RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 UQCR11O14957 56 aa6.19□□□□□ -1.42
PRPF40B-203ENST00000508736 SEC61GP60059 68 aa6.19□□□□□ -1.42
PRPF40B-203ENST00000508736 KTN1-AS1Q86SY8 53 aa6.19□□□□□ -1.42
PRPF40B-203ENST00000508736 SPATA8Q6RVD6 105 aa6.17□□□□□ -1.42
PRPF40B-203ENST00000508736 MIR22HGQ0VDD5 57 aa6.15□□□□□ -1.42
PRPF40B-203ENST00000508736 RPL37P61927 97 aaKnown RBP6.11□□□□□ -1.43
PRPF40B-203ENST00000508736 HERC1Q15751 4861 aa6.1□□□□□ -1.43
PRPF40B-203ENST00000508736 XP32Q5T750 250 aa6.09□□□□□ -1.43
PRPF40B-203ENST00000508736 COX6B2Q6YFQ2 88 aa6.09□□□□□ -1.43
PRPF40B-203ENST00000508736 KRTAP3-1Q9BYR8 98 aa6.09□□□□□ -1.44
PRPF40B-203ENST00000508736 TPRXLQ17RH7 258 aa6.05□□□□□ -1.44
PRPF40B-203ENST00000508736 A0A1B0GU33 70 aa5.98□□□□□ -1.45
PRPF40B-203ENST00000508736 H1FX-AS1Q4G0G2 97 aa5.96□□□□□ -1.45
PRPF40B-203ENST00000508736 RBM12B-AS1Q9P1G2 102 aa5.95□□□□□ -1.46
PRPF40B-203ENST00000508736 H0YAA0 97 aa5.94□□□□□ -1.46
PRPF40B-203ENST00000508736 HMCN2Q8NDA2 5059 aa5.93□□□□□ -1.46
PRPF40B-203ENST00000508736 LPAP08519 4548 aa5.91□□□□□ -1.46
PRPF40B-203ENST00000508736 LRP2P98164 4655 aa5.9□□□□□ -1.47
PRPF40B-203ENST00000508736 S4R3F8 94 aa5.9□□□□□ -1.47
PRPF40B-203ENST00000508736 PRAC1Q96KF2 57 aa5.85□□□□□ -1.47
PRPF40B-203ENST00000508736 K7ERS5 55 aa5.85□□□□□ -1.47
PRPF40B-203ENST00000508736 KRTAP3-3Q9BYR6 98 aa5.85□□□□□ -1.47
PRPF40B-203ENST00000508736 ADM2Q7Z4H4 148 aa5.83□□□□□ -1.48
PRPF40B-203ENST00000508736 SEC61BP60468 96 aaKnown RBP5.82□□□□□ -1.48
PRPF40B-203ENST00000508736 KRTAP10-6P60371 365 aaPredicted RBP5.78□□□□□ -1.48
PRPF40B-203ENST00000508736 KRTAP3-2Q9BYR7 98 aa5.75□□□□□ -1.49
PRPF40B-203ENST00000508736 MUC17Q685J3 4493 aa5.74□□□□□ -1.49
PRPF40B-203ENST00000508736 CSAG1Q6PB30 78 aa5.73□□□□□ -1.49
PRPF40B-203ENST00000508736 UBR4Q5T4S7 5183 aa5.72□□□□□ -1.49
PRPF40B-203ENST00000508736 LINC01554Q52M75 96 aa5.7□□□□□ -1.5
PRPF40B-203ENST00000508736 P0C880 135 aa5.68□□□□□ -1.5
PRPF40B-203ENST00000508736 KRTAP13-4Q3LI77 160 aa5.68□□□□□ -1.5
PRPF40B-203ENST00000508736 A0A0D9SG42 100 aa5.66□□□□□ -1.5
PRPF40B-203ENST00000508736 KRTAP4-1Q9BYQ7 146 aa5.64□□□□□ -1.51
PRPF40B-203ENST00000508736 RNF213Q63HN8 5207 aa5.63□□□□□ -1.51
PRPF40B-203ENST00000508736 ROMO1P60602 79 aa5.63□□□□□ -1.51
PRPF40B-203ENST00000508736 KRTAP25-1Q3LHN0 102 aa5.63□□□□□ -1.51
PRPF40B-203ENST00000508736 MUC2Q02817 5179 aa5.62□□□□□ -1.51
PRPF40B-203ENST00000508736 M0QZ58 72 aa5.6□□□□□ -1.51
PRPF40B-203ENST00000508736 KRTAP19-2Q3LHN2 52 aa5.58□□□□□ -1.52
PRPF40B-203ENST00000508736 KRTAP12-2P59991 146 aa5.51□□□□□ -1.53
PRPF40B-203ENST00000508736 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
PRPF40B-203ENST00000508736 SPINT4Q6UDR6 99 aa5.5□□□□□ -1.53
PRPF40B-203ENST00000508736 CRIPTQ9P021 101 aa5.47□□□□□ -1.53
PRPF40B-203ENST00000508736 R4GN34 69 aa5.46□□□□□ -1.54
PRPF40B-203ENST00000508736 FLGP20930 4061 aaPredicted RBP5.43□□□□□ -1.54
PRPF40B-203ENST00000508736 LCE2CQ5TA81 110 aa5.41□□□□□ -1.54
PRPF40B-203ENST00000508736 FAT4Q6V0I7 4981 aa5.41□□□□□ -1.54
PRPF40B-203ENST00000508736 C10orf95Q9H7T3 257 aa5.32□□□□□ -1.56
PRPF40B-203ENST00000508736 MT1HP80294 61 aa5.32□□□□□ -1.56
PRPF40B-203ENST00000508736 M0R2T5 61 aa5.29□□□□□ -1.56
PRPF40B-203ENST00000508736 LORP23490 312 aaPredicted RBP5.29□□□□□ -1.56
PRPF40B-203ENST00000508736 LCE2AQ5TA79 106 aaPredicted RBP5.28□□□□□ -1.56
PRPF40B-203ENST00000508736 CAMK2N1Q7Z7J9 78 aa5.18□□□□□ -1.58
PRPF40B-203ENST00000508736 SPRR2GQ9BYE4 73 aa5.09□□□□□ -1.6
PRPF40B-203ENST00000508736 KRTAP9-8Q9BYQ0 159 aa5.09□□□□□ -1.6
PRPF40B-203ENST00000508736 PP632Q6XCG6 107 aa5.08□□□□□ -1.6
PRPF40B-203ENST00000508736 KRTAP15-1Q3LI76 137 aa5.07□□□□□ -1.6
PRPF40B-203ENST00000508736 MT2AP02795 61 aa5.06□□□□□ -1.6
PRPF40B-203ENST00000508736 MT1FP04733 61 aa5.03□□□□□ -1.6
PRPF40B-203ENST00000508736 KRTAP10-10P60014 251 aa5.03□□□□□ -1.6
PRPF40B-203ENST00000508736 KRTAP19-1Q8IUB9 90 aa5.03□□□□□ -1.6
PRPF40B-203ENST00000508736 H3BS24 57 aa5□□□□□ -1.61
PRPF40B-203ENST00000508736 TNP1P09430 55 aa4.98□□□□□ -1.61
PRPF40B-203ENST00000508736 PLAC4Q8WY50 150 aa4.97□□□□□ -1.61
PRPF40B-203ENST00000508736 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
PRPF40B-203ENST00000508736 KRTAP19-8Q3LI54 63 aa4.92□□□□□ -1.62
PRPF40B-203ENST00000508736 KRTAP9-3Q9BYQ3 159 aa4.91□□□□□ -1.62
PRPF40B-203ENST00000508736 NDUFAF8A1L188 74 aa4.9□□□□□ -1.63
PRPF40B-203ENST00000508736 LCE2DQ5TA82 110 aaPredicted RBP4.89□□□□□ -1.63
PRPF40B-203ENST00000508736 KRTAP9-2Q9BYQ4 174 aa4.86□□□□□ -1.63
PRPF40B-203ENST00000508736 LCE2BO14633 110 aa4.83□□□□□ -1.64
PRPF40B-203ENST00000508736 MT1BP07438 61 aa4.82□□□□□ -1.64
PRPF40B-203ENST00000508736 FSIP2Q5CZC0 6907 aa4.77□□□□□ -1.65
PRPF40B-203ENST00000508736 LUZP6Q538Z0 58 aa4.75□□□□□ -1.65
PRPF40B-203ENST00000508736 USH2AO75445 5202 aa4.73□□□□□ -1.65
PRPF40B-203ENST00000508736 KRTAP10-5P60370 271 aa4.71□□□□□ -1.66
PRPF40B-203ENST00000508736 MT1XP80297 61 aa4.71□□□□□ -1.66
PRPF40B-203ENST00000508736 LCE3AQ5TA76 89 aa4.66□□□□□ -1.66
PRPF40B-203ENST00000508736 PRO2289Q9P1D8 64 aa4.65□□□□□ -1.66
PRPF40B-203ENST00000508736 CRCT1Q9UGL9 99 aa4.65□□□□□ -1.66
PRPF40B-203ENST00000508736 SSPOA2VEC9 5147 aa4.63□□□□□ -1.67
PRPF40B-203ENST00000508736 SPRR5A0A1B0GTR4 108 aa4.62□□□□□ -1.67
PRPF40B-203ENST00000508736 KRTAP8-1Q8IUC2 63 aa4.59□□□□□ -1.67
PRPF40B-203ENST00000508736 KRTAP9-6A0A140TA67 174 aa4.58□□□□□ -1.68
PRPF40B-203ENST00000508736 KRTAP19-6Q3LI70 58 aa4.58□□□□□ -1.68
PRPF40B-203ENST00000508736 KRTAP10-12P60413 245 aa4.57□□□□□ -1.68
PRPF40B-203ENST00000508736 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
PRPF40B-203ENST00000508736 FCGBPQ9Y6R7 5405 aaPredicted RBP4.49□□□□□ -1.69
PRPF40B-203ENST00000508736 KRTAP12-3P60328 96 aa4.48□□□□□ -1.69
PRPF40B-203ENST00000508736 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
PRPF40B-203ENST00000508736 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.3□□□□□ -1.72
PRPF40B-203ENST00000508736 KRTAP19-5Q3LI72 72 aa4.3□□□□□ -1.72
PRPF40B-203ENST00000508736 MACF1Q9UPN3 7388 aaKnown RBP4.29□□□□□ -1.72
PRPF40B-203ENST00000508736 KRTAP4-8A0A0G2JLE6 195 aa4.28□□□□□ -1.72
PRPF40B-203ENST00000508736 KRTAP4-8Q9BYQ9 185 aa4.28□□□□□ -1.72
PRPF40B-203ENST00000508736 KMT2DO14686 5537 aa4.26□□□□□ -1.73
PRPF40B-203ENST00000508736 SYNE2Q8WXH0 6885 aaKnown RBP4.21□□□□□ -1.74
PRPF40B-203ENST00000508736 LCE3CQ5T5A8 94 aa4.21□□□□□ -1.74
PRPF40B-203ENST00000508736 KRTAP19-7Q3SYF9 63 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 121.3 ms