RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 MT1HP80294 61 aa6.58□□□□□ -1.36
CLK4-210ENST00000522136 A8MUN3 132 aa6.57□□□□□ -1.36
CLK4-210ENST00000522136 FLGP20930 4061 aaPredicted RBP6.53□□□□□ -1.36
CLK4-210ENST00000522136 ACYP2P14621 99 aa6.53□□□□□ -1.36
CLK4-210ENST00000522136 S4R3F8 94 aa6.53□□□□□ -1.36
CLK4-210ENST00000522136 LCA10Q71F78 164 aa6.52□□□□□ -1.37
CLK4-210ENST00000522136 M0R2T5 61 aa6.49□□□□□ -1.37
CLK4-210ENST00000522136 TMEM258P61165 79 aa6.48□□□□□ -1.37
CLK4-210ENST00000522136 COA5Q86WW8 74 aa6.44□□□□□ -1.38
CLK4-210ENST00000522136 ATP5EP56381 51 aaPredicted RBP6.43□□□□□ -1.38
CLK4-210ENST00000522136 CHKB-CPT1BH3BT56 60 aa6.42□□□□□ -1.38
CLK4-210ENST00000522136 CSAG1Q6PB30 78 aa6.4□□□□□ -1.38
CLK4-210ENST00000522136 KRTAP10-6P60371 365 aaPredicted RBP6.37□□□□□ -1.39
CLK4-210ENST00000522136 LOC100996750A0A140TA64 210 aa6.34□□□□□ -1.39
CLK4-210ENST00000522136 KRTAP4-6Q9BYQ5 205 aa6.34□□□□□ -1.39
CLK4-210ENST00000522136 SPTSSBQ8NFR3 76 aa6.31□□□□□ -1.4
CLK4-210ENST00000522136 KRTAP9-8Q9BYQ0 159 aa6.31□□□□□ -1.4
CLK4-210ENST00000522136 SERP1Q9Y6X1 66 aa6.29□□□□□ -1.4
CLK4-210ENST00000522136 MT2AP02795 61 aa6.27□□□□□ -1.41
CLK4-210ENST00000522136 MT1FP04733 61 aa6.23□□□□□ -1.41
CLK4-210ENST00000522136 ADM2Q7Z4H4 148 aa6.23□□□□□ -1.41
CLK4-210ENST00000522136 H0YAA0 97 aa6.21□□□□□ -1.42
CLK4-210ENST00000522136 KRTAP10-10P60014 251 aa6.2□□□□□ -1.42
CLK4-210ENST00000522136 P0C880 135 aa6.18□□□□□ -1.42
CLK4-210ENST00000522136 RPS28P62857 69 aaKnown RBP6.15□□□□□ -1.42
CLK4-210ENST00000522136 SEC61GP60059 68 aa6.09□□□□□ -1.43
CLK4-210ENST00000522136 LINC01558Q9Y6Z2 57 aa6.09□□□□□ -1.43
CLK4-210ENST00000522136 SMIM26A0A096LP01 95 aa6.09□□□□□ -1.43
CLK4-210ENST00000522136 KRTAP9-3Q9BYQ3 159 aa6.09□□□□□ -1.43
CLK4-210ENST00000522136 A0A1B0GU69 56 aa6.08□□□□□ -1.44
CLK4-210ENST00000522136 KRTAP19-1Q8IUB9 90 aa6.03□□□□□ -1.44
CLK4-210ENST00000522136 Q1T7F1 81 aa6.02□□□□□ -1.45
CLK4-210ENST00000522136 CRIPTQ9P021 101 aa6.02□□□□□ -1.45
CLK4-210ENST00000522136 PRR15LQ9BU68 103 aa6.01□□□□□ -1.45
CLK4-210ENST00000522136 R4GN34 69 aa6□□□□□ -1.45
CLK4-210ENST00000522136 M0QZ58 72 aa6□□□□□ -1.45
CLK4-210ENST00000522136 V9GYY9 64 aa6□□□□□ -1.45
CLK4-210ENST00000522136 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
CLK4-210ENST00000522136 PSPHP1O15172 72 aa5.98□□□□□ -1.45
CLK4-210ENST00000522136 A0A1B0GU33 70 aa5.98□□□□□ -1.45
CLK4-210ENST00000522136 KRTAP13-4Q3LI77 160 aa5.98□□□□□ -1.45
CLK4-210ENST00000522136 SPATA8Q6RVD6 105 aa5.93□□□□□ -1.46
CLK4-210ENST00000522136 LINC01554Q52M75 96 aa5.92□□□□□ -1.46
CLK4-210ENST00000522136 Q5VV11 94 aa5.91□□□□□ -1.46
CLK4-210ENST00000522136 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
CLK4-210ENST00000522136 H3BS24 57 aa5.91□□□□□ -1.46
CLK4-210ENST00000522136 KRTAP9-2Q9BYQ4 174 aa5.89□□□□□ -1.47
CLK4-210ENST00000522136 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
CLK4-210ENST00000522136 A0A0D9SG42 100 aa5.84□□□□□ -1.47
CLK4-210ENST00000522136 UQCR11O14957 56 aa5.84□□□□□ -1.47
CLK4-210ENST00000522136 MT1BP07438 61 aa5.84□□□□□ -1.47
CLK4-210ENST00000522136 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.84□□□□□ -1.48
CLK4-210ENST00000522136 A8MU10 97 aa5.82□□□□□ -1.48
CLK4-210ENST00000522136 USH2AO75445 5202 aa5.82□□□□□ -1.48
CLK4-210ENST00000522136 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
CLK4-210ENST00000522136 A6NED7 52 aa5.77□□□□□ -1.49
CLK4-210ENST00000522136 MIR22HGQ0VDD5 57 aa5.77□□□□□ -1.49
CLK4-210ENST00000522136 FSIP2Q5CZC0 6907 aa5.75□□□□□ -1.49
CLK4-210ENST00000522136 KRTAP4-12Q9BQ66 201 aa5.74□□□□□ -1.49
CLK4-210ENST00000522136 PLAC4Q8WY50 150 aa5.73□□□□□ -1.49
CLK4-210ENST00000522136 A6NN06 94 aa5.73□□□□□ -1.49
CLK4-210ENST00000522136 KRTAP12-1P59990 96 aa5.71□□□□□ -1.49
CLK4-210ENST00000522136 SPINT4Q6UDR6 99 aa5.71□□□□□ -1.49
CLK4-210ENST00000522136 KRTAP12-2P59991 146 aa5.69□□□□□ -1.5
CLK4-210ENST00000522136 SSPOA2VEC9 5147 aa5.68□□□□□ -1.5
CLK4-210ENST00000522136 LCE3BQ5TA77 95 aa5.67□□□□□ -1.5
CLK4-210ENST00000522136 CRCT1Q9UGL9 99 aa5.64□□□□□ -1.51
CLK4-210ENST00000522136 KRTAP19-6Q3LI70 58 aa5.63□□□□□ -1.51
CLK4-210ENST00000522136 CDC42SE1Q9NRR8 79 aa5.62□□□□□ -1.51
CLK4-210ENST00000522136 MT1XP80297 61 aa5.6□□□□□ -1.51
CLK4-210ENST00000522136 CAMK2N1Q7Z7J9 78 aa5.6□□□□□ -1.51
CLK4-210ENST00000522136 KRTAP10-5P60370 271 aa5.58□□□□□ -1.52
CLK4-210ENST00000522136 KRTAP9-9Q9BYP9 154 aa5.56□□□□□ -1.52
CLK4-210ENST00000522136 KRTAP9-4Q9BYQ2 154 aa5.56□□□□□ -1.52
CLK4-210ENST00000522136 BRK1Q8WUW1 75 aa5.53□□□□□ -1.52
CLK4-210ENST00000522136 K7ERS5 55 aa5.51□□□□□ -1.53
CLK4-210ENST00000522136 PRO2289Q9P1D8 64 aa5.51□□□□□ -1.53
CLK4-210ENST00000522136 FCGBPQ9Y6R7 5405 aaPredicted RBP5.49□□□□□ -1.53
CLK4-210ENST00000522136 LCE4AQ5TA78 99 aa5.44□□□□□ -1.54
CLK4-210ENST00000522136 C10orf95Q9H7T3 257 aa5.44□□□□□ -1.54
CLK4-210ENST00000522136 KRTAP4-8A0A0G2JLE6 195 aa5.38□□□□□ -1.55
CLK4-210ENST00000522136 KRTAP10-7P60409 375 aaPredicted RBP5.38□□□□□ -1.55
CLK4-210ENST00000522136 KRTAP9-7A8MTY7 169 aa5.31□□□□□ -1.56
CLK4-210ENST00000522136 KRTAP10-12P60413 245 aa5.29□□□□□ -1.56
CLK4-210ENST00000522136 KRTAP19-4Q3LI73 84 aa5.29□□□□□ -1.56
CLK4-210ENST00000522136 TNP1P09430 55 aa5.27□□□□□ -1.57
CLK4-210ENST00000522136 ROMO1P60602 79 aa5.27□□□□□ -1.57
CLK4-210ENST00000522136 LCE1DQ5T752 114 aa5.27□□□□□ -1.57
CLK4-210ENST00000522136 PRO0628Q9UI54 55 aa5.25□□□□□ -1.57
CLK4-210ENST00000522136 PMAIP1Q13794 54 aa5.22□□□□□ -1.57
CLK4-210ENST00000522136 MACF1Q9UPN3 7388 aaKnown RBP5.21□□□□□ -1.57
CLK4-210ENST00000522136 KMT2DO14686 5537 aa5.21□□□□□ -1.58
CLK4-210ENST00000522136 KRTAP25-1Q3LHN0 102 aa5.2□□□□□ -1.58
CLK4-210ENST00000522136 KRTAP4-7Q9BYR0 210 aa5.18□□□□□ -1.58
CLK4-210ENST00000522136 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
CLK4-210ENST00000522136 KRTAP8-1Q8IUC2 63 aa5.12□□□□□ -1.59
CLK4-210ENST00000522136 KRTAP4-9Q9BYQ8 210 aa5.1□□□□□ -1.59
CLK4-210ENST00000522136 SYNE2Q8WXH0 6885 aaKnown RBP5.09□□□□□ -1.59
CLK4-210ENST00000522136 KRTAP6-3Q3LI67 103 aa5.02□□□□□ -1.61
CLK4-210ENST00000522136 KRTAP19-5Q3LI72 72 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms