RNA–Protein interactions for RNA: ENST00000515529.4

DDR1-279, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 340 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-279ENST00000515529 A8MUN3 132 aa12.19□□□□□ -0.46
DDR1-279ENST00000515529 TRAV7A0A075B6U4 112 aa12.15□□□□□ -0.46
DDR1-279ENST00000515529 NDUFC1O43677 76 aa12.08□□□□□ -0.48
DDR1-279ENST00000515529 KRTAP3-3Q9BYR6 98 aa12.08□□□□□ -0.48
DDR1-279ENST00000515529 LCE2BO14633 110 aa12.06□□□□□ -0.48
DDR1-279ENST00000515529 USH2AO75445 5202 aa12□□□□□ -0.49
DDR1-279ENST00000515529 DMAC1Q96GE9 116 aa11.95□□□□□ -0.5
DDR1-279ENST00000515529 SERP2Q8N6R1 65 aa11.89□□□□□ -0.51
DDR1-279ENST00000515529 SNURFQ9Y675 71 aa11.86□□□□□ -0.51
DDR1-279ENST00000515529 C20orf197Q8N268 126 aa11.81□□□□□ -0.52
DDR1-279ENST00000515529 SSPOA2VEC9 5147 aa11.8□□□□□ -0.52
DDR1-279ENST00000515529 H0YAA0 97 aa11.79□□□□□ -0.52
DDR1-279ENST00000515529 ACYP2P14621 99 aa11.79□□□□□ -0.52
DDR1-279ENST00000515529 KRTAP19-1Q8IUB9 90 aa11.75□□□□□ -0.53
DDR1-279ENST00000515529 CRIPTQ9P021 101 aa11.73□□□□□ -0.53
DDR1-279ENST00000515529 ADM2Q7Z4H4 148 aa11.72□□□□□ -0.53
DDR1-279ENST00000515529 SPRR2GQ9BYE4 73 aa11.69□□□□□ -0.54
DDR1-279ENST00000515529 SPANXA2-OT1Q8N9U9 137 aa11.64□□□□□ -0.55
DDR1-279ENST00000515529 CHKB-CPT1BH3BT56 60 aa11.63□□□□□ -0.55
DDR1-279ENST00000515529 SPTSSBQ8NFR3 76 aa11.63□□□□□ -0.55
DDR1-279ENST00000515529 COX7CP15954 63 aa11.62□□□□□ -0.55
DDR1-279ENST00000515529 Q5VV11 94 aa11.61□□□□□ -0.55
DDR1-279ENST00000515529 KRTAP19-6Q3LI70 58 aa11.6□□□□□ -0.55
DDR1-279ENST00000515529 KRTAP19-8Q3LI54 63 aa11.55□□□□□ -0.56
DDR1-279ENST00000515529 FCGBPQ9Y6R7 5405 aaPredicted RBP11.51□□□□□ -0.57
DDR1-279ENST00000515529 MT1BP07438 61 aa11.48□□□□□ -0.57
DDR1-279ENST00000515529 ANAPC13Q9BS18 74 aa11.46□□□□□ -0.57
DDR1-279ENST00000515529 P0C880 135 aa11.45□□□□□ -0.58
DDR1-279ENST00000515529 R4GN34 69 aa11.42□□□□□ -0.58
DDR1-279ENST00000515529 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.38□□□□□ -0.59
DDR1-279ENST00000515529 KRTAP3-2Q9BYR7 98 aa11.37□□□□□ -0.59
DDR1-279ENST00000515529 M0QZ58 72 aa11.34□□□□□ -0.59
DDR1-279ENST00000515529 H7BZZ5 65 aa11.33□□□□□ -0.6
DDR1-279ENST00000515529 COA5Q86WW8 74 aa11.32□□□□□ -0.6
DDR1-279ENST00000515529 A6NN06 94 aa11.3□□□□□ -0.6
DDR1-279ENST00000515529 CYSTM1Q9H1C7 97 aa11.3□□□□□ -0.6
DDR1-279ENST00000515529 KRTAP9-7A8MTY7 169 aa11.24□□□□□ -0.61
DDR1-279ENST00000515529 PLAC4Q8WY50 150 aa11.19□□□□□ -0.62
DDR1-279ENST00000515529 KRTAP10-5P60370 271 aa11.17□□□□□ -0.62
DDR1-279ENST00000515529 LINC01554Q52M75 96 aa11.17□□□□□ -0.62
DDR1-279ENST00000515529 CCDC179H3BU77 68 aa11.16□□□□□ -0.62
DDR1-279ENST00000515529 MACF1Q9UPN3 7388 aaKnown RBP11.12□□□□□ -0.63
DDR1-279ENST00000515529 SEC61GP60059 68 aa11.07□□□□□ -0.64
DDR1-279ENST00000515529 SERP1Q9Y6X1 66 aa11.02□□□□□ -0.65
DDR1-279ENST00000515529 PRO2289Q9P1D8 64 aa11.01□□□□□ -0.65
DDR1-279ENST00000515529 ATP5EP56381 51 aaPredicted RBP10.98□□□□□ -0.65
DDR1-279ENST00000515529 SYNE2Q8WXH0 6885 aaKnown RBP10.91□□□□□ -0.66
DDR1-279ENST00000515529 MT1XP80297 61 aa10.87□□□□□ -0.67
DDR1-279ENST00000515529 KRTAP13-4Q3LI77 160 aa10.82□□□□□ -0.68
DDR1-279ENST00000515529 TMEM258P61165 79 aa10.81□□□□□ -0.68
DDR1-279ENST00000515529 KRTAP6-3Q3LI67 103 aa10.78□□□□□ -0.68
DDR1-279ENST00000515529 A0A1B0GU69 56 aa10.77□□□□□ -0.69
DDR1-279ENST00000515529 A0A1B0GU33 70 aa10.76□□□□□ -0.69
DDR1-279ENST00000515529 A0A0D9SG42 100 aa10.65□□□□□ -0.7
DDR1-279ENST00000515529 SPATA8Q6RVD6 105 aa10.65□□□□□ -0.7
DDR1-279ENST00000515529 PRR15LQ9BU68 103 aa10.61□□□□□ -0.71
DDR1-279ENST00000515529 CAMK2N1Q7Z7J9 78 aa10.6□□□□□ -0.71
DDR1-279ENST00000515529 KRTAP12-2P59991 146 aa10.55□□□□□ -0.72
DDR1-279ENST00000515529 LINC01558Q9Y6Z2 57 aa10.5□□□□□ -0.73
DDR1-279ENST00000515529 SMIM26A0A096LP01 95 aa10.49□□□□□ -0.73
DDR1-279ENST00000515529 SPINT4Q6UDR6 99 aa10.49□□□□□ -0.73
DDR1-279ENST00000515529 KRTAP5-9P26371 169 aa10.41□□□□□ -0.74
DDR1-279ENST00000515529 KRTAP10-7P60409 375 aaPredicted RBP10.39□□□□□ -0.75
DDR1-279ENST00000515529 KRTAP8-1Q8IUC2 63 aa10.39□□□□□ -0.75
DDR1-279ENST00000515529 KRTAP12-1P59990 96 aa10.37□□□□□ -0.75
DDR1-279ENST00000515529 KMT2DO14686 5537 aa10.35□□□□□ -0.75
DDR1-279ENST00000515529 A8MU10 97 aa10.33□□□□□ -0.76
DDR1-279ENST00000515529 KRTAP10-12P60413 245 aa10.33□□□□□ -0.76
DDR1-279ENST00000515529 SPRR2FQ96RM1 72 aa10.28□□□□□ -0.76
DDR1-279ENST00000515529 MUC12Q9UKN1 5478 aa10.26□□□□□ -0.77
DDR1-279ENST00000515529 KRTAP4-8A0A0G2JLE6 195 aa10.26□□□□□ -0.77
DDR1-279ENST00000515529 KRTAP4-8Q9BYQ9 185 aa10.26□□□□□ -0.77
DDR1-279ENST00000515529 NEBP20929 6669 aa10.24□□□□□ -0.77
DDR1-279ENST00000515529 UQCR11O14957 56 aa10.22□□□□□ -0.77
DDR1-279ENST00000515529 V9GYY9 64 aa10.2□□□□□ -0.78
DDR1-279ENST00000515529 PCP4P48539 62 aa10.17□□□□□ -0.78
DDR1-279ENST00000515529 Q1T7F1 81 aa10.07□□□□□ -0.8
DDR1-279ENST00000515529 MDN1Q9NU22 5596 aa10.06□□□□□ -0.8
DDR1-279ENST00000515529 PSPHP1O15172 72 aa10.04□□□□□ -0.8
DDR1-279ENST00000515529 SPRR2EP22531 72 aa10.04□□□□□ -0.8
DDR1-279ENST00000515529 SPRR2BP35325 72 aa10.04□□□□□ -0.8
DDR1-279ENST00000515529 SPRR2AP35326 72 aa10.04□□□□□ -0.8
DDR1-279ENST00000515529 MIR22HGQ0VDD5 57 aa10.02□□□□□ -0.81
DDR1-279ENST00000515529 RPS28P62857 69 aaKnown RBP9.89□□□□□ -0.83
DDR1-279ENST00000515529 LCE1AQ5T7P2 110 aa9.89□□□□□ -0.83
DDR1-279ENST00000515529 KRTAP20-1Q3LI63 56 aa9.88□□□□□ -0.83
DDR1-279ENST00000515529 C10orf95Q9H7T3 257 aa9.86□□□□□ -0.83
DDR1-279ENST00000515529 TNP1P09430 55 aa9.85□□□□□ -0.83
DDR1-279ENST00000515529 K7ERS5 55 aa9.84□□□□□ -0.83
DDR1-279ENST00000515529 A6NED7 52 aa9.77□□□□□ -0.85
DDR1-279ENST00000515529 SPRR2DP22532 72 aa9.71□□□□□ -0.86
DDR1-279ENST00000515529 KRTAP19-7Q3SYF9 63 aa9.69□□□□□ -0.86
DDR1-279ENST00000515529 KRTAP2-3P0C7H8 128 aa9.67□□□□□ -0.86
DDR1-279ENST00000515529 KRTAP2-4Q9BYR9 128 aa9.67□□□□□ -0.86
DDR1-279ENST00000515529 MT1EP04732 61 aa9.62□□□□□ -0.87
DDR1-279ENST00000515529 KRTAP19-5Q3LI72 72 aa9.61□□□□□ -0.87
DDR1-279ENST00000515529 LCE3AQ5TA76 89 aa9.59□□□□□ -0.87
DDR1-279ENST00000515529 KRTAP25-1Q3LHN0 102 aa9.48□□□□□ -0.89
DDR1-279ENST00000515529 KRTAP19-3Q7Z4W3 81 aa9.47□□□□□ -0.89
DDR1-279ENST00000515529 LCE5AQ5TCM9 118 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms