RNA–Protein interactions for RNA: ENST00000512275.5

RFC1-213, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 841 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-213ENST00000512275 hDV103S1A0JD37 113 aa3.77□□□□□ -1.81
RFC1-213ENST00000512275 TMEM254Q8TBM7 123 aa3.76□□□□□ -1.81
RFC1-213ENST00000512275 KRTAP13-3Q3SY46 172 aa3.75□□□□□ -1.81
RFC1-213ENST00000512275 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
RFC1-213ENST00000512275 NDUFS5O43920 106 aa3.74□□□□□ -1.81
RFC1-213ENST00000512275 C5orf47Q569G3 176 aa3.74□□□□□ -1.81
RFC1-213ENST00000512275 SCGB1A1P11684 91 aa3.73□□□□□ -1.81
RFC1-213ENST00000512275 TPRXLQ17RH7 258 aa3.72□□□□□ -1.81
RFC1-213ENST00000512275 HERC1Q15751 4861 aa3.72□□□□□ -1.81
RFC1-213ENST00000512275 ATOX1O00244 68 aa3.71□□□□□ -1.82
RFC1-213ENST00000512275 LPAP08519 4548 aa3.7□□□□□ -1.82
RFC1-213ENST00000512275 A8MUU9 505 aa3.7□□□□□ -1.82
RFC1-213ENST00000512275 C20orf166-AS1Q96NR2 134 aa3.69□□□□□ -1.82
RFC1-213ENST00000512275 HMCN2Q8NDA2 5059 aa3.69□□□□□ -1.82
RFC1-213ENST00000512275 RPL37P61927 97 aaKnown RBP3.68□□□□□ -1.82
RFC1-213ENST00000512275 SPANXA2-OT1Q8N9U9 137 aa3.68□□□□□ -1.82
RFC1-213ENST00000512275 TRAV7A0A075B6U4 112 aa3.67□□□□□ -1.82
RFC1-213ENST00000512275 ANAPC13Q9BS18 74 aa3.67□□□□□ -1.82
RFC1-213ENST00000512275 H0Y9P7 68 aa3.66□□□□□ -1.82
RFC1-213ENST00000512275 UQCRQO14949 82 aa3.66□□□□□ -1.82
RFC1-213ENST00000512275 SMIM20Q8N5G0 67 aa3.66□□□□□ -1.82
RFC1-213ENST00000512275 ZCCHC13Q8WW36 166 aaKnown RBP3.66□□□□□ -1.82
RFC1-213ENST00000512275 TP53AIP1Q9HCN2 124 aa3.66□□□□□ -1.82
RFC1-213ENST00000512275 LRP2P98164 4655 aa3.66□□□□□ -1.82
RFC1-213ENST00000512275 TRAV22A0A0B4J277 110 aa3.65□□□□□ -1.83
RFC1-213ENST00000512275 SERP2Q8N6R1 65 aa3.65□□□□□ -1.83
RFC1-213ENST00000512275 PCOTHQ58A44 107 aa3.64□□□□□ -1.83
RFC1-213ENST00000512275 ATP11AUNQ6ZP68 121 aa3.64□□□□□ -1.83
RFC1-213ENST00000512275 LUZP6Q538Z0 58 aa3.63□□□□□ -1.83
RFC1-213ENST00000512275 PRO0628Q9UI54 55 aa3.63□□□□□ -1.83
RFC1-213ENST00000512275 COX7CP15954 63 aa3.62□□□□□ -1.83
RFC1-213ENST00000512275 MP68P56378 58 aa3.62□□□□□ -1.83
RFC1-213ENST00000512275 LINC00208Q96KT6 92 aa3.62□□□□□ -1.83
RFC1-213ENST00000512275 LCE3AQ5TA76 89 aa3.61□□□□□ -1.83
RFC1-213ENST00000512275 C20orf197Q8N268 126 aa3.61□□□□□ -1.83
RFC1-213ENST00000512275 SNURFQ9Y675 71 aa3.61□□□□□ -1.83
RFC1-213ENST00000512275 MUC17Q685J3 4493 aa3.61□□□□□ -1.83
RFC1-213ENST00000512275 CCDC179H3BU77 68 aa3.6□□□□□ -1.83
RFC1-213ENST00000512275 C1orf64Q8NEQ6 169 aa3.6□□□□□ -1.83
RFC1-213ENST00000512275 LOC101927531A0A1B0GV80 90 aa3.58□□□□□ -1.84
RFC1-213ENST00000512275 C7orf65Q6ZTY9 151 aa3.58□□□□□ -1.84
RFC1-213ENST00000512275 H3BPC8 53 aa3.57□□□□□ -1.84
RFC1-213ENST00000512275 SPINK7P58062 85 aa3.57□□□□□ -1.84
RFC1-213ENST00000512275 CYSTM1Q9H1C7 97 aa3.57□□□□□ -1.84
RFC1-213ENST00000512275 KLKP1Q107X0 134 aa3.56□□□□□ -1.84
RFC1-213ENST00000512275 KRTAP4-1Q9BYQ7 146 aa3.56□□□□□ -1.84
RFC1-213ENST00000512275 CYP4F30PQ9H0H9 118 aa3.56□□□□□ -1.84
RFC1-213ENST00000512275 HRES1P13985 223 aa3.53□□□□□ -1.84
RFC1-213ENST00000512275 RBM12B-AS1Q9P1G2 102 aa3.53□□□□□ -1.84
RFC1-213ENST00000512275 C4orf26Q17RF5 130 aa3.52□□□□□ -1.85
RFC1-213ENST00000512275 UBR4Q5T4S7 5183 aa3.52□□□□□ -1.85
RFC1-213ENST00000512275 RNF213Q63HN8 5207 aa3.52□□□□□ -1.85
RFC1-213ENST00000512275 H7BZZ5 65 aa3.5□□□□□ -1.85
RFC1-213ENST00000512275 NDUFC1O43677 76 aa3.49□□□□□ -1.85
RFC1-213ENST00000512275 SPRR5A0A1B0GTR4 108 aa3.48□□□□□ -1.85
RFC1-213ENST00000512275 FAM236DA0A1B0GTK5 79 aa3.47□□□□□ -1.85
RFC1-213ENST00000512275 FAM236CP0DP71 79 aa3.47□□□□□ -1.85
RFC1-213ENST00000512275 COX6B2Q6YFQ2 88 aa3.47□□□□□ -1.85
RFC1-213ENST00000512275 TMEM258P61165 79 aa3.44□□□□□ -1.86
RFC1-213ENST00000512275 SPINT4Q6UDR6 99 aa3.44□□□□□ -1.86
RFC1-213ENST00000512275 DMAC1Q96GE9 116 aa3.44□□□□□ -1.86
RFC1-213ENST00000512275 MUC2Q02817 5179 aa3.42□□□□□ -1.86
RFC1-213ENST00000512275 KRTAP19-2Q3LHN2 52 aa3.42□□□□□ -1.86
RFC1-213ENST00000512275 A8MUN3 132 aa3.41□□□□□ -1.86
RFC1-213ENST00000512275 ATP5EP56381 51 aaPredicted RBP3.41□□□□□ -1.86
RFC1-213ENST00000512275 H1FX-AS1Q4G0G2 97 aa3.4□□□□□ -1.87
RFC1-213ENST00000512275 ACYP2P14621 99 aa3.39□□□□□ -1.87
RFC1-213ENST00000512275 COA5Q86WW8 74 aa3.39□□□□□ -1.87
RFC1-213ENST00000512275 S4R3F8 94 aa3.38□□□□□ -1.87
RFC1-213ENST00000512275 CHKB-CPT1BH3BT56 60 aa3.37□□□□□ -1.87
RFC1-213ENST00000512275 LCA10Q71F78 164 aa3.36□□□□□ -1.87
RFC1-213ENST00000512275 FAT4Q6V0I7 4981 aa3.35□□□□□ -1.87
RFC1-213ENST00000512275 MT1HP80294 61 aa3.33□□□□□ -1.88
RFC1-213ENST00000512275 KRTAP5-5Q701N2 237 aaPredicted RBP3.33□□□□□ -1.88
RFC1-213ENST00000512275 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
RFC1-213ENST00000512275 SERP1Q9Y6X1 66 aa3.33□□□□□ -1.88
RFC1-213ENST00000512275 FLGP20930 4061 aaPredicted RBP3.33□□□□□ -1.88
RFC1-213ENST00000512275 K7ERS5 55 aa3.31□□□□□ -1.88
RFC1-213ENST00000512275 M0R2T5 61 aa3.31□□□□□ -1.88
RFC1-213ENST00000512275 ADM2Q7Z4H4 148 aa3.3□□□□□ -1.88
RFC1-213ENST00000512275 CSAG1Q6PB30 78 aa3.29□□□□□ -1.88
RFC1-213ENST00000512275 SPTSSBQ8NFR3 76 aa3.29□□□□□ -1.88
RFC1-213ENST00000512275 R4GN34 69 aa3.27□□□□□ -1.89
RFC1-213ENST00000512275 RPS28P62857 69 aaKnown RBP3.25□□□□□ -1.89
RFC1-213ENST00000512275 KRTAP10-10P60014 251 aa3.24□□□□□ -1.89
RFC1-213ENST00000512275 KRTAP25-1Q3LHN0 102 aa3.21□□□□□ -1.9
RFC1-213ENST00000512275 A0A1B0GU69 56 aa3.2□□□□□ -1.9
RFC1-213ENST00000512275 A6NED7 52 aa3.2□□□□□ -1.9
RFC1-213ENST00000512275 LINC01558Q9Y6Z2 57 aa3.2□□□□□ -1.9
RFC1-213ENST00000512275 MT2AP02795 61 aa3.19□□□□□ -1.9
RFC1-213ENST00000512275 P0C880 135 aa3.19□□□□□ -1.9
RFC1-213ENST00000512275 PRR15LQ9BU68 103 aa3.19□□□□□ -1.9
RFC1-213ENST00000512275 H0YAA0 97 aa3.18□□□□□ -1.9
RFC1-213ENST00000512275 Q1T7F1 81 aa3.18□□□□□ -1.9
RFC1-213ENST00000512275 MT1FP04733 61 aa3.17□□□□□ -1.9
RFC1-213ENST00000512275 A0A1B0GU33 70 aa3.16□□□□□ -1.9
RFC1-213ENST00000512275 LCE1CQ5T751 118 aa3.15□□□□□ -1.91
RFC1-213ENST00000512275 LCE1BQ5T7P3 118 aa3.15□□□□□ -1.91
RFC1-213ENST00000512275 KRTAP5-8O75690 187 aa3.14□□□□□ -1.91
RFC1-213ENST00000512275 Q5VV11 94 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms