RNA–Protein interactions for RNA: ENST00000506401.6

ITGA3-207, Transcript of integrin subunit alpha 3, humanhuman

TSL 2

Gene ITGA3, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA3-207ENST00000506401 SEC61GP60059 68 aa9.03□□□□□ -0.96
ITGA3-207ENST00000506401 CHKB-CPT1BH3BT56 60 aa8.99□□□□□ -0.97
ITGA3-207ENST00000506401 H1FX-AS1Q4G0G2 97 aa8.97□□□□□ -0.97
ITGA3-207ENST00000506401 PMAIP1Q13794 54 aa8.94□□□□□ -0.98
ITGA3-207ENST00000506401 S4R3F8 94 aa8.88□□□□□ -0.99
ITGA3-207ENST00000506401 UBR4Q5T4S7 5183 aa8.87□□□□□ -0.99
ITGA3-207ENST00000506401 MUC2Q02817 5179 aa8.86□□□□□ -0.99
ITGA3-207ENST00000506401 SPTSSBQ8NFR3 76 aa8.86□□□□□ -0.99
ITGA3-207ENST00000506401 PSPHP1O15172 72 aa8.85□□□□□ -0.99
ITGA3-207ENST00000506401 KRTAP19-2Q3LHN2 52 aa8.84□□□□□ -0.99
ITGA3-207ENST00000506401 LCA10Q71F78 164 aa8.83□□□□□ -1
ITGA3-207ENST00000506401 RNF213Q63HN8 5207 aa8.83□□□□□ -1
ITGA3-207ENST00000506401 Q5VV11 94 aa8.8□□□□□ -1
ITGA3-207ENST00000506401 KRTAP3-3Q9BYR6 98 aa8.77□□□□□ -1.01
ITGA3-207ENST00000506401 CSAG1Q6PB30 78 aa8.7□□□□□ -1.02
ITGA3-207ENST00000506401 LCE2CQ5TA81 110 aa8.7□□□□□ -1.02
ITGA3-207ENST00000506401 FLGP20930 4061 aaPredicted RBP8.67□□□□□ -1.02
ITGA3-207ENST00000506401 KTN1-AS1Q86SY8 53 aa8.67□□□□□ -1.02
ITGA3-207ENST00000506401 PRR15LQ9BU68 103 aa8.67□□□□□ -1.02
ITGA3-207ENST00000506401 LINC01558Q9Y6Z2 57 aa8.66□□□□□ -1.02
ITGA3-207ENST00000506401 A8MU10 97 aa8.63□□□□□ -1.03
ITGA3-207ENST00000506401 CDC42SE1Q9NRR8 79 aa8.59□□□□□ -1.03
ITGA3-207ENST00000506401 A0A1B0GU69 56 aa8.58□□□□□ -1.04
ITGA3-207ENST00000506401 A6NN06 94 aa8.58□□□□□ -1.04
ITGA3-207ENST00000506401 A6NED7 52 aa8.57□□□□□ -1.04
ITGA3-207ENST00000506401 FAT4Q6V0I7 4981 aa8.55□□□□□ -1.04
ITGA3-207ENST00000506401 MT1HP80294 61 aa8.54□□□□□ -1.04
ITGA3-207ENST00000506401 M0R2T5 61 aa8.52□□□□□ -1.04
ITGA3-207ENST00000506401 H0YAA0 97 aa8.47□□□□□ -1.05
ITGA3-207ENST00000506401 ADM2Q7Z4H4 148 aa8.46□□□□□ -1.06
ITGA3-207ENST00000506401 KRTAP3-2Q9BYR7 98 aa8.43□□□□□ -1.06
ITGA3-207ENST00000506401 KRTAP10-6P60371 365 aaPredicted RBP8.4□□□□□ -1.06
ITGA3-207ENST00000506401 P0C880 135 aa8.38□□□□□ -1.07
ITGA3-207ENST00000506401 A0A1B0GU33 70 aa8.36□□□□□ -1.07
ITGA3-207ENST00000506401 UQCR11O14957 56 aa8.31□□□□□ -1.08
ITGA3-207ENST00000506401 LCE2AQ5TA79 106 aaPredicted RBP8.26□□□□□ -1.09
ITGA3-207ENST00000506401 KRTAP9-8Q9BYQ0 159 aa8.22□□□□□ -1.09
ITGA3-207ENST00000506401 M0QZ58 72 aa8.2□□□□□ -1.1
ITGA3-207ENST00000506401 MIR22HGQ0VDD5 57 aa8.2□□□□□ -1.1
ITGA3-207ENST00000506401 LORP23490 312 aaPredicted RBP8.19□□□□□ -1.1
ITGA3-207ENST00000506401 SPATA8Q6RVD6 105 aa8.19□□□□□ -1.1
ITGA3-207ENST00000506401 R4GN34 69 aa8.19□□□□□ -1.1
ITGA3-207ENST00000506401 MT2AP02795 61 aa8.18□□□□□ -1.1
ITGA3-207ENST00000506401 CRIPTQ9P021 101 aa8.17□□□□□ -1.1
ITGA3-207ENST00000506401 KRTAP10-10P60014 251 aa8.16□□□□□ -1.1
ITGA3-207ENST00000506401 KRTAP13-4Q3LI77 160 aa8.15□□□□□ -1.1
ITGA3-207ENST00000506401 MT1FP04733 61 aa8.13□□□□□ -1.11
ITGA3-207ENST00000506401 PRAC1Q96KF2 57 aa8.09□□□□□ -1.11
ITGA3-207ENST00000506401 LINC01554Q52M75 96 aa8.07□□□□□ -1.12
ITGA3-207ENST00000506401 A0A0D9SG42 100 aa8.04□□□□□ -1.12
ITGA3-207ENST00000506401 SPRR2GQ9BYE4 73 aa7.99□□□□□ -1.13
ITGA3-207ENST00000506401 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
ITGA3-207ENST00000506401 KRTAP9-3Q9BYQ3 159 aa7.92□□□□□ -1.14
ITGA3-207ENST00000506401 K7ERS5 55 aa7.89□□□□□ -1.15
ITGA3-207ENST00000506401 SPINT4Q6UDR6 99 aa7.87□□□□□ -1.15
ITGA3-207ENST00000506401 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
ITGA3-207ENST00000506401 KRTAP12-2P59991 146 aa7.83□□□□□ -1.16
ITGA3-207ENST00000506401 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
ITGA3-207ENST00000506401 H3BS24 57 aa7.76□□□□□ -1.17
ITGA3-207ENST00000506401 PLAC4Q8WY50 150 aa7.75□□□□□ -1.17
ITGA3-207ENST00000506401 LCE2BO14633 110 aa7.71□□□□□ -1.18
ITGA3-207ENST00000506401 MT1BP07438 61 aa7.67□□□□□ -1.18
ITGA3-207ENST00000506401 KRTAP25-1Q3LHN0 102 aa7.66□□□□□ -1.18
ITGA3-207ENST00000506401 CAMK2N1Q7Z7J9 78 aa7.66□□□□□ -1.18
ITGA3-207ENST00000506401 LCE2DQ5TA82 110 aaPredicted RBP7.58□□□□□ -1.2
ITGA3-207ENST00000506401 ROMO1P60602 79 aa7.55□□□□□ -1.2
ITGA3-207ENST00000506401 USH2AO75445 5202 aa7.48□□□□□ -1.21
ITGA3-207ENST00000506401 C10orf95Q9H7T3 257 aa7.44□□□□□ -1.22
ITGA3-207ENST00000506401 MT1XP80297 61 aa7.41□□□□□ -1.22
ITGA3-207ENST00000506401 PRO2289Q9P1D8 64 aa7.41□□□□□ -1.22
ITGA3-207ENST00000506401 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
ITGA3-207ENST00000506401 KRTAP9-2Q9BYQ4 174 aa7.36□□□□□ -1.23
ITGA3-207ENST00000506401 TNP1P09430 55 aa7.28□□□□□ -1.24
ITGA3-207ENST00000506401 KRTAP19-6Q3LI70 58 aa7.28□□□□□ -1.24
ITGA3-207ENST00000506401 SSPOA2VEC9 5147 aa7.26□□□□□ -1.25
ITGA3-207ENST00000506401 FSIP2Q5CZC0 6907 aa7.16□□□□□ -1.26
ITGA3-207ENST00000506401 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
ITGA3-207ENST00000506401 KRTAP15-1Q3LI76 137 aa7.08□□□□□ -1.28
ITGA3-207ENST00000506401 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
ITGA3-207ENST00000506401 KRTAP10-12P60413 245 aa7.03□□□□□ -1.28
ITGA3-207ENST00000506401 KRTAP23-1A1A580 65 aa7.02□□□□□ -1.29
ITGA3-207ENST00000506401 PP632Q6XCG6 107 aa7.01□□□□□ -1.29
ITGA3-207ENST00000506401 KRTAP9-6A0A140TA67 174 aa6.98□□□□□ -1.29
ITGA3-207ENST00000506401 FCGBPQ9Y6R7 5405 aaPredicted RBP6.98□□□□□ -1.29
ITGA3-207ENST00000506401 NDUFAF8A1L188 74 aa6.95□□□□□ -1.3
ITGA3-207ENST00000506401 LCE3AQ5TA76 89 aa6.94□□□□□ -1.3
ITGA3-207ENST00000506401 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
ITGA3-207ENST00000506401 KRTAP4-8A0A0G2JLE6 195 aa6.84□□□□□ -1.31
ITGA3-207ENST00000506401 KRTAP4-8Q9BYQ9 185 aa6.84□□□□□ -1.31
ITGA3-207ENST00000506401 KRTAP8-1Q8IUC2 63 aa6.8□□□□□ -1.32
ITGA3-207ENST00000506401 KMT2DO14686 5537 aa6.76□□□□□ -1.33
ITGA3-207ENST00000506401 KRTAP12-3P60328 96 aa6.69□□□□□ -1.34
ITGA3-207ENST00000506401 KRTAP19-5Q3LI72 72 aa6.68□□□□□ -1.34
ITGA3-207ENST00000506401 KRTAP19-7Q3SYF9 63 aa6.6□□□□□ -1.35
ITGA3-207ENST00000506401 MACF1Q9UPN3 7388 aaKnown RBP6.57□□□□□ -1.36
ITGA3-207ENST00000506401 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.52□□□□□ -1.37
ITGA3-207ENST00000506401 MT1EP04732 61 aa6.5□□□□□ -1.37
ITGA3-207ENST00000506401 SPRR2FQ96RM1 72 aa6.47□□□□□ -1.37
ITGA3-207ENST00000506401 LUZP6Q538Z0 58 aa6.43□□□□□ -1.38
ITGA3-207ENST00000506401 KRTAP5-9P26371 169 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms