RNA–Protein interactions for RNA: ENST00000513873.1

CLDND1-228, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 538 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-228ENST00000513873 H3BPC8 53 aa2.54□□□□□ -2
CLDND1-228ENST00000513873 K7EQZ3 153 aa2.54□□□□□ -2
CLDND1-228ENST00000513873 MP68P56378 58 aa2.54□□□□□ -2
CLDND1-228ENST00000513873 CRCT1Q9UGL9 99 aa2.54□□□□□ -2
CLDND1-228ENST00000513873 FAT3Q8TDW7 4589 aa2.53□□□□□ -2
CLDND1-228ENST00000513873 IGHV6-1A0A0B4J1U7 121 aa2.53□□□□□ -2
CLDND1-228ENST00000513873 DEFB116Q30KQ4 102 aa2.53□□□□□ -2
CLDND1-228ENST00000513873 TNXBP22105 4242 aa2.53□□□□□ -2.01
CLDND1-228ENST00000513873 A0A0U1RQV1 116 aa2.52□□□□□ -2.01
CLDND1-228ENST00000513873 LINC00313P59037 77 aa2.52□□□□□ -2.01
CLDND1-228ENST00000513873 KRTAP13-2Q52LG2 175 aa2.52□□□□□ -2.01
CLDND1-228ENST00000513873 TMEM254Q8TBM7 123 aa2.52□□□□□ -2.01
CLDND1-228ENST00000513873 C8orf17Q9NRJ1 99 aa2.52□□□□□ -2.01
CLDND1-228ENST00000513873 NDUFS5O43920 106 aa2.51□□□□□ -2.01
CLDND1-228ENST00000513873 WFDC13Q8IUB5 93 aa2.51□□□□□ -2.01
CLDND1-228ENST00000513873 MRPL34Q9BQ48 92 aaKnown RBP2.51□□□□□ -2.01
CLDND1-228ENST00000513873 FSIP2Q5CZC0 6907 aa2.5□□□□□ -2.01
CLDND1-228ENST00000513873 ATP5EP56381 51 aaPredicted RBP2.5□□□□□ -2.01
CLDND1-228ENST00000513873 TMEM258P61165 79 aa2.5□□□□□ -2.01
CLDND1-228ENST00000513873 C1orf195Q5TG92 126 aa2.5□□□□□ -2.01
CLDND1-228ENST00000513873 C20orf197Q8N268 126 aa2.5□□□□□ -2.01
CLDND1-228ENST00000513873 Q96NJ1 140 aa2.5□□□□□ -2.01
CLDND1-228ENST00000513873 MMP24-AS1A0A0U1RRL7 71 aa2.49□□□□□ -2.01
CLDND1-228ENST00000513873 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
CLDND1-228ENST00000513873 KLKP1Q107X0 134 aa2.49□□□□□ -2.01
CLDND1-228ENST00000513873 TRAV22A0A0B4J277 110 aa2.48□□□□□ -2.01
CLDND1-228ENST00000513873 H0Y9P7 68 aa2.48□□□□□ -2.01
CLDND1-228ENST00000513873 KRTAP10-4P60372 401 aaPredicted RBP2.48□□□□□ -2.01
CLDND1-228ENST00000513873 FP248Q71RG6 208 aaPredicted RBP2.48□□□□□ -2.01
CLDND1-228ENST00000513873 MT1HL1P0DM35 61 aa2.47□□□□□ -2.01
CLDND1-228ENST00000513873 LOC101927531A0A1B0GV80 90 aa2.46□□□□□ -2.02
CLDND1-228ENST00000513873 C1orf64Q8NEQ6 169 aa2.46□□□□□ -2.02
CLDND1-228ENST00000513873 LINC00208Q96KT6 92 aa2.46□□□□□ -2.02
CLDND1-228ENST00000513873 SNURFQ9Y675 71 aa2.45□□□□□ -2.02
CLDND1-228ENST00000513873 FAM236DA0A1B0GTK5 79 aa2.44□□□□□ -2.02
CLDND1-228ENST00000513873 FAM236CP0DP71 79 aa2.44□□□□□ -2.02
CLDND1-228ENST00000513873 RPS28P62857 69 aaKnown RBP2.44□□□□□ -2.02
CLDND1-228ENST00000513873 DNAH8Q96JB1 4490 aa2.43□□□□□ -2.02
CLDND1-228ENST00000513873 H7BZZ5 65 aa2.43□□□□□ -2.02
CLDND1-228ENST00000513873 SPANXA2-OT1Q8N9U9 137 aa2.43□□□□□ -2.02
CLDND1-228ENST00000513873 ATP11AUNQ6ZP68 121 aa2.41□□□□□ -2.02
CLDND1-228ENST00000513873 ZCCHC13Q8WW36 166 aaKnown RBP2.41□□□□□ -2.02
CLDND1-228ENST00000513873 C20orf166-AS1Q96NR2 134 aa2.41□□□□□ -2.02
CLDND1-228ENST00000513873 SERP1Q9Y6X1 66 aa2.41□□□□□ -2.02
CLDND1-228ENST00000513873 C7orf65Q6ZTY9 151 aa2.4□□□□□ -2.03
CLDND1-228ENST00000513873 CAMK2N1Q7Z7J9 78 aa2.4□□□□□ -2.03
CLDND1-228ENST00000513873 A8MUU9 505 aa2.39□□□□□ -2.03
CLDND1-228ENST00000513873 CYP4F30PQ9H0H9 118 aa2.39□□□□□ -2.03
CLDND1-228ENST00000513873 LPAP08519 4548 aa2.39□□□□□ -2.03
CLDND1-228ENST00000513873 C9orf92A6NGG3 77 aa2.38□□□□□ -2.03
CLDND1-228ENST00000513873 A8MUN3 132 aa2.38□□□□□ -2.03
CLDND1-228ENST00000513873 ACYP2P14621 99 aa2.38□□□□□ -2.03
CLDND1-228ENST00000513873 PCOTHQ58A44 107 aa2.38□□□□□ -2.03
CLDND1-228ENST00000513873 Q5W150 140 aa2.38□□□□□ -2.03
CLDND1-228ENST00000513873 RETNLBQ9BQ08 111 aa2.38□□□□□ -2.03
CLDND1-228ENST00000513873 V9GYY9 64 aa2.38□□□□□ -2.03
CLDND1-228ENST00000513873 SMIM26A0A096LP01 95 aa2.37□□□□□ -2.03
CLDND1-228ENST00000513873 TPRXLQ17RH7 258 aa2.37□□□□□ -2.03
CLDND1-228ENST00000513873 SPTSSBQ8NFR3 76 aa2.37□□□□□ -2.03
CLDND1-228ENST00000513873 CHKB-CPT1BH3BT56 60 aa2.36□□□□□ -2.03
CLDND1-228ENST00000513873 CYSTM1Q9H1C7 97 aa2.36□□□□□ -2.03
CLDND1-228ENST00000513873 RPL37P61927 97 aaKnown RBP2.35□□□□□ -2.03
CLDND1-228ENST00000513873 HRES1P13985 223 aa2.34□□□□□ -2.03
CLDND1-228ENST00000513873 SPINK7P58062 85 aa2.34□□□□□ -2.03
CLDND1-228ENST00000513873 PP632Q6XCG6 107 aa2.33□□□□□ -2.04
CLDND1-228ENST00000513873 DMAC1Q96GE9 116 aa2.33□□□□□ -2.04
CLDND1-228ENST00000513873 COA5Q86WW8 74 aa2.32□□□□□ -2.04
CLDND1-228ENST00000513873 SEC61GP60059 68 aa2.31□□□□□ -2.04
CLDND1-228ENST00000513873 PRR15LQ9BU68 103 aa2.31□□□□□ -2.04
CLDND1-228ENST00000513873 LCE3DQ9BYE3 92 aa2.31□□□□□ -2.04
CLDND1-228ENST00000513873 RBM12B-AS1Q9P1G2 102 aa2.31□□□□□ -2.04
CLDND1-228ENST00000513873 Q1T7F1 81 aa2.29□□□□□ -2.04
CLDND1-228ENST00000513873 COX6B2Q6YFQ2 88 aa2.29□□□□□ -2.04
CLDND1-228ENST00000513873 C4orf26Q17RF5 130 aa2.28□□□□□ -2.04
CLDND1-228ENST00000513873 A0A1B0GU69 56 aa2.25□□□□□ -2.05
CLDND1-228ENST00000513873 H1FX-AS1Q4G0G2 97 aa2.25□□□□□ -2.05
CLDND1-228ENST00000513873 LINC01558Q9Y6Z2 57 aa2.25□□□□□ -2.05
CLDND1-228ENST00000513873 S4R3F8 94 aa2.23□□□□□ -2.05
CLDND1-228ENST00000513873 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
CLDND1-228ENST00000513873 SPRR5A0A1B0GTR4 108 aa2.22□□□□□ -2.05
CLDND1-228ENST00000513873 SYNE2Q8WXH0 6885 aaKnown RBP2.21□□□□□ -2.05
CLDND1-228ENST00000513873 A6NED7 52 aa2.21□□□□□ -2.06
CLDND1-228ENST00000513873 PSPHP1O15172 72 aa2.21□□□□□ -2.06
CLDND1-228ENST00000513873 KRTAP10-10P60014 251 aa2.21□□□□□ -2.06
CLDND1-228ENST00000513873 CSAG1Q6PB30 78 aa2.21□□□□□ -2.06
CLDND1-228ENST00000513873 FCGBPQ9Y6R7 5405 aaPredicted RBP2.2□□□□□ -2.06
CLDND1-228ENST00000513873 UQCR11O14957 56 aa2.2□□□□□ -2.06
CLDND1-228ENST00000513873 MUC17Q685J3 4493 aa2.18□□□□□ -2.06
CLDND1-228ENST00000513873 BRK1Q8WUW1 75 aa2.18□□□□□ -2.06
CLDND1-228ENST00000513873 Q5VV11 94 aa2.17□□□□□ -2.06
CLDND1-228ENST00000513873 LCA10Q71F78 164 aa2.17□□□□□ -2.06
CLDND1-228ENST00000513873 A0A1B0GU33 70 aa2.16□□□□□ -2.06
CLDND1-228ENST00000513873 K7ERS5 55 aa2.16□□□□□ -2.06
CLDND1-228ENST00000513873 PRO0628Q9UI54 55 aa2.16□□□□□ -2.06
CLDND1-228ENST00000513873 MACF1Q9UPN3 7388 aaKnown RBP2.15□□□□□ -2.06
CLDND1-228ENST00000513873 H0YAA0 97 aa2.15□□□□□ -2.07
CLDND1-228ENST00000513873 MIR22HGQ0VDD5 57 aa2.15□□□□□ -2.07
CLDND1-228ENST00000513873 CDC42SE1Q9NRR8 79 aa2.15□□□□□ -2.07
CLDND1-228ENST00000513873 MUC19Q7Z5P9 8384 aa2.14□□□□□ -2.07
CLDND1-228ENST00000513873 MT1HP80294 61 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms