RNA–Protein interactions for RNA: ENST00000515587.1

PDCD6-211, Transcript of programmed cell death 6, humanhuman

TSL 1 (best)

Gene PDCD6, Length 855 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-211ENST00000515587 KRTAP3-1Q9BYR8 98 aa7.34□□□□□ -1.23
PDCD6-211ENST00000515587 SYNE2Q8WXH0 6885 aaKnown RBP7.31□□□□□ -1.24
PDCD6-211ENST00000515587 SERP2Q8N6R1 65 aa7.31□□□□□ -1.24
PDCD6-211ENST00000515587 S4R3F8 94 aa7.31□□□□□ -1.24
PDCD6-211ENST00000515587 A8MUN3 132 aa7.28□□□□□ -1.24
PDCD6-211ENST00000515587 MACF1Q9UPN3 7388 aaKnown RBP7.26□□□□□ -1.25
PDCD6-211ENST00000515587 LCA10Q71F78 164 aa7.23□□□□□ -1.25
PDCD6-211ENST00000515587 C20orf197Q8N268 126 aa7.22□□□□□ -1.25
PDCD6-211ENST00000515587 KRTAP9-8Q9BYQ0 159 aa7.22□□□□□ -1.25
PDCD6-211ENST00000515587 SNURFQ9Y675 71 aa7.22□□□□□ -1.25
PDCD6-211ENST00000515587 CSAG1Q6PB30 78 aa7.21□□□□□ -1.26
PDCD6-211ENST00000515587 MT2AP02795 61 aa7.18□□□□□ -1.26
PDCD6-211ENST00000515587 COX7CP15954 63 aa7.17□□□□□ -1.26
PDCD6-211ENST00000515587 KRTAP19-1Q8IUB9 90 aa7.17□□□□□ -1.26
PDCD6-211ENST00000515587 DMAC1Q96GE9 116 aa7.16□□□□□ -1.26
PDCD6-211ENST00000515587 NDUFC1O43677 76 aa7.15□□□□□ -1.26
PDCD6-211ENST00000515587 KRTAP10-10P60014 251 aa7.15□□□□□ -1.26
PDCD6-211ENST00000515587 ANAPC13Q9BS18 74 aa7.14□□□□□ -1.27
PDCD6-211ENST00000515587 MT1FP04733 61 aa7.11□□□□□ -1.27
PDCD6-211ENST00000515587 ACYP2P14621 99 aa7.1□□□□□ -1.27
PDCD6-211ENST00000515587 SPANXA2-OT1Q8N9U9 137 aa7.09□□□□□ -1.27
PDCD6-211ENST00000515587 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
PDCD6-211ENST00000515587 SPTSSBQ8NFR3 76 aa6.99□□□□□ -1.29
PDCD6-211ENST00000515587 KRTAP6-3Q3LI67 103 aa6.98□□□□□ -1.29
PDCD6-211ENST00000515587 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
PDCD6-211ENST00000515587 H0YAA0 97 aa6.96□□□□□ -1.3
PDCD6-211ENST00000515587 NEBP20929 6669 aa6.95□□□□□ -1.3
PDCD6-211ENST00000515587 H7BZZ5 65 aa6.95□□□□□ -1.3
PDCD6-211ENST00000515587 CYSTM1Q9H1C7 97 aa6.94□□□□□ -1.3
PDCD6-211ENST00000515587 CCDC179H3BU77 68 aa6.93□□□□□ -1.3
PDCD6-211ENST00000515587 ADM2Q7Z4H4 148 aa6.9□□□□□ -1.3
PDCD6-211ENST00000515587 CRIPTQ9P021 101 aa6.87□□□□□ -1.31
PDCD6-211ENST00000515587 COA5Q86WW8 74 aa6.86□□□□□ -1.31
PDCD6-211ENST00000515587 KRTAP19-6Q3LI70 58 aa6.84□□□□□ -1.31
PDCD6-211ENST00000515587 KRTAP20-1Q3LI63 56 aa6.82□□□□□ -1.32
PDCD6-211ENST00000515587 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
PDCD6-211ENST00000515587 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
PDCD6-211ENST00000515587 P0C880 135 aa6.76□□□□□ -1.33
PDCD6-211ENST00000515587 MUC12Q9UKN1 5478 aa6.76□□□□□ -1.33
PDCD6-211ENST00000515587 H3BS24 57 aa6.74□□□□□ -1.33
PDCD6-211ENST00000515587 TMEM258P61165 79 aa6.74□□□□□ -1.33
PDCD6-211ENST00000515587 R4GN34 69 aa6.73□□□□□ -1.33
PDCD6-211ENST00000515587 Q5VV11 94 aa6.71□□□□□ -1.34
PDCD6-211ENST00000515587 M0QZ58 72 aa6.68□□□□□ -1.34
PDCD6-211ENST00000515587 SEC61GP60059 68 aa6.68□□□□□ -1.34
PDCD6-211ENST00000515587 KRTAP19-8Q3LI54 63 aa6.68□□□□□ -1.34
PDCD6-211ENST00000515587 PCP4P48539 62 aa6.66□□□□□ -1.34
PDCD6-211ENST00000515587 SERP1Q9Y6X1 66 aa6.64□□□□□ -1.35
PDCD6-211ENST00000515587 MT1BP07438 61 aa6.61□□□□□ -1.35
PDCD6-211ENST00000515587 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
PDCD6-211ENST00000515587 A0A1B0GU69 56 aa6.54□□□□□ -1.36
PDCD6-211ENST00000515587 PLAC4Q8WY50 150 aa6.54□□□□□ -1.36
PDCD6-211ENST00000515587 KMT2DO14686 5537 aa6.5□□□□□ -1.37
PDCD6-211ENST00000515587 PRR15LQ9BU68 103 aa6.49□□□□□ -1.37
PDCD6-211ENST00000515587 A0A1B0GU33 70 aa6.48□□□□□ -1.37
PDCD6-211ENST00000515587 A6NN06 94 aa6.47□□□□□ -1.37
PDCD6-211ENST00000515587 LINC01558Q9Y6Z2 57 aa6.44□□□□□ -1.38
PDCD6-211ENST00000515587 KRTAP13-4Q3LI77 160 aa6.43□□□□□ -1.38
PDCD6-211ENST00000515587 KRTAP2-3P0C7H8 128 aa6.42□□□□□ -1.38
PDCD6-211ENST00000515587 KRTAP2-4Q9BYR9 128 aa6.42□□□□□ -1.38
PDCD6-211ENST00000515587 MDN1Q9NU22 5596 aa6.41□□□□□ -1.38
PDCD6-211ENST00000515587 KRTAP10-5P60370 271 aa6.41□□□□□ -1.38
PDCD6-211ENST00000515587 PRO2289Q9P1D8 64 aa6.39□□□□□ -1.39
PDCD6-211ENST00000515587 SPATA8Q6RVD6 105 aa6.38□□□□□ -1.39
PDCD6-211ENST00000515587 KRTAP5-9P26371 169 aa6.35□□□□□ -1.39
PDCD6-211ENST00000515587 V9GYY9 64 aa6.35□□□□□ -1.39
PDCD6-211ENST00000515587 A0A0D9SG42 100 aa6.34□□□□□ -1.39
PDCD6-211ENST00000515587 SMIM26A0A096LP01 95 aa6.33□□□□□ -1.4
PDCD6-211ENST00000515587 MT1XP80297 61 aa6.29□□□□□ -1.4
PDCD6-211ENST00000515587 RPS28P62857 69 aaKnown RBP6.27□□□□□ -1.41
PDCD6-211ENST00000515587 Q1T7F1 81 aa6.27□□□□□ -1.41
PDCD6-211ENST00000515587 LOC100996750A0A140TA64 210 aa6.26□□□□□ -1.41
PDCD6-211ENST00000515587 CAMK2N1Q7Z7J9 78 aa6.26□□□□□ -1.41
PDCD6-211ENST00000515587 SVIPQ8NHG7 77 aa6.26□□□□□ -1.41
PDCD6-211ENST00000515587 KRTAP4-6Q9BYQ5 205 aa6.26□□□□□ -1.41
PDCD6-211ENST00000515587 UQCR11O14957 56 aa6.25□□□□□ -1.41
PDCD6-211ENST00000515587 SPINT4Q6UDR6 99 aa6.25□□□□□ -1.41
PDCD6-211ENST00000515587 PSPHP1O15172 72 aa6.21□□□□□ -1.42
PDCD6-211ENST00000515587 A8MU10 97 aa6.2□□□□□ -1.42
PDCD6-211ENST00000515587 KRTAP12-1P59990 96 aa6.19□□□□□ -1.42
PDCD6-211ENST00000515587 GPR98Q8WXG9 6306 aa6.19□□□□□ -1.42
PDCD6-211ENST00000515587 KRTAP2-2Q9BYT5 123 aa6.18□□□□□ -1.42
PDCD6-211ENST00000515587 KRTAP2-1Q9BYU5 128 aa6.18□□□□□ -1.42
PDCD6-211ENST00000515587 KRTAP12-2P59991 146 aa6.15□□□□□ -1.42
PDCD6-211ENST00000515587 MIR22HGQ0VDD5 57 aa6.13□□□□□ -1.43
PDCD6-211ENST00000515587 SPRR2EP22531 72 aa6.1□□□□□ -1.43
PDCD6-211ENST00000515587 SPRR2BP35325 72 aa6.1□□□□□ -1.43
PDCD6-211ENST00000515587 SPRR2AP35326 72 aa6.1□□□□□ -1.43
PDCD6-211ENST00000515587 A6NED7 52 aa6.05□□□□□ -1.44
PDCD6-211ENST00000515587 SPRR2FQ96RM1 72 aa6.02□□□□□ -1.45
PDCD6-211ENST00000515587 K7ERS5 55 aa6.01□□□□□ -1.45
PDCD6-211ENST00000515587 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
PDCD6-211ENST00000515587 KRTAP10-12P60413 245 aa5.99□□□□□ -1.45
PDCD6-211ENST00000515587 KRTAP8-1Q8IUC2 63 aa5.94□□□□□ -1.46
PDCD6-211ENST00000515587 LCE1AQ5T7P2 110 aa5.93□□□□□ -1.46
PDCD6-211ENST00000515587 KRTAP4-8Q9BYQ9 185 aa5.91□□□□□ -1.46
PDCD6-211ENST00000515587 SPRR2DP22532 72 aa5.9□□□□□ -1.46
PDCD6-211ENST00000515587 KRTAP4-8A0A0G2JLE6 195 aa5.89□□□□□ -1.47
PDCD6-211ENST00000515587 KRTAP19-4Q3LI73 84 aa5.89□□□□□ -1.47
PDCD6-211ENST00000515587 C10orf95Q9H7T3 257 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms