RNA–Protein interactions for RNA: ENST00000512258.1

MSH3-202, Transcript of mutS homolog 3, humanhuman

TSL 3

Gene MSH3, Length 677 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-202ENST00000512258 Q75L30 129 aa2.69□□□□□ -1.98
MSH3-202ENST00000512258 TMEM254Q8TBM7 123 aa2.69□□□□□ -1.98
MSH3-202ENST00000512258 RNF213Q63HN8 5207 aa2.69□□□□□ -1.98
MSH3-202ENST00000512258 MUC17Q685J3 4493 aa2.68□□□□□ -1.98
MSH3-202ENST00000512258 HCG22E2RYF7 251 aa2.68□□□□□ -1.98
MSH3-202ENST00000512258 ATP5EP2Q5VTU8 51 aa2.68□□□□□ -1.98
MSH3-202ENST00000512258 MRPL34Q9BQ48 92 aaKnown RBP2.68□□□□□ -1.98
MSH3-202ENST00000512258 SEC61BP60468 96 aaKnown RBP2.67□□□□□ -1.98
MSH3-202ENST00000512258 NDUFS5O43920 106 aa2.66□□□□□ -1.98
MSH3-202ENST00000512258 Q5W150 140 aa2.66□□□□□ -1.98
MSH3-202ENST00000512258 ATP11AUNQ6ZP68 121 aa2.66□□□□□ -1.98
MSH3-202ENST00000512258 MUC2Q02817 5179 aa2.66□□□□□ -1.98
MSH3-202ENST00000512258 ZCCHC13Q8WW36 166 aaKnown RBP2.65□□□□□ -1.99
MSH3-202ENST00000512258 A8MU10 97 aa2.64□□□□□ -1.99
MSH3-202ENST00000512258 KRTAP19-2Q3LHN2 52 aa2.61□□□□□ -1.99
MSH3-202ENST00000512258 IMUPQ9GZP8 106 aa2.61□□□□□ -1.99
MSH3-202ENST00000512258 FAM236AA0A1B0GUQ0 79 aa2.6□□□□□ -1.99
MSH3-202ENST00000512258 FAM236BA0A1B0GV22 79 aa2.6□□□□□ -1.99
MSH3-202ENST00000512258 HRES1P13985 223 aa2.6□□□□□ -1.99
MSH3-202ENST00000512258 SPINK7P58062 85 aa2.6□□□□□ -1.99
MSH3-202ENST00000512258 OCR1Q9BZK8 76 aa2.6□□□□□ -1.99
MSH3-202ENST00000512258 TP53AIP1Q9HCN2 124 aa2.59□□□□□ -1.99
MSH3-202ENST00000512258 UQCRQO14949 82 aa2.58□□□□□ -2
MSH3-202ENST00000512258 SCGB1A1P11684 91 aa2.58□□□□□ -2
MSH3-202ENST00000512258 FAT4Q6V0I7 4981 aa2.57□□□□□ -2
MSH3-202ENST00000512258 TRAV22A0A0B4J277 110 aa2.57□□□□□ -2
MSH3-202ENST00000512258 H0Y9P7 68 aa2.57□□□□□ -2
MSH3-202ENST00000512258 C7orf65Q6ZTY9 151 aa2.56□□□□□ -2
MSH3-202ENST00000512258 NDUFAF8A1L188 74 aa2.55□□□□□ -2
MSH3-202ENST00000512258 C4orf26Q17RF5 130 aa2.55□□□□□ -2
MSH3-202ENST00000512258 LINC00208Q96KT6 92 aa2.55□□□□□ -2
MSH3-202ENST00000512258 CYP4F30PQ9H0H9 118 aa2.55□□□□□ -2
MSH3-202ENST00000512258 TRAV7A0A075B6U4 112 aa2.54□□□□□ -2
MSH3-202ENST00000512258 LOC101927531A0A1B0GV80 90 aa2.54□□□□□ -2
MSH3-202ENST00000512258 ATOX1O00244 68 aa2.54□□□□□ -2
MSH3-202ENST00000512258 KLKP1Q107X0 134 aa2.54□□□□□ -2
MSH3-202ENST00000512258 COX6B2Q6YFQ2 88 aa2.54□□□□□ -2
MSH3-202ENST00000512258 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
MSH3-202ENST00000512258 MUC19Q7Z5P9 8384 aa2.53□□□□□ -2
MSH3-202ENST00000512258 MT1HP80294 61 aa2.53□□□□□ -2
MSH3-202ENST00000512258 C5orf47Q569G3 176 aa2.53□□□□□ -2
MSH3-202ENST00000512258 FAM236DA0A1B0GTK5 79 aa2.52□□□□□ -2.01
MSH3-202ENST00000512258 FAM236CP0DP71 79 aa2.52□□□□□ -2.01
MSH3-202ENST00000512258 MP68P56378 58 aa2.52□□□□□ -2.01
MSH3-202ENST00000512258 KRTAP5-7Q6L8G8 165 aa2.52□□□□□ -2.01
MSH3-202ENST00000512258 SMIM20Q8N5G0 67 aa2.52□□□□□ -2.01
MSH3-202ENST00000512258 SERP2Q8N6R1 65 aa2.52□□□□□ -2.01
MSH3-202ENST00000512258 RBM12B-AS1Q9P1G2 102 aa2.52□□□□□ -2.01
MSH3-202ENST00000512258 A0A0U1RQV1 116 aa2.51□□□□□ -2.01
MSH3-202ENST00000512258 SNURFQ9Y675 71 aa2.51□□□□□ -2.01
MSH3-202ENST00000512258 FLGP20930 4061 aaPredicted RBP2.5□□□□□ -2.01
MSH3-202ENST00000512258 H3BPC8 53 aa2.5□□□□□ -2.01
MSH3-202ENST00000512258 C20orf197Q8N268 126 aa2.5□□□□□ -2.01
MSH3-202ENST00000512258 COX7CP15954 63 aa2.49□□□□□ -2.01
MSH3-202ENST00000512258 CYSTM1Q9H1C7 97 aa2.49□□□□□ -2.01
MSH3-202ENST00000512258 H1FX-AS1Q4G0G2 97 aa2.48□□□□□ -2.01
MSH3-202ENST00000512258 ANAPC13Q9BS18 74 aa2.48□□□□□ -2.01
MSH3-202ENST00000512258 CCDC179H3BU77 68 aa2.47□□□□□ -2.01
MSH3-202ENST00000512258 M0R2T5 61 aa2.47□□□□□ -2.01
MSH3-202ENST00000512258 LCA10Q71F78 164 aa2.44□□□□□ -2.02
MSH3-202ENST00000512258 DMAC1Q96GE9 116 aa2.44□□□□□ -2.02
MSH3-202ENST00000512258 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
MSH3-202ENST00000512258 S4R3F8 94 aa2.44□□□□□ -2.02
MSH3-202ENST00000512258 H7BZZ5 65 aa2.42□□□□□ -2.02
MSH3-202ENST00000512258 A8MUN3 132 aa2.41□□□□□ -2.02
MSH3-202ENST00000512258 MT2AP02795 61 aa2.4□□□□□ -2.03
MSH3-202ENST00000512258 MT1FP04733 61 aa2.4□□□□□ -2.03
MSH3-202ENST00000512258 PP632Q6XCG6 107 aa2.4□□□□□ -2.03
MSH3-202ENST00000512258 SPANXA2-OT1Q8N9U9 137 aa2.4□□□□□ -2.03
MSH3-202ENST00000512258 NDUFC1O43677 76 aa2.38□□□□□ -2.03
MSH3-202ENST00000512258 ACYP2P14621 99 aa2.38□□□□□ -2.03
MSH3-202ENST00000512258 CSAG1Q6PB30 78 aa2.38□□□□□ -2.03
MSH3-202ENST00000512258 KRTAP10-10P60014 251 aa2.36□□□□□ -2.03
MSH3-202ENST00000512258 COA5Q86WW8 74 aa2.36□□□□□ -2.03
MSH3-202ENST00000512258 CHKB-CPT1BH3BT56 60 aa2.35□□□□□ -2.03
MSH3-202ENST00000512258 P0C880 135 aa2.32□□□□□ -2.04
MSH3-202ENST00000512258 TMEM258P61165 79 aa2.32□□□□□ -2.04
MSH3-202ENST00000512258 ADM2Q7Z4H4 148 aa2.32□□□□□ -2.04
MSH3-202ENST00000512258 PRAC1Q96KF2 57 aa2.32□□□□□ -2.04
MSH3-202ENST00000512258 ATP5EP56381 51 aaPredicted RBP2.31□□□□□ -2.04
MSH3-202ENST00000512258 H0YAA0 97 aa2.3□□□□□ -2.04
MSH3-202ENST00000512258 SPTSSBQ8NFR3 76 aa2.3□□□□□ -2.04
MSH3-202ENST00000512258 USH2AO75445 5202 aa2.27□□□□□ -2.05
MSH3-202ENST00000512258 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
MSH3-202ENST00000512258 SERP1Q9Y6X1 66 aa2.26□□□□□ -2.05
MSH3-202ENST00000512258 MT1BP07438 61 aa2.24□□□□□ -2.05
MSH3-202ENST00000512258 KRTAP21-2Q3LI59 83 aa2.24□□□□□ -2.05
MSH3-202ENST00000512258 KRTAP13-4Q3LI77 160 aa2.24□□□□□ -2.05
MSH3-202ENST00000512258 M0QZ58 72 aa2.23□□□□□ -2.05
MSH3-202ENST00000512258 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
MSH3-202ENST00000512258 CRIPTQ9P021 101 aa2.23□□□□□ -2.05
MSH3-202ENST00000512258 R4GN34 69 aa2.23□□□□□ -2.05
MSH3-202ENST00000512258 SSPOA2VEC9 5147 aa2.23□□□□□ -2.05
MSH3-202ENST00000512258 LINC01558Q9Y6Z2 57 aa2.22□□□□□ -2.05
MSH3-202ENST00000512258 A0A1B0GU69 56 aa2.21□□□□□ -2.06
MSH3-202ENST00000512258 SEC61GP60059 68 aa2.21□□□□□ -2.06
MSH3-202ENST00000512258 LINC01554Q52M75 96 aa2.21□□□□□ -2.06
MSH3-202ENST00000512258 FSIP2Q5CZC0 6907 aa2.2□□□□□ -2.06
MSH3-202ENST00000512258 Q5VV11 94 aa2.2□□□□□ -2.06
MSH3-202ENST00000512258 SPATA8Q6RVD6 105 aa2.2□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms