RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 DMBT1Q9UGM3 2413 aaPredicted RBP1.21□□□□□ -2.22
TOPBP1-205ENST00000506779 FRAS1Q86XX4 4008 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 DNAH7Q8WXX0 4024 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 TRAV22A0A0B4J277 110 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 NDUFS5O43920 106 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 ATP5EP56381 51 aaPredicted RBP1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 KRTAP10-4P60372 401 aaPredicted RBP1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 TMEM258P61165 79 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 KLKP1Q107X0 134 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 KRTAP6-3Q3LI67 103 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 FP248Q71RG6 208 aaPredicted RBP1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 WFDC13Q8IUB5 93 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 C20orf197Q8N268 126 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 Q96NJ1 140 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 MRPL34Q9BQ48 92 aaKnown RBP1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 LYSTQ99698 3801 aa1.2□□□□□ -2.22
TOPBP1-205ENST00000506779 MMP24-AS1A0A0U1RRL7 71 aa1.19□□□□□ -2.22
TOPBP1-205ENST00000506779 LOC101927531A0A1B0GV80 90 aa1.19□□□□□ -2.22
TOPBP1-205ENST00000506779 CCDC179H3BU77 68 aa1.19□□□□□ -2.22
TOPBP1-205ENST00000506779 RPS28P62857 69 aaKnown RBP1.19□□□□□ -2.22
TOPBP1-205ENST00000506779 ALMS1Q8TCU4 4167 aa1.19□□□□□ -2.22
TOPBP1-205ENST00000506779 DNAH17Q9UFH2 4485 aa1.19□□□□□ -2.22
TOPBP1-205ENST00000506779 DNAH10Q8IVF4 4471 aa1.18□□□□□ -2.22
TOPBP1-205ENST00000506779 DNAH2Q9P225 4427 aa1.18□□□□□ -2.22
TOPBP1-205ENST00000506779 HECTD4Q9Y4D8 3996 aa1.18□□□□□ -2.22
TOPBP1-205ENST00000506779 H0Y9P7 68 aa1.18□□□□□ -2.22
TOPBP1-205ENST00000506779 C1orf64Q8NEQ6 169 aa1.18□□□□□ -2.22
TOPBP1-205ENST00000506779 LINC00208Q96KT6 92 aa1.18□□□□□ -2.22
TOPBP1-205ENST00000506779 KMT2AQ03164 3969 aa1.18□□□□□ -2.22
TOPBP1-205ENST00000506779 FAM236DA0A1B0GTK5 79 aa1.17□□□□□ -2.22
TOPBP1-205ENST00000506779 H7BZZ5 65 aa1.17□□□□□ -2.22
TOPBP1-205ENST00000506779 FAM236CP0DP71 79 aa1.17□□□□□ -2.22
TOPBP1-205ENST00000506779 ATP11AUNQ6ZP68 121 aa1.17□□□□□ -2.22
TOPBP1-205ENST00000506779 ZCCHC13Q8WW36 166 aaKnown RBP1.17□□□□□ -2.22
TOPBP1-205ENST00000506779 SNURFQ9Y675 71 aa1.17□□□□□ -2.22
TOPBP1-205ENST00000506779 PKHD1P08F94 4074 aa1.17□□□□□ -2.22
TOPBP1-205ENST00000506779 DNAH6Q9C0G6 4158 aa1.17□□□□□ -2.22
TOPBP1-205ENST00000506779 C20orf166-AS1Q96NR2 134 aa1.16□□□□□ -2.22
TOPBP1-205ENST00000506779 CYP4F30PQ9H0H9 118 aa1.16□□□□□ -2.22
TOPBP1-205ENST00000506779 SERP1Q9Y6X1 66 aa1.16□□□□□ -2.22
TOPBP1-205ENST00000506779 PKD1P98161 4303 aa1.16□□□□□ -2.22
TOPBP1-205ENST00000506779 FAT2Q9NYQ8 4349 aa1.16□□□□□ -2.22
TOPBP1-205ENST00000506779 A8MUN3 132 aa1.15□□□□□ -2.23
TOPBP1-205ENST00000506779 P0C880 135 aa1.15□□□□□ -2.23
TOPBP1-205ENST00000506779 ACYP2P14621 99 aa1.15□□□□□ -2.23
TOPBP1-205ENST00000506779 C7orf65Q6ZTY9 151 aa1.15□□□□□ -2.23
TOPBP1-205ENST00000506779 V9GYY9 64 aa1.15□□□□□ -2.23
TOPBP1-205ENST00000506779 DNAH11Q96DT5 4516 aa1.15□□□□□ -2.23
TOPBP1-205ENST00000506779 LRP1BQ9NZR2 4599 aa1.15□□□□□ -2.23
TOPBP1-205ENST00000506779 DYNC1H1Q14204 4646 aaKnown RBP1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 HMCN2Q8NDA2 5059 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 C9orf92A6NGG3 77 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 MT1HL1P0DM35 61 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 TPRXLQ17RH7 258 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 LUZP6Q538Z0 58 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 SPTSSBQ8NFR3 76 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 RETNLBQ9BQ08 111 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 DNAH8Q96JB1 4490 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 MYCBP2O75592 4640 aa1.14□□□□□ -2.23
TOPBP1-205ENST00000506779 HSPG2P98160 4391 aa1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 CHKB-CPT1BH3BT56 60 aa1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 PSPHP1O15172 72 aa1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 SPINK7P58062 85 aa1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 RPL37P61927 97 aaKnown RBP1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 PCOTHQ58A44 107 aa1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 CYSTM1Q9H1C7 97 aa1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 RNF213Q63HN8 5207 aa1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 DNAH5Q8TE73 4624 aa1.13□□□□□ -2.23
TOPBP1-205ENST00000506779 HRES1P13985 223 aa1.12□□□□□ -2.23
TOPBP1-205ENST00000506779 ADM2Q7Z4H4 148 aa1.12□□□□□ -2.23
TOPBP1-205ENST00000506779 DMAC1Q96GE9 116 aa1.12□□□□□ -2.23
TOPBP1-205ENST00000506779 R4GN34 69 aa1.12□□□□□ -2.23
TOPBP1-205ENST00000506779 APOBP04114 4563 aaKnown RBP1.12□□□□□ -2.23
TOPBP1-205ENST00000506779 FAT4Q6V0I7 4981 aa1.11□□□□□ -2.23
TOPBP1-205ENST00000506779 Q1T7F1 81 aa1.11□□□□□ -2.23
TOPBP1-205ENST00000506779 COA5Q86WW8 74 aa1.11□□□□□ -2.23
TOPBP1-205ENST00000506779 PRR15LQ9BU68 103 aa1.11□□□□□ -2.23
TOPBP1-205ENST00000506779 RBM12B-AS1Q9P1G2 102 aa1.11□□□□□ -2.23
TOPBP1-205ENST00000506779 MUC2Q02817 5179 aa1.11□□□□□ -2.23
TOPBP1-205ENST00000506779 VPS13BQ7Z7G8 4022 aa1.11□□□□□ -2.23
TOPBP1-205ENST00000506779 C4orf26Q17RF5 130 aa1.1□□□□□ -2.23
TOPBP1-205ENST00000506779 COX6B2Q6YFQ2 88 aa1.1□□□□□ -2.23
TOPBP1-205ENST00000506779 FSIP2Q5CZC0 6907 aa1.1□□□□□ -2.23
TOPBP1-205ENST00000506779 FAT1Q14517 4588 aa1.09□□□□□ -2.23
TOPBP1-205ENST00000506779 FLG2Q5D862 2391 aaPredicted RBP1.08□□□□□ -2.24
TOPBP1-205ENST00000506779 A0A1B0GU69 56 aa1.08□□□□□ -2.24
TOPBP1-205ENST00000506779 H1FX-AS1Q4G0G2 97 aa1.08□□□□□ -2.24
TOPBP1-205ENST00000506779 LINC01558Q9Y6Z2 57 aa1.08□□□□□ -2.24
TOPBP1-205ENST00000506779 CSAG1Q6PB30 78 aa1.07□□□□□ -2.24
TOPBP1-205ENST00000506779 S4R3F8 94 aa1.07□□□□□ -2.24
TOPBP1-205ENST00000506779 LRP2P98164 4655 aa1.07□□□□□ -2.24
TOPBP1-205ENST00000506779 A6NED7 52 aa1.06□□□□□ -2.24
TOPBP1-205ENST00000506779 UQCR11O14957 56 aa1.06□□□□□ -2.24
TOPBP1-205ENST00000506779 PKHD1L1Q86WI1 4243 aa1.06□□□□□ -2.24
TOPBP1-205ENST00000506779 KRTAP25-1Q3LHN0 102 aa1.05□□□□□ -2.24
TOPBP1-205ENST00000506779 LCA10Q71F78 164 aa1.05□□□□□ -2.24
TOPBP1-205ENST00000506779 PRO0628Q9UI54 55 aa1.05□□□□□ -2.24
TOPBP1-205ENST00000506779 A0A1B0GU33 70 aa1.04□□□□□ -2.24
TOPBP1-205ENST00000506779 H0YAA0 97 aa1.04□□□□□ -2.24
TOPBP1-205ENST00000506779 K7ERS5 55 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms