RNA–Protein interactions for RNA: ENST00000515859.5

TUSC3-213, Transcript of tumor suppressor candidate 3, humanhuman

TSL 5

Gene TUSC3, Length 1,627 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUSC3-213ENST00000515859 COA5Q86WW8 74 aa12.19□□□□□ -0.46
TUSC3-213ENST00000515859 CHKB-CPT1BH3BT56 60 aa12.17□□□□□ -0.46
TUSC3-213ENST00000515859 LCA10Q71F78 164 aa12.17□□□□□ -0.46
TUSC3-213ENST00000515859 MT1HP80294 61 aa12.1□□□□□ -0.47
TUSC3-213ENST00000515859 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
TUSC3-213ENST00000515859 SERP1Q9Y6X1 66 aa12.08□□□□□ -0.48
TUSC3-213ENST00000515859 SPTSSBQ8NFR3 76 aa12.05□□□□□ -0.48
TUSC3-213ENST00000515859 CSAG1Q6PB30 78 aa12.04□□□□□ -0.48
TUSC3-213ENST00000515859 M0R2T5 61 aa11.98□□□□□ -0.49
TUSC3-213ENST00000515859 RPS28P62857 69 aaKnown RBP11.92□□□□□ -0.5
TUSC3-213ENST00000515859 LCE2AQ5TA79 106 aaPredicted RBP11.88□□□□□ -0.51
TUSC3-213ENST00000515859 H0YAA0 97 aa11.74□□□□□ -0.53
TUSC3-213ENST00000515859 SMIM26A0A096LP01 95 aa11.71□□□□□ -0.53
TUSC3-213ENST00000515859 KRTAP10-6P60371 365 aaPredicted RBP11.71□□□□□ -0.53
TUSC3-213ENST00000515859 LORP23490 312 aaPredicted RBP11.66□□□□□ -0.54
TUSC3-213ENST00000515859 SEC61GP60059 68 aa11.64□□□□□ -0.55
TUSC3-213ENST00000515859 ADM2Q7Z4H4 148 aa11.63□□□□□ -0.55
TUSC3-213ENST00000515859 LINC01558Q9Y6Z2 57 aa11.63□□□□□ -0.55
TUSC3-213ENST00000515859 V9GYY9 64 aa11.62□□□□□ -0.55
TUSC3-213ENST00000515859 KRTAP9-8Q9BYQ0 159 aa11.6□□□□□ -0.55
TUSC3-213ENST00000515859 Q1T7F1 81 aa11.57□□□□□ -0.56
TUSC3-213ENST00000515859 A0A1B0GU69 56 aa11.57□□□□□ -0.56
TUSC3-213ENST00000515859 KRTAP3-2Q9BYR7 98 aa11.57□□□□□ -0.56
TUSC3-213ENST00000515859 MT2AP02795 61 aa11.53□□□□□ -0.56
TUSC3-213ENST00000515859 PRR15LQ9BU68 103 aa11.52□□□□□ -0.57
TUSC3-213ENST00000515859 P0C880 135 aa11.49□□□□□ -0.57
TUSC3-213ENST00000515859 KRTAP10-10P60014 251 aa11.46□□□□□ -0.58
TUSC3-213ENST00000515859 MT1FP04733 61 aa11.44□□□□□ -0.58
TUSC3-213ENST00000515859 CRIPTQ9P021 101 aa11.38□□□□□ -0.59
TUSC3-213ENST00000515859 PSPHP1O15172 72 aa11.35□□□□□ -0.59
TUSC3-213ENST00000515859 A0A1B0GU33 70 aa11.31□□□□□ -0.6
TUSC3-213ENST00000515859 R4GN34 69 aa11.28□□□□□ -0.6
TUSC3-213ENST00000515859 M0QZ58 72 aa11.26□□□□□ -0.61
TUSC3-213ENST00000515859 Q5VV11 94 aa11.24□□□□□ -0.61
TUSC3-213ENST00000515859 KRTAP9-3Q9BYQ3 159 aa11.21□□□□□ -0.61
TUSC3-213ENST00000515859 UQCR11O14957 56 aa11.17□□□□□ -0.62
TUSC3-213ENST00000515859 SPRR2GQ9BYE4 73 aa11.17□□□□□ -0.62
TUSC3-213ENST00000515859 KRTAP13-4Q3LI77 160 aa11.13□□□□□ -0.63
TUSC3-213ENST00000515859 KRTAP19-1Q8IUB9 90 aa11.13□□□□□ -0.63
TUSC3-213ENST00000515859 SPATA8Q6RVD6 105 aa11.09□□□□□ -0.63
TUSC3-213ENST00000515859 A6NED7 52 aa11.03□□□□□ -0.64
TUSC3-213ENST00000515859 LINC01554Q52M75 96 aa11□□□□□ -0.65
TUSC3-213ENST00000515859 MIR22HGQ0VDD5 57 aa10.99□□□□□ -0.65
TUSC3-213ENST00000515859 LCE2DQ5TA82 110 aaPredicted RBP10.96□□□□□ -0.65
TUSC3-213ENST00000515859 KRTAP19-8Q3LI54 63 aa10.93□□□□□ -0.66
TUSC3-213ENST00000515859 LCE2BO14633 110 aa10.92□□□□□ -0.66
TUSC3-213ENST00000515859 A0A0D9SG42 100 aa10.91□□□□□ -0.66
TUSC3-213ENST00000515859 A6NN06 94 aa10.87□□□□□ -0.67
TUSC3-213ENST00000515859 A8MU10 97 aa10.87□□□□□ -0.67
TUSC3-213ENST00000515859 CDC42SE1Q9NRR8 79 aa10.8□□□□□ -0.68
TUSC3-213ENST00000515859 MT1BP07438 61 aa10.76□□□□□ -0.69
TUSC3-213ENST00000515859 PLAC4Q8WY50 150 aa10.75□□□□□ -0.69
TUSC3-213ENST00000515859 KRTAP12-1P59990 96 aa10.72□□□□□ -0.69
TUSC3-213ENST00000515859 USH2AO75445 5202 aa10.7□□□□□ -0.7
TUSC3-213ENST00000515859 SPINT4Q6UDR6 99 aa10.7□□□□□ -0.7
TUSC3-213ENST00000515859 KRTAP9-2Q9BYQ4 174 aa10.67□□□□□ -0.7
TUSC3-213ENST00000515859 KRTAP12-2P59991 146 aa10.66□□□□□ -0.7
TUSC3-213ENST00000515859 BRK1Q8WUW1 75 aa10.63□□□□□ -0.71
TUSC3-213ENST00000515859 K7ERS5 55 aa10.62□□□□□ -0.71
TUSC3-213ENST00000515859 CAMK2N1Q7Z7J9 78 aa10.52□□□□□ -0.73
TUSC3-213ENST00000515859 FSIP2Q5CZC0 6907 aa10.48□□□□□ -0.73
TUSC3-213ENST00000515859 SSPOA2VEC9 5147 aa10.41□□□□□ -0.74
TUSC3-213ENST00000515859 KRTAP19-6Q3LI70 58 aa10.39□□□□□ -0.75
TUSC3-213ENST00000515859 PRO2289Q9P1D8 64 aa10.36□□□□□ -0.75
TUSC3-213ENST00000515859 MT1XP80297 61 aa10.35□□□□□ -0.75
TUSC3-213ENST00000515859 KRTAP10-5P60370 271 aa10.33□□□□□ -0.76
TUSC3-213ENST00000515859 CRCT1Q9UGL9 99 aa10.25□□□□□ -0.77
TUSC3-213ENST00000515859 PRO0628Q9UI54 55 aa10.25□□□□□ -0.77
TUSC3-213ENST00000515859 C10orf95Q9H7T3 257 aa10.15□□□□□ -0.78
TUSC3-213ENST00000515859 PMAIP1Q13794 54 aa10.07□□□□□ -0.8
TUSC3-213ENST00000515859 ROMO1P60602 79 aa10.07□□□□□ -0.8
TUSC3-213ENST00000515859 FCGBPQ9Y6R7 5405 aaPredicted RBP10.05□□□□□ -0.8
TUSC3-213ENST00000515859 KRTAP9-6A0A140TA67 174 aa9.97□□□□□ -0.81
TUSC3-213ENST00000515859 TNP1P09430 55 aa9.97□□□□□ -0.81
TUSC3-213ENST00000515859 KRTAP25-1Q3LHN0 102 aa9.9□□□□□ -0.82
TUSC3-213ENST00000515859 KRTAP10-7P60409 375 aaPredicted RBP9.89□□□□□ -0.83
TUSC3-213ENST00000515859 KRTAP10-12P60413 245 aa9.85□□□□□ -0.83
TUSC3-213ENST00000515859 KRTAP23-1A1A580 65 aa9.6□□□□□ -0.87
TUSC3-213ENST00000515859 KRTAP4-8A0A0G2JLE6 195 aa9.59□□□□□ -0.87
TUSC3-213ENST00000515859 KRTAP4-8Q9BYQ9 185 aa9.59□□□□□ -0.87
TUSC3-213ENST00000515859 MACF1Q9UPN3 7388 aaKnown RBP9.59□□□□□ -0.87
TUSC3-213ENST00000515859 KMT2DO14686 5537 aa9.57□□□□□ -0.88
TUSC3-213ENST00000515859 LCE3AQ5TA76 89 aa9.54□□□□□ -0.88
TUSC3-213ENST00000515859 KTN1-AS1Q86SY8 53 aa9.53□□□□□ -0.88
TUSC3-213ENST00000515859 PP632Q6XCG6 107 aa9.51□□□□□ -0.89
TUSC3-213ENST00000515859 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.49□□□□□ -0.89
TUSC3-213ENST00000515859 KRTAP8-1Q8IUC2 63 aa9.47□□□□□ -0.89
TUSC3-213ENST00000515859 PRAC1Q96KF2 57 aa9.4□□□□□ -0.9
TUSC3-213ENST00000515859 SYNE2Q8WXH0 6885 aaKnown RBP9.3□□□□□ -0.92
TUSC3-213ENST00000515859 KRTAP19-5Q3LI72 72 aa9.27□□□□□ -0.93
TUSC3-213ENST00000515859 KRTAP19-7Q3SYF9 63 aa9.23□□□□□ -0.93
TUSC3-213ENST00000515859 KRTAP5-9P26371 169 aa9.21□□□□□ -0.93
TUSC3-213ENST00000515859 KRTAP12-3P60328 96 aa9.21□□□□□ -0.93
TUSC3-213ENST00000515859 KRTAP6-3Q3LI67 103 aa9.21□□□□□ -0.93
TUSC3-213ENST00000515859 SPRR2FQ96RM1 72 aa9.18□□□□□ -0.94
TUSC3-213ENST00000515859 MT1EP04732 61 aa9.1□□□□□ -0.95
TUSC3-213ENST00000515859 KRTAP9-7A8MTY7 169 aa9.09□□□□□ -0.95
TUSC3-213ENST00000515859 MUC12Q9UKN1 5478 aa8.99□□□□□ -0.97
TUSC3-213ENST00000515859 SVIPQ8NHG7 77 aa8.98□□□□□ -0.97
TUSC3-213ENST00000515859 KRTAP15-1Q3LI76 137 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms