RNA–Protein interactions for RNA: ENST00000514033.1

KLF3-203, Transcript of Kruppel like factor 3, humanhuman

TSL 1 (best) BASIC

Gene KLF3, Length 1,871 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLF3-203ENST00000514033 SEC61GP60059 68 aa11.6□□□□□ -0.55
KLF3-203ENST00000514033 HERC1Q15751 4861 aa11.58□□□□□ -0.56
KLF3-203ENST00000514033 J3QL48 77 aa11.51□□□□□ -0.57
KLF3-203ENST00000514033 A0A1B0GU69 56 aa11.49□□□□□ -0.57
KLF3-203ENST00000514033 TPRXLQ17RH7 258 aa11.47□□□□□ -0.57
KLF3-203ENST00000514033 KRTAP3-1Q9BYR8 98 aa11.46□□□□□ -0.58
KLF3-203ENST00000514033 COX6B2Q6YFQ2 88 aa11.41□□□□□ -0.58
KLF3-203ENST00000514033 SPATA8Q6RVD6 105 aa11.37□□□□□ -0.59
KLF3-203ENST00000514033 UQCR11O14957 56 aa11.34□□□□□ -0.59
KLF3-203ENST00000514033 HMCN2Q8NDA2 5059 aa11.29□□□□□ -0.6
KLF3-203ENST00000514033 RBM12B-AS1Q9P1G2 102 aa11.27□□□□□ -0.61
KLF3-203ENST00000514033 MIR22HGQ0VDD5 57 aa11.26□□□□□ -0.61
KLF3-203ENST00000514033 LRP2P98164 4655 aa11.19□□□□□ -0.62
KLF3-203ENST00000514033 LPAP08519 4548 aa11.19□□□□□ -0.62
KLF3-203ENST00000514033 SEC61BP60468 96 aaKnown RBP11.07□□□□□ -0.64
KLF3-203ENST00000514033 S4R3F8 94 aa11.04□□□□□ -0.64
KLF3-203ENST00000514033 H1FX-AS1Q4G0G2 97 aa11.02□□□□□ -0.64
KLF3-203ENST00000514033 KRTAP3-3Q9BYR6 98 aa11.02□□□□□ -0.64
KLF3-203ENST00000514033 UBR4Q5T4S7 5183 aa10.92□□□□□ -0.66
KLF3-203ENST00000514033 PRAC1Q96KF2 57 aa10.9□□□□□ -0.66
KLF3-203ENST00000514033 ADM2Q7Z4H4 148 aa10.85□□□□□ -0.67
KLF3-203ENST00000514033 KRTAP4-1Q9BYQ7 146 aa10.85□□□□□ -0.67
KLF3-203ENST00000514033 A0A1B0GU33 70 aa10.84□□□□□ -0.67
KLF3-203ENST00000514033 MUC17Q685J3 4493 aa10.83□□□□□ -0.68
KLF3-203ENST00000514033 H0YAA0 97 aa10.81□□□□□ -0.68
KLF3-203ENST00000514033 LINC01554Q52M75 96 aa10.76□□□□□ -0.69
KLF3-203ENST00000514033 KRTAP10-6P60371 365 aaPredicted RBP10.74□□□□□ -0.69
KLF3-203ENST00000514033 CSAG1Q6PB30 78 aa10.73□□□□□ -0.69
KLF3-203ENST00000514033 KRTAP3-2Q9BYR7 98 aa10.73□□□□□ -0.69
KLF3-203ENST00000514033 RNF213Q63HN8 5207 aa10.66□□□□□ -0.7
KLF3-203ENST00000514033 K7ERS5 55 aa10.63□□□□□ -0.71
KLF3-203ENST00000514033 MUC2Q02817 5179 aa10.61□□□□□ -0.71
KLF3-203ENST00000514033 P0C880 135 aa10.61□□□□□ -0.71
KLF3-203ENST00000514033 KRTAP19-2Q3LHN2 52 aa10.61□□□□□ -0.71
KLF3-203ENST00000514033 KRTAP13-4Q3LI77 160 aa10.51□□□□□ -0.73
KLF3-203ENST00000514033 KRTAP25-1Q3LHN0 102 aa10.47□□□□□ -0.73
KLF3-203ENST00000514033 A0A0D9SG42 100 aa10.36□□□□□ -0.75
KLF3-203ENST00000514033 M0QZ58 72 aa10.33□□□□□ -0.76
KLF3-203ENST00000514033 ROMO1P60602 79 aa10.31□□□□□ -0.76
KLF3-203ENST00000514033 FLGP20930 4061 aaPredicted RBP10.28□□□□□ -0.76
KLF3-203ENST00000514033 FAT4Q6V0I7 4981 aa10.23□□□□□ -0.77
KLF3-203ENST00000514033 LCE2CQ5TA81 110 aa10.21□□□□□ -0.77
KLF3-203ENST00000514033 R4GN34 69 aa10.18□□□□□ -0.78
KLF3-203ENST00000514033 LORP23490 312 aaPredicted RBP10.15□□□□□ -0.78
KLF3-203ENST00000514033 KRTAP12-1P59990 96 aa10.13□□□□□ -0.79
KLF3-203ENST00000514033 KRTAP12-2P59991 146 aa10.13□□□□□ -0.79
KLF3-203ENST00000514033 SPINT4Q6UDR6 99 aa10.08□□□□□ -0.8
KLF3-203ENST00000514033 CRIPTQ9P021 101 aa10.02□□□□□ -0.8
KLF3-203ENST00000514033 MT1HP80294 61 aa9.98□□□□□ -0.81
KLF3-203ENST00000514033 M0R2T5 61 aa9.92□□□□□ -0.82
KLF3-203ENST00000514033 LCE2AQ5TA79 106 aaPredicted RBP9.85□□□□□ -0.83
KLF3-203ENST00000514033 H3BS24 57 aa9.75□□□□□ -0.85
KLF3-203ENST00000514033 C10orf95Q9H7T3 257 aa9.72□□□□□ -0.85
KLF3-203ENST00000514033 MT2AP02795 61 aa9.68□□□□□ -0.86
KLF3-203ENST00000514033 KRTAP9-8Q9BYQ0 159 aa9.66□□□□□ -0.86
KLF3-203ENST00000514033 SPRR2GQ9BYE4 73 aa9.65□□□□□ -0.86
KLF3-203ENST00000514033 MT1FP04733 61 aa9.64□□□□□ -0.87
KLF3-203ENST00000514033 KRTAP10-10P60014 251 aa9.62□□□□□ -0.87
KLF3-203ENST00000514033 KRTAP19-1Q8IUB9 90 aa9.6□□□□□ -0.87
KLF3-203ENST00000514033 CAMK2N1Q7Z7J9 78 aa9.59□□□□□ -0.87
KLF3-203ENST00000514033 KRTAP15-1Q3LI76 137 aa9.53□□□□□ -0.88
KLF3-203ENST00000514033 PLAC4Q8WY50 150 aa9.42□□□□□ -0.9
KLF3-203ENST00000514033 KRTAP19-8Q3LI54 63 aa9.34□□□□□ -0.91
KLF3-203ENST00000514033 KRTAP9-3Q9BYQ3 159 aa9.3□□□□□ -0.92
KLF3-203ENST00000514033 PP632Q6XCG6 107 aa9.25□□□□□ -0.93
KLF3-203ENST00000514033 NDUFAF8A1L188 74 aa9.23□□□□□ -0.93
KLF3-203ENST00000514033 LCE2DQ5TA82 110 aaPredicted RBP9.23□□□□□ -0.93
KLF3-203ENST00000514033 MT1BP07438 61 aa9.2□□□□□ -0.94
KLF3-203ENST00000514033 TNP1P09430 55 aa9.18□□□□□ -0.94
KLF3-203ENST00000514033 KRTAP9-2Q9BYQ4 174 aa9.1□□□□□ -0.95
KLF3-203ENST00000514033 FSIP2Q5CZC0 6907 aa9□□□□□ -0.97
KLF3-203ENST00000514033 KRTAP23-1A1A580 65 aa8.99□□□□□ -0.97
KLF3-203ENST00000514033 KRTAP10-5P60370 271 aa8.99□□□□□ -0.97
KLF3-203ENST00000514033 MT1XP80297 61 aa8.99□□□□□ -0.97
KLF3-203ENST00000514033 USH2AO75445 5202 aa8.99□□□□□ -0.97
KLF3-203ENST00000514033 LCE2BO14633 110 aa8.98□□□□□ -0.97
KLF3-203ENST00000514033 SSPOA2VEC9 5147 aa8.83□□□□□ -1
KLF3-203ENST00000514033 PRO2289Q9P1D8 64 aa8.81□□□□□ -1
KLF3-203ENST00000514033 LUZP6Q538Z0 58 aa8.79□□□□□ -1
KLF3-203ENST00000514033 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
KLF3-203ENST00000514033 KRTAP10-7P60409 375 aaPredicted RBP8.66□□□□□ -1.02
KLF3-203ENST00000514033 CRCT1Q9UGL9 99 aa8.66□□□□□ -1.02
KLF3-203ENST00000514033 KRTAP10-12P60413 245 aa8.64□□□□□ -1.03
KLF3-203ENST00000514033 KRTAP9-6A0A140TA67 174 aa8.59□□□□□ -1.03
KLF3-203ENST00000514033 KRTAP8-1Q8IUC2 63 aa8.57□□□□□ -1.04
KLF3-203ENST00000514033 SPRR5A0A1B0GTR4 108 aa8.56□□□□□ -1.04
KLF3-203ENST00000514033 FCGBPQ9Y6R7 5405 aaPredicted RBP8.48□□□□□ -1.05
KLF3-203ENST00000514033 KRTAP19-6Q3LI70 58 aa8.47□□□□□ -1.05
KLF3-203ENST00000514033 A0A0A0MQY5 61 aa8.4□□□□□ -1.07
KLF3-203ENST00000514033 KRTAP12-3P60328 96 aa8.38□□□□□ -1.07
KLF3-203ENST00000514033 KRTAP4-8A0A0G2JLE6 195 aa8.23□□□□□ -1.09
KLF3-203ENST00000514033 KRTAP4-8Q9BYQ9 185 aa8.23□□□□□ -1.09
KLF3-203ENST00000514033 KRTAP19-5Q3LI72 72 aa8.21□□□□□ -1.09
KLF3-203ENST00000514033 MACF1Q9UPN3 7388 aaKnown RBP8.17□□□□□ -1.1
KLF3-203ENST00000514033 KMT2DO14686 5537 aa8.13□□□□□ -1.11
KLF3-203ENST00000514033 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.06□□□□□ -1.12
KLF3-203ENST00000514033 SYNE2Q8WXH0 6885 aaKnown RBP8.02□□□□□ -1.13
KLF3-203ENST00000514033 KRTAP19-7Q3SYF9 63 aa8.01□□□□□ -1.13
KLF3-203ENST00000514033 LCE3CQ5T5A8 94 aa7.85□□□□□ -1.15
KLF3-203ENST00000514033 MT1EP04732 61 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms