RNA–Protein interactions for RNA: ENST00000519254.2

CLN8-204, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 1,769 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-204ENST00000519254 KRTAP4-1Q9BYQ7 146 aa7.44□□□□□ -1.22
CLN8-204ENST00000519254 MUC17Q685J3 4493 aa7.44□□□□□ -1.22
CLN8-204ENST00000519254 LCE2BO14633 110 aa7.41□□□□□ -1.22
CLN8-204ENST00000519254 PSPHP1O15172 72 aa7.41□□□□□ -1.22
CLN8-204ENST00000519254 LINC01558Q9Y6Z2 57 aa7.41□□□□□ -1.22
CLN8-204ENST00000519254 UBR4Q5T4S7 5183 aa7.4□□□□□ -1.22
CLN8-204ENST00000519254 PRR15LQ9BU68 103 aa7.36□□□□□ -1.23
CLN8-204ENST00000519254 Q5VV11 94 aa7.34□□□□□ -1.23
CLN8-204ENST00000519254 RNF213Q63HN8 5207 aa7.3□□□□□ -1.24
CLN8-204ENST00000519254 MUC2Q02817 5179 aa7.29□□□□□ -1.24
CLN8-204ENST00000519254 RBM12B-AS1Q9P1G2 102 aa7.29□□□□□ -1.24
CLN8-204ENST00000519254 SPTSSBQ8NFR3 76 aa7.27□□□□□ -1.25
CLN8-204ENST00000519254 BRK1Q8WUW1 75 aa7.23□□□□□ -1.25
CLN8-204ENST00000519254 A0A1B0GU69 56 aa7.22□□□□□ -1.25
CLN8-204ENST00000519254 H1FX-AS1Q4G0G2 97 aa7.22□□□□□ -1.25
CLN8-204ENST00000519254 LCA10Q71F78 164 aa7.21□□□□□ -1.25
CLN8-204ENST00000519254 PMAIP1Q13794 54 aa7.2□□□□□ -1.26
CLN8-204ENST00000519254 S4R3F8 94 aa7.19□□□□□ -1.26
CLN8-204ENST00000519254 LCE2CQ5TA81 110 aa7.17□□□□□ -1.26
CLN8-204ENST00000519254 KRTAP19-2Q3LHN2 52 aa7.16□□□□□ -1.26
CLN8-204ENST00000519254 A6NED7 52 aa7.15□□□□□ -1.27
CLN8-204ENST00000519254 A8MU10 97 aa7.1□□□□□ -1.27
CLN8-204ENST00000519254 CDC42SE1Q9NRR8 79 aa7.05□□□□□ -1.28
CLN8-204ENST00000519254 LCE2AQ5TA79 106 aaPredicted RBP7.05□□□□□ -1.28
CLN8-204ENST00000519254 UQCR11O14957 56 aa7.03□□□□□ -1.28
CLN8-204ENST00000519254 CSAG1Q6PB30 78 aa7.01□□□□□ -1.29
CLN8-204ENST00000519254 H3BS24 57 aa7□□□□□ -1.29
CLN8-204ENST00000519254 KRTAP10-6P60371 365 aaPredicted RBP7□□□□□ -1.29
CLN8-204ENST00000519254 SPATA8Q6RVD6 105 aa7□□□□□ -1.29
CLN8-204ENST00000519254 FAT4Q6V0I7 4981 aa6.99□□□□□ -1.29
CLN8-204ENST00000519254 MT1HP80294 61 aa6.98□□□□□ -1.29
CLN8-204ENST00000519254 A0A1B0GU33 70 aa6.97□□□□□ -1.29
CLN8-204ENST00000519254 MIR22HGQ0VDD5 57 aa6.97□□□□□ -1.29
CLN8-204ENST00000519254 M0R2T5 61 aa6.96□□□□□ -1.3
CLN8-204ENST00000519254 FLGP20930 4061 aaPredicted RBP6.96□□□□□ -1.3
CLN8-204ENST00000519254 LORP23490 312 aaPredicted RBP6.93□□□□□ -1.3
CLN8-204ENST00000519254 H0YAA0 97 aa6.92□□□□□ -1.3
CLN8-204ENST00000519254 P0C880 135 aa6.92□□□□□ -1.3
CLN8-204ENST00000519254 ADM2Q7Z4H4 148 aa6.91□□□□□ -1.3
CLN8-204ENST00000519254 KTN1-AS1Q86SY8 53 aa6.91□□□□□ -1.3
CLN8-204ENST00000519254 KRTAP13-4Q3LI77 160 aa6.84□□□□□ -1.31
CLN8-204ENST00000519254 A6NN06 94 aa6.76□□□□□ -1.33
CLN8-204ENST00000519254 M0QZ58 72 aa6.7□□□□□ -1.34
CLN8-204ENST00000519254 A0A0D9SG42 100 aa6.69□□□□□ -1.34
CLN8-204ENST00000519254 KRTAP9-8Q9BYQ0 159 aa6.67□□□□□ -1.34
CLN8-204ENST00000519254 MT2AP02795 61 aa6.67□□□□□ -1.34
CLN8-204ENST00000519254 MT1FP04733 61 aa6.63□□□□□ -1.35
CLN8-204ENST00000519254 KRTAP10-10P60014 251 aa6.63□□□□□ -1.35
CLN8-204ENST00000519254 R4GN34 69 aa6.62□□□□□ -1.35
CLN8-204ENST00000519254 K7ERS5 55 aa6.58□□□□□ -1.36
CLN8-204ENST00000519254 KRTAP12-1P59990 96 aa6.56□□□□□ -1.36
CLN8-204ENST00000519254 KRTAP12-2P59991 146 aa6.56□□□□□ -1.36
CLN8-204ENST00000519254 LINC01554Q52M75 96 aa6.54□□□□□ -1.36
CLN8-204ENST00000519254 SPINT4Q6UDR6 99 aa6.5□□□□□ -1.37
CLN8-204ENST00000519254 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
CLN8-204ENST00000519254 KRTAP9-3Q9BYQ3 159 aa6.44□□□□□ -1.38
CLN8-204ENST00000519254 KRTAP19-1Q8IUB9 90 aa6.42□□□□□ -1.38
CLN8-204ENST00000519254 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
CLN8-204ENST00000519254 PRAC1Q96KF2 57 aa6.39□□□□□ -1.39
CLN8-204ENST00000519254 ROMO1P60602 79 aa6.38□□□□□ -1.39
CLN8-204ENST00000519254 KRTAP19-8Q3LI54 63 aa6.26□□□□□ -1.41
CLN8-204ENST00000519254 MT1BP07438 61 aa6.21□□□□□ -1.41
CLN8-204ENST00000519254 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.41
CLN8-204ENST00000519254 C10orf95Q9H7T3 257 aa6.21□□□□□ -1.41
CLN8-204ENST00000519254 PLAC4Q8WY50 150 aa6.21□□□□□ -1.42
CLN8-204ENST00000519254 KRTAP25-1Q3LHN0 102 aa6.18□□□□□ -1.42
CLN8-204ENST00000519254 USH2AO75445 5202 aa6.17□□□□□ -1.42
CLN8-204ENST00000519254 KRTAP9-2Q9BYQ4 174 aa6.14□□□□□ -1.43
CLN8-204ENST00000519254 FSIP2Q5CZC0 6907 aa6.08□□□□□ -1.44
CLN8-204ENST00000519254 SSPOA2VEC9 5147 aa5.98□□□□□ -1.45
CLN8-204ENST00000519254 MT1XP80297 61 aa5.98□□□□□ -1.45
CLN8-204ENST00000519254 KRTAP10-5P60370 271 aa5.96□□□□□ -1.46
CLN8-204ENST00000519254 TNP1P09430 55 aa5.94□□□□□ -1.46
CLN8-204ENST00000519254 KRTAP19-6Q3LI70 58 aa5.94□□□□□ -1.46
CLN8-204ENST00000519254 PRO2289Q9P1D8 64 aa5.94□□□□□ -1.46
CLN8-204ENST00000519254 A0A0A0MQY5 61 aa5.91□□□□□ -1.46
CLN8-204ENST00000519254 CRCT1Q9UGL9 99 aa5.89□□□□□ -1.47
CLN8-204ENST00000519254 KRTAP23-1A1A580 65 aa5.85□□□□□ -1.47
CLN8-204ENST00000519254 PP632Q6XCG6 107 aa5.83□□□□□ -1.48
CLN8-204ENST00000519254 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
CLN8-204ENST00000519254 KRTAP10-7P60409 375 aaPredicted RBP5.75□□□□□ -1.49
CLN8-204ENST00000519254 KRTAP9-6A0A140TA67 174 aa5.73□□□□□ -1.49
CLN8-204ENST00000519254 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
CLN8-204ENST00000519254 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
CLN8-204ENST00000519254 KRTAP8-1Q8IUC2 63 aa5.59□□□□□ -1.51
CLN8-204ENST00000519254 KRTAP4-8A0A0G2JLE6 195 aa5.57□□□□□ -1.52
CLN8-204ENST00000519254 KRTAP4-8Q9BYQ9 185 aa5.57□□□□□ -1.52
CLN8-204ENST00000519254 NDUFAF8A1L188 74 aa5.57□□□□□ -1.52
CLN8-204ENST00000519254 KMT2DO14686 5537 aa5.56□□□□□ -1.52
CLN8-204ENST00000519254 KRTAP19-4Q3LI73 84 aa5.56□□□□□ -1.52
CLN8-204ENST00000519254 MACF1Q9UPN3 7388 aaKnown RBP5.54□□□□□ -1.52
CLN8-204ENST00000519254 KRTAP15-1Q3LI76 137 aa5.54□□□□□ -1.52
CLN8-204ENST00000519254 LOC100996750A0A140TA64 210 aa5.47□□□□□ -1.53
CLN8-204ENST00000519254 KRTAP4-6Q9BYQ5 205 aa5.47□□□□□ -1.53
CLN8-204ENST00000519254 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.46□□□□□ -1.54
CLN8-204ENST00000519254 KRTAP12-3P60328 96 aa5.46□□□□□ -1.54
CLN8-204ENST00000519254 LUZP6Q538Z0 58 aa5.46□□□□□ -1.54
CLN8-204ENST00000519254 KRTAP19-5Q3LI72 72 aa5.41□□□□□ -1.54
CLN8-204ENST00000519254 SYNE2Q8WXH0 6885 aaKnown RBP5.4□□□□□ -1.54
CLN8-204ENST00000519254 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms