RNA–Protein interactions for RNA: ENST00000515066.6

AP3S1-208, Transcript of adaptor related protein complex 3 subunit sigma 1, humanhuman

TSL 2

Gene AP3S1, Length 1,670 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1-208ENST00000515066 H1FX-AS1Q4G0G2 97 aa8.32□□□□□ -1.08
AP3S1-208ENST00000515066 A8MUN3 132 aa8.31□□□□□ -1.08
AP3S1-208ENST00000515066 MT1HP80294 61 aa8.24□□□□□ -1.09
AP3S1-208ENST00000515066 TMEM258P61165 79 aa8.23□□□□□ -1.09
AP3S1-208ENST00000515066 ACYP2P14621 99 aa8.21□□□□□ -1.09
AP3S1-208ENST00000515066 LCA10Q71F78 164 aa8.19□□□□□ -1.1
AP3S1-208ENST00000515066 S4R3F8 94 aa8.19□□□□□ -1.1
AP3S1-208ENST00000515066 ATP5EP56381 51 aaPredicted RBP8.17□□□□□ -1.1
AP3S1-208ENST00000515066 COA5Q86WW8 74 aa8.12□□□□□ -1.11
AP3S1-208ENST00000515066 M0R2T5 61 aa8.06□□□□□ -1.12
AP3S1-208ENST00000515066 CHKB-CPT1BH3BT56 60 aa8.05□□□□□ -1.12
AP3S1-208ENST00000515066 CSAG1Q6PB30 78 aa8.02□□□□□ -1.13
AP3S1-208ENST00000515066 KRTAP10-6P60371 365 aaPredicted RBP7.98□□□□□ -1.13
AP3S1-208ENST00000515066 SERP1Q9Y6X1 66 aa7.97□□□□□ -1.13
AP3S1-208ENST00000515066 SPTSSBQ8NFR3 76 aa7.93□□□□□ -1.14
AP3S1-208ENST00000515066 KRTAP9-8Q9BYQ0 159 aa7.92□□□□□ -1.14
AP3S1-208ENST00000515066 H0YAA0 97 aa7.86□□□□□ -1.15
AP3S1-208ENST00000515066 MT2AP02795 61 aa7.85□□□□□ -1.15
AP3S1-208ENST00000515066 RPS28P62857 69 aaKnown RBP7.82□□□□□ -1.16
AP3S1-208ENST00000515066 MT1FP04733 61 aa7.81□□□□□ -1.16
AP3S1-208ENST00000515066 ADM2Q7Z4H4 148 aa7.79□□□□□ -1.16
AP3S1-208ENST00000515066 P0C880 135 aa7.75□□□□□ -1.17
AP3S1-208ENST00000515066 KRTAP10-10P60014 251 aa7.73□□□□□ -1.17
AP3S1-208ENST00000515066 SMIM26A0A096LP01 95 aa7.7□□□□□ -1.18
AP3S1-208ENST00000515066 LINC01558Q9Y6Z2 57 aa7.7□□□□□ -1.18
AP3S1-208ENST00000515066 A0A1B0GU69 56 aa7.65□□□□□ -1.18
AP3S1-208ENST00000515066 Q1T7F1 81 aa7.65□□□□□ -1.18
AP3S1-208ENST00000515066 SEC61GP60059 68 aa7.64□□□□□ -1.19
AP3S1-208ENST00000515066 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
AP3S1-208ENST00000515066 V9GYY9 64 aa7.59□□□□□ -1.19
AP3S1-208ENST00000515066 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
AP3S1-208ENST00000515066 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
AP3S1-208ENST00000515066 PRR15LQ9BU68 103 aa7.57□□□□□ -1.2
AP3S1-208ENST00000515066 SPRR2GQ9BYE4 73 aa7.55□□□□□ -1.2
AP3S1-208ENST00000515066 PSPHP1O15172 72 aa7.53□□□□□ -1.2
AP3S1-208ENST00000515066 KRTAP13-4Q3LI77 160 aa7.53□□□□□ -1.2
AP3S1-208ENST00000515066 R4GN34 69 aa7.53□□□□□ -1.2
AP3S1-208ENST00000515066 A0A1B0GU33 70 aa7.51□□□□□ -1.21
AP3S1-208ENST00000515066 M0QZ58 72 aa7.51□□□□□ -1.21
AP3S1-208ENST00000515066 Q5VV11 94 aa7.49□□□□□ -1.21
AP3S1-208ENST00000515066 LOC100996750A0A140TA64 210 aa7.48□□□□□ -1.21
AP3S1-208ENST00000515066 KRTAP4-6Q9BYQ5 205 aa7.48□□□□□ -1.21
AP3S1-208ENST00000515066 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
AP3S1-208ENST00000515066 KRTAP19-8Q3LI54 63 aa7.4□□□□□ -1.23
AP3S1-208ENST00000515066 UQCR11O14957 56 aa7.37□□□□□ -1.23
AP3S1-208ENST00000515066 LINC01554Q52M75 96 aa7.37□□□□□ -1.23
AP3S1-208ENST00000515066 USH2AO75445 5202 aa7.34□□□□□ -1.23
AP3S1-208ENST00000515066 MT1BP07438 61 aa7.34□□□□□ -1.23
AP3S1-208ENST00000515066 KRTAP9-2Q9BYQ4 174 aa7.34□□□□□ -1.23
AP3S1-208ENST00000515066 A0A0D9SG42 100 aa7.3□□□□□ -1.24
AP3S1-208ENST00000515066 A8MU10 97 aa7.3□□□□□ -1.24
AP3S1-208ENST00000515066 A6NED7 52 aa7.27□□□□□ -1.25
AP3S1-208ENST00000515066 MIR22HGQ0VDD5 57 aa7.26□□□□□ -1.25
AP3S1-208ENST00000515066 A6NN06 94 aa7.25□□□□□ -1.25
AP3S1-208ENST00000515066 FSIP2Q5CZC0 6907 aa7.23□□□□□ -1.25
AP3S1-208ENST00000515066 KRTAP12-1P59990 96 aa7.2□□□□□ -1.26
AP3S1-208ENST00000515066 SSPOA2VEC9 5147 aa7.18□□□□□ -1.26
AP3S1-208ENST00000515066 KRTAP12-2P59991 146 aa7.17□□□□□ -1.26
AP3S1-208ENST00000515066 PLAC4Q8WY50 150 aa7.16□□□□□ -1.26
AP3S1-208ENST00000515066 SPINT4Q6UDR6 99 aa7.12□□□□□ -1.27
AP3S1-208ENST00000515066 CDC42SE1Q9NRR8 79 aa7.12□□□□□ -1.27
AP3S1-208ENST00000515066 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
AP3S1-208ENST00000515066 MT1XP80297 61 aa7.04□□□□□ -1.28
AP3S1-208ENST00000515066 H3BS24 57 aa7.02□□□□□ -1.29
AP3S1-208ENST00000515066 CRCT1Q9UGL9 99 aa7.02□□□□□ -1.29
AP3S1-208ENST00000515066 KRTAP10-5P60370 271 aa7.01□□□□□ -1.29
AP3S1-208ENST00000515066 CAMK2N1Q7Z7J9 78 aa7□□□□□ -1.29
AP3S1-208ENST00000515066 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
AP3S1-208ENST00000515066 KRTAP4-8Q9BYQ9 185 aa6.99□□□□□ -1.29
AP3S1-208ENST00000515066 K7ERS5 55 aa6.93□□□□□ -1.3
AP3S1-208ENST00000515066 PRO2289Q9P1D8 64 aa6.91□□□□□ -1.3
AP3S1-208ENST00000515066 FCGBPQ9Y6R7 5405 aaPredicted RBP6.91□□□□□ -1.3
AP3S1-208ENST00000515066 KRTAP9-6A0A140TA67 174 aa6.85□□□□□ -1.31
AP3S1-208ENST00000515066 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.85□□□□□ -1.31
AP3S1-208ENST00000515066 C10orf95Q9H7T3 257 aa6.84□□□□□ -1.32
AP3S1-208ENST00000515066 KRTAP4-12Q9BQ66 201 aa6.82□□□□□ -1.32
AP3S1-208ENST00000515066 KRTAP10-7P60409 375 aaPredicted RBP6.74□□□□□ -1.33
AP3S1-208ENST00000515066 PRO0628Q9UI54 55 aa6.69□□□□□ -1.34
AP3S1-208ENST00000515066 KRTAP10-12P60413 245 aa6.67□□□□□ -1.34
AP3S1-208ENST00000515066 ROMO1P60602 79 aa6.65□□□□□ -1.34
AP3S1-208ENST00000515066 LCE3BQ5TA77 95 aa6.65□□□□□ -1.34
AP3S1-208ENST00000515066 KMT2DO14686 5537 aa6.63□□□□□ -1.35
AP3S1-208ENST00000515066 TNP1P09430 55 aa6.62□□□□□ -1.35
AP3S1-208ENST00000515066 PMAIP1Q13794 54 aa6.59□□□□□ -1.35
AP3S1-208ENST00000515066 MACF1Q9UPN3 7388 aaKnown RBP6.58□□□□□ -1.36
AP3S1-208ENST00000515066 KRTAP25-1Q3LHN0 102 aa6.56□□□□□ -1.36
AP3S1-208ENST00000515066 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
AP3S1-208ENST00000515066 KRTAP9-9Q9BYP9 154 aa6.53□□□□□ -1.36
AP3S1-208ENST00000515066 KRTAP9-4Q9BYQ2 154 aa6.53□□□□□ -1.36
AP3S1-208ENST00000515066 LCE3AQ5TA76 89 aa6.45□□□□□ -1.38
AP3S1-208ENST00000515066 KRTAP8-1Q8IUC2 63 aa6.39□□□□□ -1.39
AP3S1-208ENST00000515066 KRTAP19-4Q3LI73 84 aa6.39□□□□□ -1.39
AP3S1-208ENST00000515066 LCE4AQ5TA78 99 aa6.39□□□□□ -1.39
AP3S1-208ENST00000515066 SYNE2Q8WXH0 6885 aaKnown RBP6.38□□□□□ -1.39
AP3S1-208ENST00000515066 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
AP3S1-208ENST00000515066 KRTAP5-9P26371 169 aa6.3□□□□□ -1.4
AP3S1-208ENST00000515066 KRTAP9-7A8MTY7 169 aa6.29□□□□□ -1.4
AP3S1-208ENST00000515066 KRTAP19-7Q3SYF9 63 aa6.29□□□□□ -1.4
AP3S1-208ENST00000515066 KRTAP6-3Q3LI67 103 aa6.27□□□□□ -1.41
AP3S1-208ENST00000515066 KRTAP19-5Q3LI72 72 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 144.3 ms