RNA–Protein interactions for RNA: ENST00000518498.1

TFF3-204, Transcript of trefoil factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TFF3, Length 1,109 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TFF3-204ENST00000518498 C4orf26Q17RF5 130 aa9.04□□□□□ -0.96
TFF3-204ENST00000518498 FAM236DA0A1B0GTK5 79 aa9.03□□□□□ -0.96
TFF3-204ENST00000518498 FAM236CP0DP71 79 aa9.03□□□□□ -0.96
TFF3-204ENST00000518498 KRTAP19-1Q8IUB9 90 aa9□□□□□ -0.97
TFF3-204ENST00000518498 LCE2BO14633 110 aa8.99□□□□□ -0.97
TFF3-204ENST00000518498 PCP4P48539 62 aa8.98□□□□□ -0.97
TFF3-204ENST00000518498 SPANXA2-OT1Q8N9U9 137 aa8.98□□□□□ -0.97
TFF3-204ENST00000518498 MT1FP04733 61 aa8.97□□□□□ -0.97
TFF3-204ENST00000518498 A8MUN3 132 aa8.96□□□□□ -0.98
TFF3-204ENST00000518498 H7BZZ5 65 aa8.96□□□□□ -0.98
TFF3-204ENST00000518498 KRTAP10-10P60014 251 aa8.96□□□□□ -0.98
TFF3-204ENST00000518498 KRTAP9-3Q9BYQ3 159 aa8.95□□□□□ -0.98
TFF3-204ENST00000518498 FCGBPQ9Y6R7 5405 aaPredicted RBP8.93□□□□□ -0.98
TFF3-204ENST00000518498 CYSTM1Q9H1C7 97 aa8.93□□□□□ -0.98
TFF3-204ENST00000518498 H1FX-AS1Q4G0G2 97 aa8.91□□□□□ -0.98
TFF3-204ENST00000518498 DMAC1Q96GE9 116 aa8.89□□□□□ -0.99
TFF3-204ENST00000518498 KRTAP3-1Q9BYR8 98 aa8.88□□□□□ -0.99
TFF3-204ENST00000518498 ACYP2P14621 99 aa8.85□□□□□ -0.99
TFF3-204ENST00000518498 ATP5EP56381 51 aaPredicted RBP8.84□□□□□ -0.99
TFF3-204ENST00000518498 TMEM258P61165 79 aa8.83□□□□□ -1
TFF3-204ENST00000518498 MACF1Q9UPN3 7388 aaKnown RBP8.82□□□□□ -1
TFF3-204ENST00000518498 SYNE2Q8WXH0 6885 aaKnown RBP8.78□□□□□ -1
TFF3-204ENST00000518498 S4R3F8 94 aa8.77□□□□□ -1.01
TFF3-204ENST00000518498 KRTAP19-6Q3LI70 58 aa8.73□□□□□ -1.01
TFF3-204ENST00000518498 CHKB-CPT1BH3BT56 60 aa8.69□□□□□ -1.02
TFF3-204ENST00000518498 LCA10Q71F78 164 aa8.68□□□□□ -1.02
TFF3-204ENST00000518498 COA5Q86WW8 74 aa8.65□□□□□ -1.02
TFF3-204ENST00000518498 SPTSSBQ8NFR3 76 aa8.65□□□□□ -1.02
TFF3-204ENST00000518498 CSAG1Q6PB30 78 aa8.63□□□□□ -1.03
TFF3-204ENST00000518498 KRTAP3-3Q9BYR6 98 aa8.59□□□□□ -1.03
TFF3-204ENST00000518498 KRTAP6-3Q3LI67 103 aa8.56□□□□□ -1.04
TFF3-204ENST00000518498 SERP1Q9Y6X1 66 aa8.55□□□□□ -1.04
TFF3-204ENST00000518498 H0YAA0 97 aa8.42□□□□□ -1.06
TFF3-204ENST00000518498 RPS28P62857 69 aaKnown RBP8.41□□□□□ -1.06
TFF3-204ENST00000518498 SEC61GP60059 68 aa8.33□□□□□ -1.08
TFF3-204ENST00000518498 ADM2Q7Z4H4 148 aa8.31□□□□□ -1.08
TFF3-204ENST00000518498 SMIM26A0A096LP01 95 aa8.28□□□□□ -1.08
TFF3-204ENST00000518498 V9GYY9 64 aa8.26□□□□□ -1.09
TFF3-204ENST00000518498 LINC01558Q9Y6Z2 57 aa8.25□□□□□ -1.09
TFF3-204ENST00000518498 NEBP20929 6669 aa8.24□□□□□ -1.09
TFF3-204ENST00000518498 A0A1B0GU69 56 aa8.23□□□□□ -1.09
TFF3-204ENST00000518498 PRR15LQ9BU68 103 aa8.23□□□□□ -1.09
TFF3-204ENST00000518498 A6NN06 94 aa8.22□□□□□ -1.09
TFF3-204ENST00000518498 KRTAP3-2Q9BYR7 98 aa8.21□□□□□ -1.1
TFF3-204ENST00000518498 CRIPTQ9P021 101 aa8.2□□□□□ -1.1
TFF3-204ENST00000518498 Q1T7F1 81 aa8.18□□□□□ -1.1
TFF3-204ENST00000518498 P0C880 135 aa8.17□□□□□ -1.1
TFF3-204ENST00000518498 MT1BP07438 61 aa8.13□□□□□ -1.11
TFF3-204ENST00000518498 Q5VV11 94 aa8.13□□□□□ -1.11
TFF3-204ENST00000518498 KRTAP20-1Q3LI63 56 aa8.1□□□□□ -1.11
TFF3-204ENST00000518498 R4GN34 69 aa8.08□□□□□ -1.12
TFF3-204ENST00000518498 KRTAP19-8Q3LI54 63 aa8.07□□□□□ -1.12
TFF3-204ENST00000518498 A0A1B0GU33 70 aa8.06□□□□□ -1.12
TFF3-204ENST00000518498 M0QZ58 72 aa8.06□□□□□ -1.12
TFF3-204ENST00000518498 SPRR2GQ9BYE4 73 aa8.06□□□□□ -1.12
TFF3-204ENST00000518498 KRTAP10-5P60370 271 aa8.04□□□□□ -1.12
TFF3-204ENST00000518498 MUC12Q9UKN1 5478 aa8.03□□□□□ -1.12
TFF3-204ENST00000518498 PSPHP1O15172 72 aa8□□□□□ -1.13
TFF3-204ENST00000518498 KRTAP5-9P26371 169 aa7.99□□□□□ -1.13
TFF3-204ENST00000518498 UQCR11O14957 56 aa7.94□□□□□ -1.14
TFF3-204ENST00000518498 KRTAP13-4Q3LI77 160 aa7.88□□□□□ -1.15
TFF3-204ENST00000518498 SPATA8Q6RVD6 105 aa7.87□□□□□ -1.15
TFF3-204ENST00000518498 LINC01554Q52M75 96 aa7.86□□□□□ -1.15
TFF3-204ENST00000518498 KRTAP2-3P0C7H8 128 aa7.82□□□□□ -1.16
TFF3-204ENST00000518498 KRTAP2-4Q9BYR9 128 aa7.82□□□□□ -1.16
TFF3-204ENST00000518498 A6NED7 52 aa7.81□□□□□ -1.16
TFF3-204ENST00000518498 KMT2DO14686 5537 aa7.8□□□□□ -1.16
TFF3-204ENST00000518498 MIR22HGQ0VDD5 57 aa7.8□□□□□ -1.16
TFF3-204ENST00000518498 A0A0D9SG42 100 aa7.76□□□□□ -1.17
TFF3-204ENST00000518498 MDN1Q9NU22 5596 aa7.75□□□□□ -1.17
TFF3-204ENST00000518498 PLAC4Q8WY50 150 aa7.74□□□□□ -1.17
TFF3-204ENST00000518498 A8MU10 97 aa7.7□□□□□ -1.18
TFF3-204ENST00000518498 SPRR2FQ96RM1 72 aa7.68□□□□□ -1.18
TFF3-204ENST00000518498 SPRR2EP22531 72 aa7.66□□□□□ -1.18
TFF3-204ENST00000518498 SPRR2BP35325 72 aa7.66□□□□□ -1.18
TFF3-204ENST00000518498 SPRR2AP35326 72 aa7.66□□□□□ -1.18
TFF3-204ENST00000518498 SPINT4Q6UDR6 99 aa7.64□□□□□ -1.19
TFF3-204ENST00000518498 CDC42SE1Q9NRR8 79 aa7.64□□□□□ -1.19
TFF3-204ENST00000518498 KRTAP12-1P59990 96 aa7.62□□□□□ -1.19
TFF3-204ENST00000518498 PRO2289Q9P1D8 64 aa7.61□□□□□ -1.19
TFF3-204ENST00000518498 K7ERS5 55 aa7.6□□□□□ -1.19
TFF3-204ENST00000518498 KRTAP12-2P59991 146 aa7.56□□□□□ -1.2
TFF3-204ENST00000518498 CAMK2N1Q7Z7J9 78 aa7.54□□□□□ -1.2
TFF3-204ENST00000518498 KRTAP8-1Q8IUC2 63 aa7.54□□□□□ -1.2
TFF3-204ENST00000518498 KRTAP2-2Q9BYT5 123 aa7.54□□□□□ -1.2
TFF3-204ENST00000518498 KRTAP2-1Q9BYU5 128 aa7.54□□□□□ -1.2
TFF3-204ENST00000518498 MT1XP80297 61 aa7.53□□□□□ -1.2
TFF3-204ENST00000518498 LCE1AQ5T7P2 110 aa7.5□□□□□ -1.21
TFF3-204ENST00000518498 BRK1Q8WUW1 75 aa7.48□□□□□ -1.21
TFF3-204ENST00000518498 SPRR2DP22532 72 aa7.42□□□□□ -1.22
TFF3-204ENST00000518498 KRTAP4-8A0A0G2JLE6 195 aa7.35□□□□□ -1.23
TFF3-204ENST00000518498 KRTAP4-8Q9BYQ9 185 aa7.35□□□□□ -1.23
TFF3-204ENST00000518498 LCE3BQ5TA77 95 aa7.25□□□□□ -1.25
TFF3-204ENST00000518498 C10orf95Q9H7T3 257 aa7.21□□□□□ -1.26
TFF3-204ENST00000518498 KRTAP10-7P60409 375 aaPredicted RBP7.19□□□□□ -1.26
TFF3-204ENST00000518498 PRO0628Q9UI54 55 aa7.19□□□□□ -1.26
TFF3-204ENST00000518498 KRTAP10-12P60413 245 aa7.16□□□□□ -1.26
TFF3-204ENST00000518498 ROMO1P60602 79 aa7.15□□□□□ -1.26
TFF3-204ENST00000518498 TNP1P09430 55 aa7.14□□□□□ -1.27
TFF3-204ENST00000518498 PMAIP1Q13794 54 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms