RNA–Protein interactions for RNA: ENST00000522348.1

SPARC-205, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 3

Gene SPARC, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-205ENST00000522348 PSPHP1O15172 72 aa4.91□□□□□ -1.62
SPARC-205ENST00000522348 PRR15LQ9BU68 103 aa4.91□□□□□ -1.62
SPARC-205ENST00000522348 LPAP08519 4548 aa4.91□□□□□ -1.62
SPARC-205ENST00000522348 LRP2P98164 4655 aa4.9□□□□□ -1.62
SPARC-205ENST00000522348 HMCN2Q8NDA2 5059 aa4.9□□□□□ -1.63
SPARC-205ENST00000522348 A0A1B0GU69 56 aa4.87□□□□□ -1.63
SPARC-205ENST00000522348 SEC61GP60059 68 aa4.87□□□□□ -1.63
SPARC-205ENST00000522348 Q5VV11 94 aa4.87□□□□□ -1.63
SPARC-205ENST00000522348 S4R3F8 94 aa4.86□□□□□ -1.63
SPARC-205ENST00000522348 MUC17Q685J3 4493 aa4.85□□□□□ -1.63
SPARC-205ENST00000522348 LCA10Q71F78 164 aa4.84□□□□□ -1.63
SPARC-205ENST00000522348 KRTAP4-1Q9BYQ7 146 aa4.83□□□□□ -1.64
SPARC-205ENST00000522348 A6NED7 52 aa4.79□□□□□ -1.64
SPARC-205ENST00000522348 CSAG1Q6PB30 78 aa4.79□□□□□ -1.64
SPARC-205ENST00000522348 UBR4Q5T4S7 5183 aa4.78□□□□□ -1.64
SPARC-205ENST00000522348 BRK1Q8WUW1 75 aa4.76□□□□□ -1.65
SPARC-205ENST00000522348 UQCR11O14957 56 aa4.75□□□□□ -1.65
SPARC-205ENST00000522348 KRTAP19-2Q3LHN2 52 aa4.73□□□□□ -1.65
SPARC-205ENST00000522348 CDC42SE1Q9NRR8 79 aa4.72□□□□□ -1.65
SPARC-205ENST00000522348 PRO0628Q9UI54 55 aa4.72□□□□□ -1.65
SPARC-205ENST00000522348 A0A1B0GU33 70 aa4.71□□□□□ -1.66
SPARC-205ENST00000522348 SPATA8Q6RVD6 105 aa4.7□□□□□ -1.66
SPARC-205ENST00000522348 MIR22HGQ0VDD5 57 aa4.69□□□□□ -1.66
SPARC-205ENST00000522348 H0YAA0 97 aa4.68□□□□□ -1.66
SPARC-205ENST00000522348 KRTAP10-6P60371 365 aaPredicted RBP4.67□□□□□ -1.66
SPARC-205ENST00000522348 ADM2Q7Z4H4 148 aa4.66□□□□□ -1.66
SPARC-205ENST00000522348 RNF213Q63HN8 5207 aa4.65□□□□□ -1.66
SPARC-205ENST00000522348 A8MU10 97 aa4.61□□□□□ -1.67
SPARC-205ENST00000522348 P0C880 135 aa4.61□□□□□ -1.67
SPARC-205ENST00000522348 MUC2Q02817 5179 aa4.6□□□□□ -1.67
SPARC-205ENST00000522348 LCE2CQ5TA81 110 aa4.6□□□□□ -1.67
SPARC-205ENST00000522348 M0QZ58 72 aa4.58□□□□□ -1.68
SPARC-205ENST00000522348 FLGP20930 4061 aaPredicted RBP4.55□□□□□ -1.68
SPARC-205ENST00000522348 PMAIP1Q13794 54 aa4.54□□□□□ -1.68
SPARC-205ENST00000522348 M0R2T5 61 aa4.53□□□□□ -1.68
SPARC-205ENST00000522348 KRTAP13-4Q3LI77 160 aa4.52□□□□□ -1.69
SPARC-205ENST00000522348 K7ERS5 55 aa4.51□□□□□ -1.69
SPARC-205ENST00000522348 LCE2AQ5TA79 106 aaPredicted RBP4.51□□□□□ -1.69
SPARC-205ENST00000522348 MT1HP80294 61 aa4.5□□□□□ -1.69
SPARC-205ENST00000522348 R4GN34 69 aa4.5□□□□□ -1.69
SPARC-205ENST00000522348 CRIPTQ9P021 101 aa4.49□□□□□ -1.69
SPARC-205ENST00000522348 A0A0D9SG42 100 aa4.47□□□□□ -1.69
SPARC-205ENST00000522348 A6NN06 94 aa4.47□□□□□ -1.69
SPARC-205ENST00000522348 LORP23490 312 aaPredicted RBP4.44□□□□□ -1.7
SPARC-205ENST00000522348 FAT4Q6V0I7 4981 aa4.42□□□□□ -1.7
SPARC-205ENST00000522348 LINC01554Q52M75 96 aa4.39□□□□□ -1.71
SPARC-205ENST00000522348 SPINT4Q6UDR6 99 aa4.39□□□□□ -1.71
SPARC-205ENST00000522348 KRTAP12-1P59990 96 aa4.38□□□□□ -1.71
SPARC-205ENST00000522348 KRTAP12-2P59991 146 aa4.36□□□□□ -1.71
SPARC-205ENST00000522348 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
SPARC-205ENST00000522348 MT2AP02795 61 aa4.34□□□□□ -1.71
SPARC-205ENST00000522348 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
SPARC-205ENST00000522348 KTN1-AS1Q86SY8 53 aa4.34□□□□□ -1.71
SPARC-205ENST00000522348 KRTAP9-2Q9BYQ4 174 aa4.33□□□□□ -1.72
SPARC-205ENST00000522348 SPRR2GQ9BYE4 73 aa4.32□□□□□ -1.72
SPARC-205ENST00000522348 MT1FP04733 61 aa4.3□□□□□ -1.72
SPARC-205ENST00000522348 ROMO1P60602 79 aa4.3□□□□□ -1.72
SPARC-205ENST00000522348 KRTAP19-1Q8IUB9 90 aa4.27□□□□□ -1.73
SPARC-205ENST00000522348 PLAC4Q8WY50 150 aa4.24□□□□□ -1.73
SPARC-205ENST00000522348 CAMK2N1Q7Z7J9 78 aa4.23□□□□□ -1.73
SPARC-205ENST00000522348 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
SPARC-205ENST00000522348 KRTAP19-8Q3LI54 63 aa4.19□□□□□ -1.74
SPARC-205ENST00000522348 PRAC1Q96KF2 57 aa4.18□□□□□ -1.74
SPARC-205ENST00000522348 KRTAP9-6A0A140TA67 174 aa4.15□□□□□ -1.75
SPARC-205ENST00000522348 LCE2BO14633 110 aa4.15□□□□□ -1.75
SPARC-205ENST00000522348 C10orf95Q9H7T3 257 aa4.15□□□□□ -1.75
SPARC-205ENST00000522348 CRCT1Q9UGL9 99 aa4.13□□□□□ -1.75
SPARC-205ENST00000522348 KRTAP25-1Q3LHN0 102 aa4.12□□□□□ -1.75
SPARC-205ENST00000522348 MT1BP07438 61 aa4.1□□□□□ -1.75
SPARC-205ENST00000522348 H3BS24 57 aa4.08□□□□□ -1.76
SPARC-205ENST00000522348 TNP1P09430 55 aa4.05□□□□□ -1.76
SPARC-205ENST00000522348 FSIP2Q5CZC0 6907 aa4.03□□□□□ -1.76
SPARC-205ENST00000522348 PRO2289Q9P1D8 64 aa4□□□□□ -1.77
SPARC-205ENST00000522348 PP632Q6XCG6 107 aa3.99□□□□□ -1.77
SPARC-205ENST00000522348 KRTAP23-1A1A580 65 aa3.98□□□□□ -1.77
SPARC-205ENST00000522348 KRTAP10-5P60370 271 aa3.98□□□□□ -1.77
SPARC-205ENST00000522348 MT1XP80297 61 aa3.98□□□□□ -1.77
SPARC-205ENST00000522348 KRTAP19-6Q3LI70 58 aa3.88□□□□□ -1.79
SPARC-205ENST00000522348 USH2AO75445 5202 aa3.88□□□□□ -1.79
SPARC-205ENST00000522348 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
SPARC-205ENST00000522348 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.81□□□□□ -1.8
SPARC-205ENST00000522348 KRTAP10-12P60413 245 aa3.81□□□□□ -1.8
SPARC-205ENST00000522348 LCE3AQ5TA76 89 aa3.81□□□□□ -1.8
SPARC-205ENST00000522348 SSPOA2VEC9 5147 aa3.8□□□□□ -1.8
SPARC-205ENST00000522348 KRTAP8-1Q8IUC2 63 aa3.77□□□□□ -1.81
SPARC-205ENST00000522348 KRTAP9-7A8MTY7 169 aa3.75□□□□□ -1.81
SPARC-205ENST00000522348 FCGBPQ9Y6R7 5405 aaPredicted RBP3.75□□□□□ -1.81
SPARC-205ENST00000522348 KRTAP12-3P60328 96 aa3.68□□□□□ -1.82
SPARC-205ENST00000522348 MACF1Q9UPN3 7388 aaKnown RBP3.68□□□□□ -1.82
SPARC-205ENST00000522348 KRTAP4-8A0A0G2JLE6 195 aa3.65□□□□□ -1.83
SPARC-205ENST00000522348 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
SPARC-205ENST00000522348 KRTAP4-8Q9BYQ9 185 aa3.65□□□□□ -1.83
SPARC-205ENST00000522348 KRTAP19-5Q3LI72 72 aa3.63□□□□□ -1.83
SPARC-205ENST00000522348 KRTAP6-3Q3LI67 103 aa3.62□□□□□ -1.83
SPARC-205ENST00000522348 SYNE2Q8WXH0 6885 aaKnown RBP3.59□□□□□ -1.83
SPARC-205ENST00000522348 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
SPARC-205ENST00000522348 KRTAP19-7Q3SYF9 63 aa3.55□□□□□ -1.84
SPARC-205ENST00000522348 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
SPARC-205ENST00000522348 MT1EP04732 61 aa3.49□□□□□ -1.85
SPARC-205ENST00000522348 SPRR2FQ96RM1 72 aa3.48□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms