RNA–Protein interactions for RNA: ENST00000518916.5

MSC-AS1-204, MSC antisense RNA 1, humanhuman

TSL 3 BASIC

Gene MSC-AS1, Length 864 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSC-AS1-204ENST00000518916 LCE2CQ5TA81 110 aa7.32□□□□□ -1.24
MSC-AS1-204ENST00000518916 SERP1Q9Y6X1 66 aa7.3□□□□□ -1.24
MSC-AS1-204ENST00000518916 SPTSSBQ8NFR3 76 aa7.27□□□□□ -1.25
MSC-AS1-204ENST00000518916 LCA10Q71F78 164 aa7.25□□□□□ -1.25
MSC-AS1-204ENST00000518916 KRTAP9-2Q9BYQ4 174 aa7.22□□□□□ -1.25
MSC-AS1-204ENST00000518916 FLGP20930 4061 aaPredicted RBP7.18□□□□□ -1.26
MSC-AS1-204ENST00000518916 CSAG1Q6PB30 78 aa7.18□□□□□ -1.26
MSC-AS1-204ENST00000518916 MT1HP80294 61 aa7.17□□□□□ -1.26
MSC-AS1-204ENST00000518916 M0R2T5 61 aa7.16□□□□□ -1.26
MSC-AS1-204ENST00000518916 RPS28P62857 69 aaKnown RBP7.16□□□□□ -1.26
MSC-AS1-204ENST00000518916 KRTAP3-3Q9BYR6 98 aa7.15□□□□□ -1.26
MSC-AS1-204ENST00000518916 LCE2DQ5TA82 110 aaPredicted RBP7.12□□□□□ -1.27
MSC-AS1-204ENST00000518916 SMIM26A0A096LP01 95 aa7.07□□□□□ -1.28
MSC-AS1-204ENST00000518916 LORP23490 312 aaPredicted RBP7.06□□□□□ -1.28
MSC-AS1-204ENST00000518916 KRTAP10-6P60371 365 aaPredicted RBP7.04□□□□□ -1.28
MSC-AS1-204ENST00000518916 SEC61GP60059 68 aa7.02□□□□□ -1.29
MSC-AS1-204ENST00000518916 V9GYY9 64 aa7.02□□□□□ -1.29
MSC-AS1-204ENST00000518916 H0YAA0 97 aa6.99□□□□□ -1.29
MSC-AS1-204ENST00000518916 LINC01558Q9Y6Z2 57 aa6.98□□□□□ -1.29
MSC-AS1-204ENST00000518916 KRTAP9-6A0A140TA67 174 aa6.97□□□□□ -1.29
MSC-AS1-204ENST00000518916 A0A1B0GU69 56 aa6.97□□□□□ -1.29
MSC-AS1-204ENST00000518916 PRR15LQ9BU68 103 aa6.97□□□□□ -1.29
MSC-AS1-204ENST00000518916 ADM2Q7Z4H4 148 aa6.96□□□□□ -1.3
MSC-AS1-204ENST00000518916 Q1T7F1 81 aa6.95□□□□□ -1.3
MSC-AS1-204ENST00000518916 FSIP2Q5CZC0 6907 aa6.89□□□□□ -1.31
MSC-AS1-204ENST00000518916 KRTAP3-2Q9BYR7 98 aa6.86□□□□□ -1.31
MSC-AS1-204ENST00000518916 PSPHP1O15172 72 aa6.85□□□□□ -1.31
MSC-AS1-204ENST00000518916 P0C880 135 aa6.85□□□□□ -1.31
MSC-AS1-204ENST00000518916 CRCT1Q9UGL9 99 aa6.85□□□□□ -1.31
MSC-AS1-204ENST00000518916 KRTAP9-8Q9BYQ0 159 aa6.84□□□□□ -1.31
MSC-AS1-204ENST00000518916 MT2AP02795 61 aa6.83□□□□□ -1.32
MSC-AS1-204ENST00000518916 KRTAP10-10P60014 251 aa6.81□□□□□ -1.32
MSC-AS1-204ENST00000518916 A0A1B0GU33 70 aa6.79□□□□□ -1.32
MSC-AS1-204ENST00000518916 CRIPTQ9P021 101 aa6.78□□□□□ -1.32
MSC-AS1-204ENST00000518916 MT1FP04733 61 aa6.77□□□□□ -1.33
MSC-AS1-204ENST00000518916 Q5VV11 94 aa6.76□□□□□ -1.33
MSC-AS1-204ENST00000518916 R4GN34 69 aa6.75□□□□□ -1.33
MSC-AS1-204ENST00000518916 M0QZ58 72 aa6.72□□□□□ -1.33
MSC-AS1-204ENST00000518916 UQCR11O14957 56 aa6.72□□□□□ -1.33
MSC-AS1-204ENST00000518916 A6NED7 52 aa6.68□□□□□ -1.34
MSC-AS1-204ENST00000518916 USH2AO75445 5202 aa6.67□□□□□ -1.34
MSC-AS1-204ENST00000518916 SPATA8Q6RVD6 105 aa6.64□□□□□ -1.35
MSC-AS1-204ENST00000518916 KRTAP13-4Q3LI77 160 aa6.63□□□□□ -1.35
MSC-AS1-204ENST00000518916 SSPOA2VEC9 5147 aa6.62□□□□□ -1.35
MSC-AS1-204ENST00000518916 MIR22HGQ0VDD5 57 aa6.62□□□□□ -1.35
MSC-AS1-204ENST00000518916 SPRR2GQ9BYE4 73 aa6.62□□□□□ -1.35
MSC-AS1-204ENST00000518916 KRTAP9-3Q9BYQ3 159 aa6.62□□□□□ -1.35
MSC-AS1-204ENST00000518916 LINC01554Q52M75 96 aa6.61□□□□□ -1.35
MSC-AS1-204ENST00000518916 A0A0D9SG42 100 aa6.57□□□□□ -1.36
MSC-AS1-204ENST00000518916 KRTAP19-1Q8IUB9 90 aa6.57□□□□□ -1.36
MSC-AS1-204ENST00000518916 LCE2BO14633 110 aa6.55□□□□□ -1.36
MSC-AS1-204ENST00000518916 A8MU10 97 aa6.52□□□□□ -1.37
MSC-AS1-204ENST00000518916 CDC42SE1Q9NRR8 79 aa6.52□□□□□ -1.37
MSC-AS1-204ENST00000518916 A6NN06 94 aa6.48□□□□□ -1.37
MSC-AS1-204ENST00000518916 KRTAP19-8Q3LI54 63 aa6.47□□□□□ -1.37
MSC-AS1-204ENST00000518916 BRK1Q8WUW1 75 aa6.47□□□□□ -1.37
MSC-AS1-204ENST00000518916 FCGBPQ9Y6R7 5405 aaPredicted RBP6.44□□□□□ -1.38
MSC-AS1-204ENST00000518916 K7ERS5 55 aa6.43□□□□□ -1.38
MSC-AS1-204ENST00000518916 SPINT4Q6UDR6 99 aa6.43□□□□□ -1.38
MSC-AS1-204ENST00000518916 PLAC4Q8WY50 150 aa6.43□□□□□ -1.38
MSC-AS1-204ENST00000518916 KRTAP12-1P59990 96 aa6.4□□□□□ -1.38
MSC-AS1-204ENST00000518916 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.37□□□□□ -1.39
MSC-AS1-204ENST00000518916 MT1BP07438 61 aa6.37□□□□□ -1.39
MSC-AS1-204ENST00000518916 KRTAP12-2P59991 146 aa6.37□□□□□ -1.39
MSC-AS1-204ENST00000518916 KRTAP19-6Q3LI70 58 aa6.36□□□□□ -1.39
MSC-AS1-204ENST00000518916 CAMK2N1Q7Z7J9 78 aa6.33□□□□□ -1.4
MSC-AS1-204ENST00000518916 KRTAP9-7A8MTY7 169 aa6.27□□□□□ -1.41
MSC-AS1-204ENST00000518916 PRO0628Q9UI54 55 aa6.21□□□□□ -1.42
MSC-AS1-204ENST00000518916 PRO2289Q9P1D8 64 aa6.2□□□□□ -1.42
MSC-AS1-204ENST00000518916 MACF1Q9UPN3 7388 aaKnown RBP6.16□□□□□ -1.42
MSC-AS1-204ENST00000518916 MT1XP80297 61 aa6.13□□□□□ -1.43
MSC-AS1-204ENST00000518916 KRTAP10-5P60370 271 aa6.12□□□□□ -1.43
MSC-AS1-204ENST00000518916 PMAIP1Q13794 54 aa6.1□□□□□ -1.43
MSC-AS1-204ENST00000518916 SYNE2Q8WXH0 6885 aaKnown RBP6.09□□□□□ -1.44
MSC-AS1-204ENST00000518916 ROMO1P60602 79 aa6.06□□□□□ -1.44
MSC-AS1-204ENST00000518916 C10orf95Q9H7T3 257 aa6.04□□□□□ -1.44
MSC-AS1-204ENST00000518916 KRTAP6-3Q3LI67 103 aa6.02□□□□□ -1.45
MSC-AS1-204ENST00000518916 TNP1P09430 55 aa5.98□□□□□ -1.45
MSC-AS1-204ENST00000518916 KRTAP25-1Q3LHN0 102 aa5.94□□□□□ -1.46
MSC-AS1-204ENST00000518916 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
MSC-AS1-204ENST00000518916 KRTAP10-7P60409 375 aaPredicted RBP5.86□□□□□ -1.47
MSC-AS1-204ENST00000518916 KRTAP10-12P60413 245 aa5.83□□□□□ -1.48
MSC-AS1-204ENST00000518916 KTN1-AS1Q86SY8 53 aa5.8□□□□□ -1.48
MSC-AS1-204ENST00000518916 KRTAP5-9P26371 169 aa5.79□□□□□ -1.48
MSC-AS1-204ENST00000518916 MUC12Q9UKN1 5478 aa5.76□□□□□ -1.49
MSC-AS1-204ENST00000518916 NEBP20929 6669 aa5.76□□□□□ -1.49
MSC-AS1-204ENST00000518916 KMT2DO14686 5537 aa5.73□□□□□ -1.49
MSC-AS1-204ENST00000518916 KRTAP23-1A1A580 65 aa5.72□□□□□ -1.49
MSC-AS1-204ENST00000518916 PP632Q6XCG6 107 aa5.72□□□□□ -1.49
MSC-AS1-204ENST00000518916 LCE3AQ5TA76 89 aa5.71□□□□□ -1.5
MSC-AS1-204ENST00000518916 PRAC1Q96KF2 57 aa5.69□□□□□ -1.5
MSC-AS1-204ENST00000518916 KRTAP4-8A0A0G2JLE6 195 aa5.65□□□□□ -1.5
MSC-AS1-204ENST00000518916 KRTAP4-8Q9BYQ9 185 aa5.65□□□□□ -1.5
MSC-AS1-204ENST00000518916 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
MSC-AS1-204ENST00000518916 MDN1Q9NU22 5596 aa5.64□□□□□ -1.51
MSC-AS1-204ENST00000518916 KRTAP19-5Q3LI72 72 aa5.51□□□□□ -1.53
MSC-AS1-204ENST00000518916 KRTAP12-3P60328 96 aa5.5□□□□□ -1.53
MSC-AS1-204ENST00000518916 SPRR2FQ96RM1 72 aa5.5□□□□□ -1.53
MSC-AS1-204ENST00000518916 KRTAP20-1Q3LI63 56 aa5.49□□□□□ -1.53
MSC-AS1-204ENST00000518916 KRTAP19-7Q3SYF9 63 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms