RNA–Protein interactions for RNA: ENST00000508338.1

SH3BP2-212, Transcript of SH3 domain binding protein 2, humanhuman

TSL 3

Gene SH3BP2, Length 491 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BP2-212ENST00000508338 KRTAP3-3Q9BYR6 98 aa12.58□□□□□ -0.4
SH3BP2-212ENST00000508338 DMAC1Q96GE9 116 aa12.56□□□□□ -0.4
SH3BP2-212ENST00000508338 KRTAP9-3Q9BYQ3 159 aa12.56□□□□□ -0.4
SH3BP2-212ENST00000508338 C20orf197Q8N268 126 aa12.46□□□□□ -0.41
SH3BP2-212ENST00000508338 SNURFQ9Y675 71 aa12.45□□□□□ -0.42
SH3BP2-212ENST00000508338 FSIP2Q5CZC0 6907 aa12.44□□□□□ -0.42
SH3BP2-212ENST00000508338 KRTAP9-6A0A140TA67 174 aa12.44□□□□□ -0.42
SH3BP2-212ENST00000508338 CRCT1Q9UGL9 99 aa12.44□□□□□ -0.42
SH3BP2-212ENST00000508338 ACYP2P14621 99 aa12.4□□□□□ -0.42
SH3BP2-212ENST00000508338 H0YAA0 97 aa12.36□□□□□ -0.43
SH3BP2-212ENST00000508338 COX7CP15954 63 aa12.36□□□□□ -0.43
SH3BP2-212ENST00000508338 SPANXA2-OT1Q8N9U9 137 aa12.36□□□□□ -0.43
SH3BP2-212ENST00000508338 LCE2BO14633 110 aa12.35□□□□□ -0.43
SH3BP2-212ENST00000508338 USH2AO75445 5202 aa12.27□□□□□ -0.44
SH3BP2-212ENST00000508338 CRIPTQ9P021 101 aa12.25□□□□□ -0.45
SH3BP2-212ENST00000508338 SPTSSBQ8NFR3 76 aa12.23□□□□□ -0.45
SH3BP2-212ENST00000508338 ANAPC13Q9BS18 74 aa12.19□□□□□ -0.46
SH3BP2-212ENST00000508338 CHKB-CPT1BH3BT56 60 aa12.17□□□□□ -0.46
SH3BP2-212ENST00000508338 ADM2Q7Z4H4 148 aa12.15□□□□□ -0.46
SH3BP2-212ENST00000508338 SPRR2GQ9BYE4 73 aa12.14□□□□□ -0.47
SH3BP2-212ENST00000508338 KRTAP19-1Q8IUB9 90 aa12.13□□□□□ -0.47
SH3BP2-212ENST00000508338 SSPOA2VEC9 5147 aa12.05□□□□□ -0.48
SH3BP2-212ENST00000508338 H7BZZ5 65 aa12.02□□□□□ -0.49
SH3BP2-212ENST00000508338 Q5VV11 94 aa11.97□□□□□ -0.49
SH3BP2-212ENST00000508338 KRTAP19-8Q3LI54 63 aa11.96□□□□□ -0.49
SH3BP2-212ENST00000508338 KRTAP19-6Q3LI70 58 aa11.92□□□□□ -0.5
SH3BP2-212ENST00000508338 CYSTM1Q9H1C7 97 aa11.92□□□□□ -0.5
SH3BP2-212ENST00000508338 COA5Q86WW8 74 aa11.9□□□□□ -0.5
SH3BP2-212ENST00000508338 P0C880 135 aa11.88□□□□□ -0.51
SH3BP2-212ENST00000508338 KRTAP3-2Q9BYR7 98 aa11.87□□□□□ -0.51
SH3BP2-212ENST00000508338 R4GN34 69 aa11.87□□□□□ -0.51
SH3BP2-212ENST00000508338 CCDC179H3BU77 68 aa11.83□□□□□ -0.52
SH3BP2-212ENST00000508338 MT1BP07438 61 aa11.82□□□□□ -0.52
SH3BP2-212ENST00000508338 M0QZ58 72 aa11.75□□□□□ -0.53
SH3BP2-212ENST00000508338 FCGBPQ9Y6R7 5405 aaPredicted RBP11.73□□□□□ -0.53
SH3BP2-212ENST00000508338 ATP5EP56381 51 aaPredicted RBP11.73□□□□□ -0.53
SH3BP2-212ENST00000508338 SEC61GP60059 68 aa11.64□□□□□ -0.55
SH3BP2-212ENST00000508338 A6NN06 94 aa11.59□□□□□ -0.55
SH3BP2-212ENST00000508338 PLAC4Q8WY50 150 aa11.58□□□□□ -0.56
SH3BP2-212ENST00000508338 SERP1Q9Y6X1 66 aa11.57□□□□□ -0.56
SH3BP2-212ENST00000508338 TMEM258P61165 79 aa11.56□□□□□ -0.56
SH3BP2-212ENST00000508338 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.53□□□□□ -0.56
SH3BP2-212ENST00000508338 KRTAP10-5P60370 271 aa11.51□□□□□ -0.57
SH3BP2-212ENST00000508338 LINC01554Q52M75 96 aa11.51□□□□□ -0.57
SH3BP2-212ENST00000508338 PRO2289Q9P1D8 64 aa11.41□□□□□ -0.58
SH3BP2-212ENST00000508338 A0A1B0GU69 56 aa11.34□□□□□ -0.59
SH3BP2-212ENST00000508338 MACF1Q9UPN3 7388 aaKnown RBP11.33□□□□□ -0.6
SH3BP2-212ENST00000508338 A0A1B0GU33 70 aa11.3□□□□□ -0.6
SH3BP2-212ENST00000508338 KRTAP13-4Q3LI77 160 aa11.26□□□□□ -0.61
SH3BP2-212ENST00000508338 KRTAP9-7A8MTY7 169 aa11.25□□□□□ -0.61
SH3BP2-212ENST00000508338 PRR15LQ9BU68 103 aa11.23□□□□□ -0.61
SH3BP2-212ENST00000508338 MT1XP80297 61 aa11.22□□□□□ -0.61
SH3BP2-212ENST00000508338 LINC01558Q9Y6Z2 57 aa11.14□□□□□ -0.63
SH3BP2-212ENST00000508338 SPATA8Q6RVD6 105 aa11.1□□□□□ -0.63
SH3BP2-212ENST00000508338 SYNE2Q8WXH0 6885 aaKnown RBP11.08□□□□□ -0.64
SH3BP2-212ENST00000508338 SMIM26A0A096LP01 95 aa11.04□□□□□ -0.64
SH3BP2-212ENST00000508338 A0A0D9SG42 100 aa11.03□□□□□ -0.64
SH3BP2-212ENST00000508338 KRTAP6-3Q3LI67 103 aa11□□□□□ -0.65
SH3BP2-212ENST00000508338 PCP4P48539 62 aa10.99□□□□□ -0.65
SH3BP2-212ENST00000508338 CAMK2N1Q7Z7J9 78 aa10.99□□□□□ -0.65
SH3BP2-212ENST00000508338 KRTAP12-2P59991 146 aa10.96□□□□□ -0.65
SH3BP2-212ENST00000508338 V9GYY9 64 aa10.92□□□□□ -0.66
SH3BP2-212ENST00000508338 SPINT4Q6UDR6 99 aa10.89□□□□□ -0.67
SH3BP2-212ENST00000508338 KRTAP12-1P59990 96 aa10.84□□□□□ -0.67
SH3BP2-212ENST00000508338 UQCR11O14957 56 aa10.82□□□□□ -0.68
SH3BP2-212ENST00000508338 Q1T7F1 81 aa10.78□□□□□ -0.68
SH3BP2-212ENST00000508338 A8MU10 97 aa10.76□□□□□ -0.69
SH3BP2-212ENST00000508338 KRTAP5-9P26371 169 aa10.71□□□□□ -0.69
SH3BP2-212ENST00000508338 KRTAP10-12P60413 245 aa10.71□□□□□ -0.69
SH3BP2-212ENST00000508338 RPS28P62857 69 aaKnown RBP10.71□□□□□ -0.69
SH3BP2-212ENST00000508338 KRTAP10-7P60409 375 aaPredicted RBP10.69□□□□□ -0.7
SH3BP2-212ENST00000508338 KRTAP8-1Q8IUC2 63 aa10.64□□□□□ -0.71
SH3BP2-212ENST00000508338 KMT2DO14686 5537 aa10.62□□□□□ -0.71
SH3BP2-212ENST00000508338 PSPHP1O15172 72 aa10.6□□□□□ -0.71
SH3BP2-212ENST00000508338 MIR22HGQ0VDD5 57 aa10.58□□□□□ -0.72
SH3BP2-212ENST00000508338 KRTAP4-8A0A0G2JLE6 195 aa10.5□□□□□ -0.73
SH3BP2-212ENST00000508338 KRTAP4-8Q9BYQ9 185 aa10.5□□□□□ -0.73
SH3BP2-212ENST00000508338 SPRR2FQ96RM1 72 aa10.48□□□□□ -0.73
SH3BP2-212ENST00000508338 MUC12Q9UKN1 5478 aa10.47□□□□□ -0.73
SH3BP2-212ENST00000508338 K7ERS5 55 aa10.4□□□□□ -0.74
SH3BP2-212ENST00000508338 NEBP20929 6669 aa10.38□□□□□ -0.75
SH3BP2-212ENST00000508338 A6NED7 52 aa10.34□□□□□ -0.75
SH3BP2-212ENST00000508338 TNP1P09430 55 aa10.29□□□□□ -0.76
SH3BP2-212ENST00000508338 C10orf95Q9H7T3 257 aa10.29□□□□□ -0.76
SH3BP2-212ENST00000508338 MDN1Q9NU22 5596 aa10.27□□□□□ -0.77
SH3BP2-212ENST00000508338 SPRR2EP22531 72 aa10.21□□□□□ -0.77
SH3BP2-212ENST00000508338 SPRR2BP35325 72 aa10.21□□□□□ -0.77
SH3BP2-212ENST00000508338 SPRR2AP35326 72 aa10.21□□□□□ -0.77
SH3BP2-212ENST00000508338 LCE1AQ5T7P2 110 aa10.13□□□□□ -0.79
SH3BP2-212ENST00000508338 KRTAP19-7Q3SYF9 63 aa10.02□□□□□ -0.81
SH3BP2-212ENST00000508338 CDC42SE1Q9NRR8 79 aa10□□□□□ -0.81
SH3BP2-212ENST00000508338 KRTAP25-1Q3LHN0 102 aa9.99□□□□□ -0.81
SH3BP2-212ENST00000508338 KRTAP20-1Q3LI63 56 aa9.94□□□□□ -0.82
SH3BP2-212ENST00000508338 MT1EP04732 61 aa9.93□□□□□ -0.82
SH3BP2-212ENST00000508338 LCE3AQ5TA76 89 aa9.93□□□□□ -0.82
SH3BP2-212ENST00000508338 KRTAP19-5Q3LI72 72 aa9.9□□□□□ -0.82
SH3BP2-212ENST00000508338 SPRR2DP22532 72 aa9.87□□□□□ -0.83
SH3BP2-212ENST00000508338 KRTAP2-3P0C7H8 128 aa9.85□□□□□ -0.83
SH3BP2-212ENST00000508338 KRTAP2-4Q9BYR9 128 aa9.85□□□□□ -0.83
SH3BP2-212ENST00000508338 KRTAP19-3Q7Z4W3 81 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 130.1 ms