RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 LCE5AQ5TCM9 118 aa6.77□□□□□ -1.33
RAB28-205ENST00000508274 MACF1Q9UPN3 7388 aaKnown RBP6.77□□□□□ -1.33
RAB28-205ENST00000508274 CASC2Q6XLA1 102 aa6.76□□□□□ -1.33
RAB28-205ENST00000508274 C7orf65Q6ZTY9 151 aa6.76□□□□□ -1.33
RAB28-205ENST00000508274 HCG22E2RYF7 251 aa6.75□□□□□ -1.33
RAB28-205ENST00000508274 SVIPQ8NHG7 77 aa6.74□□□□□ -1.33
RAB28-205ENST00000508274 CXCL6P80162 114 aa6.73□□□□□ -1.33
RAB28-205ENST00000508274 ATOX1O00244 68 aa6.71□□□□□ -1.34
RAB28-205ENST00000508274 A0A087WVE0 104 aa6.7□□□□□ -1.34
RAB28-205ENST00000508274 KRTAP19-6Q3LI70 58 aa6.7□□□□□ -1.34
RAB28-205ENST00000508274 C4orf26Q17RF5 130 aa6.69□□□□□ -1.34
RAB28-205ENST00000508274 KRTAP4-11Q9BYQ6 195 aa6.69□□□□□ -1.34
RAB28-205ENST00000508274 KRTAP4-2Q9BYR5 136 aa6.69□□□□□ -1.34
RAB28-205ENST00000508274 CCDC179H3BU77 68 aa6.68□□□□□ -1.34
RAB28-205ENST00000508274 SYNE2Q8WXH0 6885 aaKnown RBP6.67□□□□□ -1.34
RAB28-205ENST00000508274 UQCRQO14949 82 aa6.65□□□□□ -1.35
RAB28-205ENST00000508274 COX7CP15954 63 aa6.65□□□□□ -1.35
RAB28-205ENST00000508274 KRTAP3-1Q9BYR8 98 aa6.65□□□□□ -1.35
RAB28-205ENST00000508274 SERP2Q8N6R1 65 aa6.63□□□□□ -1.35
RAB28-205ENST00000508274 C5orf47Q569G3 176 aa6.59□□□□□ -1.35
RAB28-205ENST00000508274 SMIM20Q8N5G0 67 aa6.57□□□□□ -1.36
RAB28-205ENST00000508274 TRAV7A0A075B6U4 112 aa6.56□□□□□ -1.36
RAB28-205ENST00000508274 C1orf64Q8NEQ6 169 aa6.54□□□□□ -1.36
RAB28-205ENST00000508274 S4R3F8 94 aa6.54□□□□□ -1.36
RAB28-205ENST00000508274 LCA10Q71F78 164 aa6.52□□□□□ -1.37
RAB28-205ENST00000508274 TP53AIP1Q9HCN2 124 aa6.5□□□□□ -1.37
RAB28-205ENST00000508274 CSAG1Q6PB30 78 aa6.48□□□□□ -1.37
RAB28-205ENST00000508274 OCR1Q9BZK8 76 aa6.48□□□□□ -1.37
RAB28-205ENST00000508274 CYSTM1Q9H1C7 97 aa6.48□□□□□ -1.37
RAB28-205ENST00000508274 KLKP1Q107X0 134 aa6.45□□□□□ -1.38
RAB28-205ENST00000508274 C20orf197Q8N268 126 aa6.45□□□□□ -1.38
RAB28-205ENST00000508274 MT1BP07438 61 aa6.44□□□□□ -1.38
RAB28-205ENST00000508274 TMEM258P61165 79 aa6.44□□□□□ -1.38
RAB28-205ENST00000508274 CYP4F30PQ9H0H9 118 aa6.43□□□□□ -1.38
RAB28-205ENST00000508274 SPRR2GQ9BYE4 73 aa6.41□□□□□ -1.38
RAB28-205ENST00000508274 KRTAP6-3Q3LI67 103 aa6.4□□□□□ -1.38
RAB28-205ENST00000508274 TRAV22A0A0B4J277 110 aa6.4□□□□□ -1.39
RAB28-205ENST00000508274 KRTAP19-8Q3LI54 63 aa6.4□□□□□ -1.39
RAB28-205ENST00000508274 Q5VV11 94 aa6.4□□□□□ -1.39
RAB28-205ENST00000508274 H7BZZ5 65 aa6.39□□□□□ -1.39
RAB28-205ENST00000508274 NDUFC1O43677 76 aa6.38□□□□□ -1.39
RAB28-205ENST00000508274 A6NN06 94 aa6.37□□□□□ -1.39
RAB28-205ENST00000508274 SNURFQ9Y675 71 aa6.37□□□□□ -1.39
RAB28-205ENST00000508274 KRTAP23-1A1A580 65 aa6.35□□□□□ -1.39
RAB28-205ENST00000508274 LOC101927531A0A1B0GV80 90 aa6.35□□□□□ -1.39
RAB28-205ENST00000508274 RPS28P62857 69 aaKnown RBP6.34□□□□□ -1.39
RAB28-205ENST00000508274 H0Y9P7 68 aa6.29□□□□□ -1.4
RAB28-205ENST00000508274 ATP5EP56381 51 aaPredicted RBP6.29□□□□□ -1.4
RAB28-205ENST00000508274 KRTAP10-5P60370 271 aa6.29□□□□□ -1.4
RAB28-205ENST00000508274 H3BPC8 53 aa6.26□□□□□ -1.41
RAB28-205ENST00000508274 MP68P56378 58 aa6.25□□□□□ -1.41
RAB28-205ENST00000508274 SERP1Q9Y6X1 66 aa6.23□□□□□ -1.41
RAB28-205ENST00000508274 NEBP20929 6669 aa6.23□□□□□ -1.41
RAB28-205ENST00000508274 CRIPTQ9P021 101 aa6.23□□□□□ -1.41
RAB28-205ENST00000508274 LINC00208Q96KT6 92 aa6.2□□□□□ -1.42
RAB28-205ENST00000508274 MUC12Q9UKN1 5478 aa6.18□□□□□ -1.42
RAB28-205ENST00000508274 H0YAA0 97 aa6.18□□□□□ -1.42
RAB28-205ENST00000508274 A8MUN3 132 aa6.15□□□□□ -1.42
RAB28-205ENST00000508274 ADM2Q7Z4H4 148 aa6.14□□□□□ -1.43
RAB28-205ENST00000508274 SPANXA2-OT1Q8N9U9 137 aa6.14□□□□□ -1.43
RAB28-205ENST00000508274 SMIM26A0A096LP01 95 aa6.1□□□□□ -1.43
RAB28-205ENST00000508274 KRTAP5-9P26371 169 aa6.1□□□□□ -1.43
RAB28-205ENST00000508274 KMT2DO14686 5537 aa6.04□□□□□ -1.44
RAB28-205ENST00000508274 P0C880 135 aa6.02□□□□□ -1.45
RAB28-205ENST00000508274 MT1XP80297 61 aa6.02□□□□□ -1.45
RAB28-205ENST00000508274 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
RAB28-205ENST00000508274 DMAC1Q96GE9 116 aa5.99□□□□□ -1.45
RAB28-205ENST00000508274 MDN1Q9NU22 5596 aa5.99□□□□□ -1.45
RAB28-205ENST00000508274 R4GN34 69 aa5.98□□□□□ -1.45
RAB28-205ENST00000508274 KRTAP20-1Q3LI63 56 aa5.97□□□□□ -1.45
RAB28-205ENST00000508274 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
RAB28-205ENST00000508274 PLAC4Q8WY50 150 aa5.97□□□□□ -1.45
RAB28-205ENST00000508274 M0QZ58 72 aa5.95□□□□□ -1.46
RAB28-205ENST00000508274 Q1T7F1 81 aa5.94□□□□□ -1.46
RAB28-205ENST00000508274 COA5Q86WW8 74 aa5.93□□□□□ -1.46
RAB28-205ENST00000508274 SPRR2FQ96RM1 72 aa5.91□□□□□ -1.46
RAB28-205ENST00000508274 V9GYY9 64 aa5.89□□□□□ -1.47
RAB28-205ENST00000508274 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
RAB28-205ENST00000508274 ACYP2P14621 99 aa5.86□□□□□ -1.47
RAB28-205ENST00000508274 SPRR2EP22531 72 aa5.84□□□□□ -1.47
RAB28-205ENST00000508274 SPRR2BP35325 72 aa5.84□□□□□ -1.47
RAB28-205ENST00000508274 SPRR2AP35326 72 aa5.84□□□□□ -1.47
RAB28-205ENST00000508274 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
RAB28-205ENST00000508274 KRTAP8-1Q8IUC2 63 aa5.84□□□□□ -1.47
RAB28-205ENST00000508274 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
RAB28-205ENST00000508274 KRTAP2-3P0C7H8 128 aa5.78□□□□□ -1.48
RAB28-205ENST00000508274 KRTAP2-4Q9BYR9 128 aa5.78□□□□□ -1.48
RAB28-205ENST00000508274 PSPHP1O15172 72 aa5.77□□□□□ -1.49
RAB28-205ENST00000508274 KRTAP5-3Q6L8H2 238 aa5.76□□□□□ -1.49
RAB28-205ENST00000508274 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
RAB28-205ENST00000508274 LCE1AQ5T7P2 110 aa5.76□□□□□ -1.49
RAB28-205ENST00000508274 CHKB-CPT1BH3BT56 60 aa5.74□□□□□ -1.49
RAB28-205ENST00000508274 PRR15LQ9BU68 103 aa5.74□□□□□ -1.49
RAB28-205ENST00000508274 SPTSSBQ8NFR3 76 aa5.72□□□□□ -1.49
RAB28-205ENST00000508274 PRO0628Q9UI54 55 aa5.72□□□□□ -1.49
RAB28-205ENST00000508274 BRK1Q8WUW1 75 aa5.7□□□□□ -1.5
RAB28-205ENST00000508274 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
RAB28-205ENST00000508274 SPRR2DP22532 72 aa5.64□□□□□ -1.51
RAB28-205ENST00000508274 KRTAP13-4Q3LI77 160 aa5.61□□□□□ -1.51
RAB28-205ENST00000508274 A0A1B0GU69 56 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 96.7 ms