FQ96RM1 72 aa7.29□□□□□ -1.24
LMO1-203ENST00000524379 SPRR2EP22531 72 aa7.24□□□□□ -1.25
LMO1-203ENST00000524379 SPRR2BP35325 72 aa7.24□□□□□ -1.25
LMO1-203ENST00000524379 SPRR2AP35326 72 aa7.24□□□□□ -1.25
LMO1-203ENST00000524379 KRTAP8-1Q8IUC2 63 aa7.24□□□□□ -1.25
LMO1-203ENST00000524379 CDC42SE1Q9NRR8 79 aa7.2□□□□□ -1.26
LMO1-203ENST00000524379 K7ERS5 55 aa7.16□□□□□ -1.26
LMO1-203ENST00000524379 LCE1AQ5T7P2 110 aa7.11□□□□□ -1.27
LMO1-203ENST00000524379 TNP1P09430 55 aa7.1□□□□□ -1.27
LMO1-203ENST00000524379 KRTAP2-2Q9BYT5 123 aa7.07□□□□□ -1.28
LMO1-203ENST00000524379 KRTAP2-1Q9BYU5 128 aa7.07□□□□□ -1.28
LMO1-203ENST00000524379 KRTAP19-7Q3SYF9 63 aa7.03□□□□□ -1.28
LMO1-203ENST00000524379 LCE3AQ5TA76 89 aa7.02□□□□□ -1.29
LMO1-203ENST00000524379 SPRR2DP22532 72 aa7□□□□□ -1.29
LMO1-203ENST00000524379 KRTAP25-1Q3LHN0 102 aa6.95□□□□□ -1.3
LMO1-203ENST00000524379 KRTAP19-5Q3LI72 72 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms