RNA–Protein interactions for RNA: ENST00000521600.5

PVT1-211, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 408 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-211ENST00000521600 C1orf64Q8NEQ6 169 aa2.3□□□□□ -2.04
PVT1-211ENST00000521600 MRPL34Q9BQ48 92 aaKnown RBP2.3□□□□□ -2.04
PVT1-211ENST00000521600 LIMD2Q9BT23 127 aa2.3□□□□□ -2.04
PVT1-211ENST00000521600 NDUFS5O43920 106 aa2.29□□□□□ -2.04
PVT1-211ENST00000521600 Q5XG85 94 aa2.29□□□□□ -2.04
PVT1-211ENST00000521600 KRTAP5-3Q6L8H2 238 aa2.29□□□□□ -2.04
PVT1-211ENST00000521600 ANAPC11Q9NYG5 84 aa2.29□□□□□ -2.04
PVT1-211ENST00000521600 V9GYY9 64 aa2.28□□□□□ -2.04
PVT1-211ENST00000521600 LOC101927531A0A1B0GV80 90 aa2.27□□□□□ -2.05
PVT1-211ENST00000521600 LINC00313P59037 77 aa2.27□□□□□ -2.05
PVT1-211ENST00000521600 C4orf26Q17RF5 130 aa2.27□□□□□ -2.05
PVT1-211ENST00000521600 SPINK6Q6UWN8 80 aa2.27□□□□□ -2.05
PVT1-211ENST00000521600 SPINK1P00995 79 aa2.26□□□□□ -2.05
PVT1-211ENST00000521600 KRTAP10-8P60410 259 aa2.26□□□□□ -2.05
PVT1-211ENST00000521600 RPS29P62273 56 aaKnown RBP2.26□□□□□ -2.05
PVT1-211ENST00000521600 Q1T7F1 81 aa2.26□□□□□ -2.05
PVT1-211ENST00000521600 C1orf195Q5TG92 126 aa2.26□□□□□ -2.05
PVT1-211ENST00000521600 FP248Q71RG6 208 aaPredicted RBP2.26□□□□□ -2.05
PVT1-211ENST00000521600 KRTAP13-2Q52LG2 175 aa2.25□□□□□ -2.05
PVT1-211ENST00000521600 SPAG11AQ6PDA7 123 aa2.25□□□□□ -2.05
PVT1-211ENST00000521600 TYMSOSQ8TAI1 123 aa2.25□□□□□ -2.05
PVT1-211ENST00000521600 KRTAP1-4P0C5Y4 121 aa2.24□□□□□ -2.05
PVT1-211ENST00000521600 PRR4Q16378 134 aa2.24□□□□□ -2.05
PVT1-211ENST00000521600 PCOTHQ58A44 107 aa2.23□□□□□ -2.05
PVT1-211ENST00000521600 KRTAP13-3Q3SY46 172 aa2.22□□□□□ -2.05
PVT1-211ENST00000521600 COA5Q86WW8 74 aa2.22□□□□□ -2.05
PVT1-211ENST00000521600 LINC00304Q8N9R0 145 aa2.22□□□□□ -2.05
PVT1-211ENST00000521600 PRO0628Q9UI54 55 aa2.22□□□□□ -2.05
PVT1-211ENST00000521600 ACYP2P14621 99 aa2.21□□□□□ -2.06
PVT1-211ENST00000521600 LCE1FQ5T754 118 aa2.2□□□□□ -2.06
PVT1-211ENST00000521600 Q5W150 140 aa2.2□□□□□ -2.06
PVT1-211ENST00000521600 BRK1Q8WUW1 75 aa2.2□□□□□ -2.06
PVT1-211ENST00000521600 SSPOA2VEC9 5147 aa2.19□□□□□ -2.06
PVT1-211ENST00000521600 CHKB-CPT1BH3BT56 60 aa2.18□□□□□ -2.06
PVT1-211ENST00000521600 PSPHP1O15172 72 aa2.18□□□□□ -2.06
PVT1-211ENST00000521600 HRES1P13985 223 aa2.18□□□□□ -2.06
PVT1-211ENST00000521600 DMAC1Q96GE9 116 aa2.18□□□□□ -2.06
PVT1-211ENST00000521600 LINC01558Q9Y6Z2 57 aa2.18□□□□□ -2.06
PVT1-211ENST00000521600 USH2AO75445 5202 aa2.17□□□□□ -2.06
PVT1-211ENST00000521600 A8MUN3 132 aa2.17□□□□□ -2.06
PVT1-211ENST00000521600 C7orf65Q6ZTY9 151 aa2.17□□□□□ -2.06
PVT1-211ENST00000521600 RETNLBQ9BQ08 111 aa2.17□□□□□ -2.06
PVT1-211ENST00000521600 PRR15LQ9BU68 103 aa2.17□□□□□ -2.06
PVT1-211ENST00000521600 FCGBPQ9Y6R7 5405 aaPredicted RBP2.16□□□□□ -2.06
PVT1-211ENST00000521600 Q5VV11 94 aa2.16□□□□□ -2.06
PVT1-211ENST00000521600 SPTSSBQ8NFR3 76 aa2.15□□□□□ -2.07
PVT1-211ENST00000521600 C20orf166-AS1Q96NR2 134 aa2.15□□□□□ -2.07
PVT1-211ENST00000521600 SYNE2Q8WXH0 6885 aaKnown RBP2.15□□□□□ -2.07
PVT1-211ENST00000521600 A6NED7 52 aa2.14□□□□□ -2.07
PVT1-211ENST00000521600 A8MUU9 505 aa2.14□□□□□ -2.07
PVT1-211ENST00000521600 FLGP20930 4061 aaPredicted RBP2.13□□□□□ -2.07
PVT1-211ENST00000521600 KRTAP4-1Q9BYQ7 146 aa2.13□□□□□ -2.07
PVT1-211ENST00000521600 CDC42SE1Q9NRR8 79 aa2.13□□□□□ -2.07
PVT1-211ENST00000521600 MACF1Q9UPN3 7388 aaKnown RBP2.13□□□□□ -2.07
PVT1-211ENST00000521600 A0A1B0GU69 56 aa2.12□□□□□ -2.07
PVT1-211ENST00000521600 C9orf92A6NGG3 77 aa2.12□□□□□ -2.07
PVT1-211ENST00000521600 KRTAP10-12P60413 245 aa2.11□□□□□ -2.07
PVT1-211ENST00000521600 ATP11AUNQ6ZP68 121 aa2.11□□□□□ -2.07
PVT1-211ENST00000521600 SEC61GP60059 68 aa2.1□□□□□ -2.07
PVT1-211ENST00000521600 KRTAP10-6P60371 365 aaPredicted RBP2.1□□□□□ -2.07
PVT1-211ENST00000521600 SPINK7P58062 85 aa2.09□□□□□ -2.07
PVT1-211ENST00000521600 MT1HP80294 61 aa2.09□□□□□ -2.07
PVT1-211ENST00000521600 KRTAP19-2Q3LHN2 52 aa2.09□□□□□ -2.07
PVT1-211ENST00000521600 UQCR11O14957 56 aa2.08□□□□□ -2.08
PVT1-211ENST00000521600 PMAIP1Q13794 54 aa2.08□□□□□ -2.08
PVT1-211ENST00000521600 LCA10Q71F78 164 aa2.08□□□□□ -2.08
PVT1-211ENST00000521600 RPL37P61927 97 aaKnown RBP2.07□□□□□ -2.08
PVT1-211ENST00000521600 TPRXLQ17RH7 258 aa2.07□□□□□ -2.08
PVT1-211ENST00000521600 MIR22HGQ0VDD5 57 aa2.06□□□□□ -2.08
PVT1-211ENST00000521600 LCE3CQ5T5A8 94 aa2.06□□□□□ -2.08
PVT1-211ENST00000521600 COX6B2Q6YFQ2 88 aa2.06□□□□□ -2.08
PVT1-211ENST00000521600 SPATA8Q6RVD6 105 aa2.05□□□□□ -2.08
PVT1-211ENST00000521600 A6NN06 94 aa2.04□□□□□ -2.08
PVT1-211ENST00000521600 A8MU10 97 aa2.04□□□□□ -2.08
PVT1-211ENST00000521600 NEBP20929 6669 aa2.04□□□□□ -2.08
PVT1-211ENST00000521600 KTN1-AS1Q86SY8 53 aa2.04□□□□□ -2.08
PVT1-211ENST00000521600 MUC12Q9UKN1 5478 aa2.04□□□□□ -2.08
PVT1-211ENST00000521600 A0A1B0GU33 70 aa2.01□□□□□ -2.09
PVT1-211ENST00000521600 M0R2T5 61 aa2.01□□□□□ -2.09
PVT1-211ENST00000521600 S4R3F8 94 aa2.01□□□□□ -2.09
PVT1-211ENST00000521600 KRTAP10-5P60370 271 aa2□□□□□ -2.09
PVT1-211ENST00000521600 KRTAP10-7P60409 375 aaPredicted RBP2□□□□□ -2.09
PVT1-211ENST00000521600 H1FX-AS1Q4G0G2 97 aa2□□□□□ -2.09
PVT1-211ENST00000521600 RBM12B-AS1Q9P1G2 102 aa2□□□□□ -2.09
PVT1-211ENST00000521600 K7ERS5 55 aa1.99□□□□□ -2.09
PVT1-211ENST00000521600 KRTAP6-3Q3LI67 103 aa1.99□□□□□ -2.09
PVT1-211ENST00000521600 KRTAP20-1Q3LI63 56 aa1.98□□□□□ -2.09
PVT1-211ENST00000521600 H0YAA0 97 aa1.97□□□□□ -2.09
PVT1-211ENST00000521600 LCE1EQ5T753 118 aa1.97□□□□□ -2.09
PVT1-211ENST00000521600 CSAG1Q6PB30 78 aa1.95□□□□□ -2.1
PVT1-211ENST00000521600 MDN1Q9NU22 5596 aa1.92□□□□□ -2.1
PVT1-211ENST00000521600 ADM2Q7Z4H4 148 aa1.92□□□□□ -2.1
PVT1-211ENST00000521600 KMT2DO14686 5537 aa1.91□□□□□ -2.1
PVT1-211ENST00000521600 M0QZ58 72 aa1.91□□□□□ -2.1
PVT1-211ENST00000521600 KRTAP19-6Q3LI70 58 aa1.9□□□□□ -2.11
PVT1-211ENST00000521600 CAMK2N1Q7Z7J9 78 aa1.9□□□□□ -2.11
PVT1-211ENST00000521600 P0C880 135 aa1.89□□□□□ -2.11
PVT1-211ENST00000521600 LCE3EQ5T5B0 92 aa1.89□□□□□ -2.11
PVT1-211ENST00000521600 GPR98Q8WXG9 6306 aa1.88□□□□□ -2.11
PVT1-211ENST00000521600 A0A0D9SG42 100 aa1.88□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms