RNA–Protein interactions for RNA: ENST00000515609.1

TPM3-222, Transcript of tropomyosin 3, humanhuman

TSL 3

Gene TPM3, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-222ENST00000515609 A0A1B0GU69 56 aa4.73□□□□□ -1.65
TPM3-222ENST00000515609 UBR4Q5T4S7 5183 aa4.73□□□□□ -1.65
TPM3-222ENST00000515609 LCA10Q71F78 164 aa4.72□□□□□ -1.65
TPM3-222ENST00000515609 KRTAP4-1Q9BYQ7 146 aa4.71□□□□□ -1.66
TPM3-222ENST00000515609 LRP2P98164 4655 aa4.69□□□□□ -1.66
TPM3-222ENST00000515609 LPAP08519 4548 aa4.67□□□□□ -1.66
TPM3-222ENST00000515609 PSPHP1O15172 72 aa4.66□□□□□ -1.66
TPM3-222ENST00000515609 H0YAA0 97 aa4.64□□□□□ -1.67
TPM3-222ENST00000515609 KRTAP3-3Q9BYR6 98 aa4.64□□□□□ -1.67
TPM3-222ENST00000515609 HMCN2Q8NDA2 5059 aa4.62□□□□□ -1.67
TPM3-222ENST00000515609 UQCR11O14957 56 aa4.61□□□□□ -1.67
TPM3-222ENST00000515609 A6NED7 52 aa4.6□□□□□ -1.67
TPM3-222ENST00000515609 KRTAP19-2Q3LHN2 52 aa4.6□□□□□ -1.67
TPM3-222ENST00000515609 Q5VV11 94 aa4.6□□□□□ -1.67
TPM3-222ENST00000515609 MUC17Q685J3 4493 aa4.57□□□□□ -1.68
TPM3-222ENST00000515609 A0A1B0GU33 70 aa4.57□□□□□ -1.68
TPM3-222ENST00000515609 M0R2T5 61 aa4.56□□□□□ -1.68
TPM3-222ENST00000515609 ADM2Q7Z4H4 148 aa4.55□□□□□ -1.68
TPM3-222ENST00000515609 M0QZ58 72 aa4.52□□□□□ -1.69
TPM3-222ENST00000515609 MIR22HGQ0VDD5 57 aa4.52□□□□□ -1.69
TPM3-222ENST00000515609 LCE2CQ5TA81 110 aa4.52□□□□□ -1.69
TPM3-222ENST00000515609 BRK1Q8WUW1 75 aa4.51□□□□□ -1.69
TPM3-222ENST00000515609 CDC42SE1Q9NRR8 79 aa4.51□□□□□ -1.69
TPM3-222ENST00000515609 CRIPTQ9P021 101 aa4.5□□□□□ -1.69
TPM3-222ENST00000515609 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
TPM3-222ENST00000515609 SPATA8Q6RVD6 105 aa4.48□□□□□ -1.69
TPM3-222ENST00000515609 KRTAP3-2Q9BYR7 98 aa4.48□□□□□ -1.69
TPM3-222ENST00000515609 MT1HP80294 61 aa4.47□□□□□ -1.69
TPM3-222ENST00000515609 K7ERS5 55 aa4.46□□□□□ -1.7
TPM3-222ENST00000515609 R4GN34 69 aa4.46□□□□□ -1.7
TPM3-222ENST00000515609 P0C880 135 aa4.45□□□□□ -1.7
TPM3-222ENST00000515609 PRO0628Q9UI54 55 aa4.44□□□□□ -1.7
TPM3-222ENST00000515609 MUC2Q02817 5179 aa4.38□□□□□ -1.71
TPM3-222ENST00000515609 RNF213Q63HN8 5207 aa4.34□□□□□ -1.71
TPM3-222ENST00000515609 KRTAP10-10P60014 251 aa4.34□□□□□ -1.71
TPM3-222ENST00000515609 FLGP20930 4061 aaPredicted RBP4.34□□□□□ -1.71
TPM3-222ENST00000515609 A6NN06 94 aa4.33□□□□□ -1.72
TPM3-222ENST00000515609 A0A0D9SG42 100 aa4.32□□□□□ -1.72
TPM3-222ENST00000515609 KRTAP13-4Q3LI77 160 aa4.31□□□□□ -1.72
TPM3-222ENST00000515609 LINC01554Q52M75 96 aa4.31□□□□□ -1.72
TPM3-222ENST00000515609 PMAIP1Q13794 54 aa4.3□□□□□ -1.72
TPM3-222ENST00000515609 LCE2AQ5TA79 106 aaPredicted RBP4.3□□□□□ -1.72
TPM3-222ENST00000515609 KRTAP9-8Q9BYQ0 159 aa4.3□□□□□ -1.72
TPM3-222ENST00000515609 A8MU10 97 aa4.29□□□□□ -1.72
TPM3-222ENST00000515609 MT2AP02795 61 aa4.29□□□□□ -1.72
TPM3-222ENST00000515609 LORP23490 312 aaPredicted RBP4.29□□□□□ -1.72
TPM3-222ENST00000515609 SPRR2GQ9BYE4 73 aa4.28□□□□□ -1.72
TPM3-222ENST00000515609 SPINT4Q6UDR6 99 aa4.26□□□□□ -1.73
TPM3-222ENST00000515609 KRTAP9-6A0A140TA67 174 aa4.24□□□□□ -1.73
TPM3-222ENST00000515609 MT1FP04733 61 aa4.24□□□□□ -1.73
TPM3-222ENST00000515609 KRTAP12-1P59990 96 aa4.23□□□□□ -1.73
TPM3-222ENST00000515609 PLAC4Q8WY50 150 aa4.23□□□□□ -1.73
TPM3-222ENST00000515609 KRTAP9-2Q9BYQ4 174 aa4.23□□□□□ -1.73
TPM3-222ENST00000515609 FAT4Q6V0I7 4981 aa4.23□□□□□ -1.73
TPM3-222ENST00000515609 CAMK2N1Q7Z7J9 78 aa4.2□□□□□ -1.74
TPM3-222ENST00000515609 KRTAP12-2P59991 146 aa4.18□□□□□ -1.74
TPM3-222ENST00000515609 KRTAP19-1Q8IUB9 90 aa4.18□□□□□ -1.74
TPM3-222ENST00000515609 KRTAP19-8Q3LI54 63 aa4.15□□□□□ -1.75
TPM3-222ENST00000515609 KRTAP9-3Q9BYQ3 159 aa4.15□□□□□ -1.75
TPM3-222ENST00000515609 ROMO1P60602 79 aa4.14□□□□□ -1.75
TPM3-222ENST00000515609 KTN1-AS1Q86SY8 53 aa4.11□□□□□ -1.75
TPM3-222ENST00000515609 PRO2289Q9P1D8 64 aa4.07□□□□□ -1.76
TPM3-222ENST00000515609 MT1BP07438 61 aa4.02□□□□□ -1.77
TPM3-222ENST00000515609 KRTAP25-1Q3LHN0 102 aa4.02□□□□□ -1.77
TPM3-222ENST00000515609 TNP1P09430 55 aa4□□□□□ -1.77
TPM3-222ENST00000515609 LCE2BO14633 110 aa3.99□□□□□ -1.77
TPM3-222ENST00000515609 LCE2DQ5TA82 110 aaPredicted RBP3.99□□□□□ -1.77
TPM3-222ENST00000515609 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
TPM3-222ENST00000515609 FSIP2Q5CZC0 6907 aa3.98□□□□□ -1.77
TPM3-222ENST00000515609 C10orf95Q9H7T3 257 aa3.97□□□□□ -1.77
TPM3-222ENST00000515609 PP632Q6XCG6 107 aa3.94□□□□□ -1.78
TPM3-222ENST00000515609 KRTAP23-1A1A580 65 aa3.92□□□□□ -1.78
TPM3-222ENST00000515609 CRCT1Q9UGL9 99 aa3.92□□□□□ -1.78
TPM3-222ENST00000515609 KRTAP10-5P60370 271 aa3.89□□□□□ -1.79
TPM3-222ENST00000515609 MT1XP80297 61 aa3.89□□□□□ -1.79
TPM3-222ENST00000515609 PRAC1Q96KF2 57 aa3.88□□□□□ -1.79
TPM3-222ENST00000515609 KRTAP19-6Q3LI70 58 aa3.84□□□□□ -1.79
TPM3-222ENST00000515609 KRTAP10-12P60413 245 aa3.78□□□□□ -1.8
TPM3-222ENST00000515609 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
TPM3-222ENST00000515609 KRTAP10-7P60409 375 aaPredicted RBP3.71□□□□□ -1.82
TPM3-222ENST00000515609 LCE3AQ5TA76 89 aa3.69□□□□□ -1.82
TPM3-222ENST00000515609 USH2AO75445 5202 aa3.69□□□□□ -1.82
TPM3-222ENST00000515609 KRTAP8-1Q8IUC2 63 aa3.68□□□□□ -1.82
TPM3-222ENST00000515609 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.67□□□□□ -1.82
TPM3-222ENST00000515609 KRTAP12-3P60328 96 aa3.61□□□□□ -1.83
TPM3-222ENST00000515609 SSPOA2VEC9 5147 aa3.6□□□□□ -1.83
TPM3-222ENST00000515609 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
TPM3-222ENST00000515609 KRTAP15-1Q3LI76 137 aa3.55□□□□□ -1.84
TPM3-222ENST00000515609 KRTAP4-8A0A0G2JLE6 195 aa3.53□□□□□ -1.84
TPM3-222ENST00000515609 KRTAP4-8Q9BYQ9 185 aa3.53□□□□□ -1.84
TPM3-222ENST00000515609 SYNE2Q8WXH0 6885 aaKnown RBP3.52□□□□□ -1.85
TPM3-222ENST00000515609 KRTAP19-5Q3LI72 72 aa3.52□□□□□ -1.85
TPM3-222ENST00000515609 MACF1Q9UPN3 7388 aaKnown RBP3.5□□□□□ -1.85
TPM3-222ENST00000515609 FCGBPQ9Y6R7 5405 aaPredicted RBP3.47□□□□□ -1.85
TPM3-222ENST00000515609 KRTAP19-7Q3SYF9 63 aa3.46□□□□□ -1.86
TPM3-222ENST00000515609 MT1EP04732 61 aa3.43□□□□□ -1.86
TPM3-222ENST00000515609 SPRR2FQ96RM1 72 aa3.41□□□□□ -1.86
TPM3-222ENST00000515609 LUZP6Q538Z0 58 aa3.4□□□□□ -1.87
TPM3-222ENST00000515609 KRTAP5-9P26371 169 aa3.37□□□□□ -1.87
TPM3-222ENST00000515609 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms