RNA–Protein interactions for RNA: ENST00000508848.5

POLR2J3-213, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 1,030 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-213ENST00000508848 TRAV22A0A0B4J277 110 aa5.12□□□□□ -1.59
POLR2J3-213ENST00000508848 CYP4F30PQ9H0H9 118 aa5.12□□□□□ -1.59
POLR2J3-213ENST00000508848 LOC101927531A0A1B0GV80 90 aa5.11□□□□□ -1.59
POLR2J3-213ENST00000508848 ATOX1O00244 68 aa5.11□□□□□ -1.59
POLR2J3-213ENST00000508848 MT2AP02795 61 aa5.11□□□□□ -1.59
POLR2J3-213ENST00000508848 C4orf26Q17RF5 130 aa5.11□□□□□ -1.59
POLR2J3-213ENST00000508848 KRTAP3-1Q9BYR8 98 aa5.08□□□□□ -1.6
POLR2J3-213ENST00000508848 C1orf64Q8NEQ6 169 aa5.07□□□□□ -1.6
POLR2J3-213ENST00000508848 OCR1Q9BZK8 76 aa5.06□□□□□ -1.6
POLR2J3-213ENST00000508848 CRCT1Q9UGL9 99 aa5.06□□□□□ -1.6
POLR2J3-213ENST00000508848 A0A087WVE0 104 aa5.05□□□□□ -1.6
POLR2J3-213ENST00000508848 MT1FP04733 61 aa5.05□□□□□ -1.6
POLR2J3-213ENST00000508848 KRTAP10-10P60014 251 aa5.05□□□□□ -1.6
POLR2J3-213ENST00000508848 C5orf47Q569G3 176 aa5.04□□□□□ -1.6
POLR2J3-213ENST00000508848 ANAPC13Q9BS18 74 aa5.04□□□□□ -1.6
POLR2J3-213ENST00000508848 H0Y9P7 68 aa5.03□□□□□ -1.6
POLR2J3-213ENST00000508848 H3BPC8 53 aa5.03□□□□□ -1.6
POLR2J3-213ENST00000508848 FAM236AA0A1B0GUQ0 79 aa5.01□□□□□ -1.61
POLR2J3-213ENST00000508848 FAM236BA0A1B0GV22 79 aa5.01□□□□□ -1.61
POLR2J3-213ENST00000508848 SMIM20Q8N5G0 67 aa5.01□□□□□ -1.61
POLR2J3-213ENST00000508848 FSIP2Q5CZC0 6907 aa5□□□□□ -1.61
POLR2J3-213ENST00000508848 MP68P56378 58 aa5□□□□□ -1.61
POLR2J3-213ENST00000508848 CSAG1Q6PB30 78 aa5□□□□□ -1.61
POLR2J3-213ENST00000508848 A8MUN3 132 aa4.99□□□□□ -1.61
POLR2J3-213ENST00000508848 S4R3F8 94 aa4.99□□□□□ -1.61
POLR2J3-213ENST00000508848 LINC00208Q96KT6 92 aa4.97□□□□□ -1.61
POLR2J3-213ENST00000508848 LCA10Q71F78 164 aa4.96□□□□□ -1.62
POLR2J3-213ENST00000508848 SERP2Q8N6R1 65 aa4.93□□□□□ -1.62
POLR2J3-213ENST00000508848 TRAV7A0A075B6U4 112 aa4.92□□□□□ -1.62
POLR2J3-213ENST00000508848 KLKP1Q107X0 134 aa4.91□□□□□ -1.62
POLR2J3-213ENST00000508848 USH2AO75445 5202 aa4.91□□□□□ -1.62
POLR2J3-213ENST00000508848 COX7CP15954 63 aa4.89□□□□□ -1.63
POLR2J3-213ENST00000508848 H0YAA0 97 aa4.88□□□□□ -1.63
POLR2J3-213ENST00000508848 NDUFC1O43677 76 aa4.88□□□□□ -1.63
POLR2J3-213ENST00000508848 CCDC179H3BU77 68 aa4.85□□□□□ -1.63
POLR2J3-213ENST00000508848 CRIPTQ9P021 101 aa4.85□□□□□ -1.63
POLR2J3-213ENST00000508848 DMAC1Q96GE9 116 aa4.84□□□□□ -1.63
POLR2J3-213ENST00000508848 SPRR2GQ9BYE4 73 aa4.84□□□□□ -1.63
POLR2J3-213ENST00000508848 SSPOA2VEC9 5147 aa4.83□□□□□ -1.64
POLR2J3-213ENST00000508848 KRTAP19-6Q3LI70 58 aa4.82□□□□□ -1.64
POLR2J3-213ENST00000508848 C20orf197Q8N268 126 aa4.8□□□□□ -1.64
POLR2J3-213ENST00000508848 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
POLR2J3-213ENST00000508848 ACYP2P14621 99 aa4.77□□□□□ -1.65
POLR2J3-213ENST00000508848 FCGBPQ9Y6R7 5405 aaPredicted RBP4.76□□□□□ -1.65
POLR2J3-213ENST00000508848 SPANXA2-OT1Q8N9U9 137 aa4.75□□□□□ -1.65
POLR2J3-213ENST00000508848 TMEM258P61165 79 aa4.74□□□□□ -1.65
POLR2J3-213ENST00000508848 RPS28P62857 69 aaKnown RBP4.73□□□□□ -1.65
POLR2J3-213ENST00000508848 SNURFQ9Y675 71 aa4.73□□□□□ -1.65
POLR2J3-213ENST00000508848 MT1BP07438 61 aa4.71□□□□□ -1.66
POLR2J3-213ENST00000508848 Q5VV11 94 aa4.71□□□□□ -1.66
POLR2J3-213ENST00000508848 ATP5EP56381 51 aaPredicted RBP4.7□□□□□ -1.66
POLR2J3-213ENST00000508848 SPTSSBQ8NFR3 76 aa4.7□□□□□ -1.66
POLR2J3-213ENST00000508848 ADM2Q7Z4H4 148 aa4.69□□□□□ -1.66
POLR2J3-213ENST00000508848 H7BZZ5 65 aa4.68□□□□□ -1.66
POLR2J3-213ENST00000508848 CYSTM1Q9H1C7 97 aa4.63□□□□□ -1.67
POLR2J3-213ENST00000508848 P0C880 135 aa4.61□□□□□ -1.67
POLR2J3-213ENST00000508848 SERP1Q9Y6X1 66 aa4.61□□□□□ -1.67
POLR2J3-213ENST00000508848 CHKB-CPT1BH3BT56 60 aa4.6□□□□□ -1.67
POLR2J3-213ENST00000508848 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
POLR2J3-213ENST00000508848 R4GN34 69 aa4.6□□□□□ -1.67
POLR2J3-213ENST00000508848 A6NN06 94 aa4.59□□□□□ -1.67
POLR2J3-213ENST00000508848 SMIM26A0A096LP01 95 aa4.54□□□□□ -1.68
POLR2J3-213ENST00000508848 M0QZ58 72 aa4.54□□□□□ -1.68
POLR2J3-213ENST00000508848 PLAC4Q8WY50 150 aa4.52□□□□□ -1.69
POLR2J3-213ENST00000508848 COA5Q86WW8 74 aa4.5□□□□□ -1.69
POLR2J3-213ENST00000508848 PRO2289Q9P1D8 64 aa4.5□□□□□ -1.69
POLR2J3-213ENST00000508848 KRTAP6-3Q3LI67 103 aa4.49□□□□□ -1.69
POLR2J3-213ENST00000508848 MACF1Q9UPN3 7388 aaKnown RBP4.49□□□□□ -1.69
POLR2J3-213ENST00000508848 MT1XP80297 61 aa4.44□□□□□ -1.7
POLR2J3-213ENST00000508848 V9GYY9 64 aa4.43□□□□□ -1.7
POLR2J3-213ENST00000508848 KRTAP23-1A1A580 65 aa4.42□□□□□ -1.7
POLR2J3-213ENST00000508848 SEC61GP60059 68 aa4.42□□□□□ -1.7
POLR2J3-213ENST00000508848 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
POLR2J3-213ENST00000508848 LINC01554Q52M75 96 aa4.39□□□□□ -1.71
POLR2J3-213ENST00000508848 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.39□□□□□ -1.71
POLR2J3-213ENST00000508848 SYNE2Q8WXH0 6885 aaKnown RBP4.39□□□□□ -1.71
POLR2J3-213ENST00000508848 KRTAP5-9P26371 169 aa4.36□□□□□ -1.71
POLR2J3-213ENST00000508848 Q1T7F1 81 aa4.36□□□□□ -1.71
POLR2J3-213ENST00000508848 PRO0628Q9UI54 55 aa4.35□□□□□ -1.71
POLR2J3-213ENST00000508848 KRTAP13-4Q3LI77 160 aa4.34□□□□□ -1.71
POLR2J3-213ENST00000508848 PRR15LQ9BU68 103 aa4.34□□□□□ -1.71
POLR2J3-213ENST00000508848 A0A1B0GU33 70 aa4.33□□□□□ -1.72
POLR2J3-213ENST00000508848 LINC01558Q9Y6Z2 57 aa4.31□□□□□ -1.72
POLR2J3-213ENST00000508848 A0A1B0GU69 56 aa4.29□□□□□ -1.72
POLR2J3-213ENST00000508848 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
POLR2J3-213ENST00000508848 KRTAP10-12P60413 245 aa4.27□□□□□ -1.73
POLR2J3-213ENST00000508848 KMT2DO14686 5537 aa4.23□□□□□ -1.73
POLR2J3-213ENST00000508848 PSPHP1O15172 72 aa4.23□□□□□ -1.73
POLR2J3-213ENST00000508848 SPATA8Q6RVD6 105 aa4.22□□□□□ -1.73
POLR2J3-213ENST00000508848 CAMK2N1Q7Z7J9 78 aa4.22□□□□□ -1.73
POLR2J3-213ENST00000508848 KRTAP8-1Q8IUC2 63 aa4.21□□□□□ -1.74
POLR2J3-213ENST00000508848 KRTAP10-7P60409 375 aaPredicted RBP4.2□□□□□ -1.74
POLR2J3-213ENST00000508848 KRTAP12-1P59990 96 aa4.19□□□□□ -1.74
POLR2J3-213ENST00000508848 MUC12Q9UKN1 5478 aa4.19□□□□□ -1.74
POLR2J3-213ENST00000508848 A0A0D9SG42 100 aa4.17□□□□□ -1.74
POLR2J3-213ENST00000508848 UQCR11O14957 56 aa4.17□□□□□ -1.74
POLR2J3-213ENST00000508848 A6NED7 52 aa4.16□□□□□ -1.74
POLR2J3-213ENST00000508848 SPRR2FQ96RM1 72 aa4.16□□□□□ -1.74
POLR2J3-213ENST00000508848 MDN1Q9NU22 5596 aa4.14□□□□□ -1.75
POLR2J3-213ENST00000508848 A0A0A0MQY5 61 aa4.14□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms