RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 KRTAP9-2Q9BYQ4 174 aa5.14□□□□□ -1.59
RFC1-210ENST00000505077 KLKP1Q107X0 134 aa5.13□□□□□ -1.59
RFC1-210ENST00000505077 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.12□□□□□ -1.59
RFC1-210ENST00000505077 C20orf197Q8N268 126 aa5.12□□□□□ -1.59
RFC1-210ENST00000505077 A8MUN3 132 aa5.11□□□□□ -1.59
RFC1-210ENST00000505077 KRTAP15-1Q3LI76 137 aa5.11□□□□□ -1.59
RFC1-210ENST00000505077 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
RFC1-210ENST00000505077 KRTAP9-6A0A140TA67 174 aa5.1□□□□□ -1.59
RFC1-210ENST00000505077 MT1HP80294 61 aa5.09□□□□□ -1.59
RFC1-210ENST00000505077 SNURFQ9Y675 71 aa5.09□□□□□ -1.59
RFC1-210ENST00000505077 NDUFC1O43677 76 aa5.08□□□□□ -1.6
RFC1-210ENST00000505077 SPANXA2-OT1Q8N9U9 137 aa5.06□□□□□ -1.6
RFC1-210ENST00000505077 DMAC1Q96GE9 116 aa5.05□□□□□ -1.6
RFC1-210ENST00000505077 KRTAP4-12Q9BQ66 201 aa5.05□□□□□ -1.6
RFC1-210ENST00000505077 M0R2T5 61 aa5.04□□□□□ -1.6
RFC1-210ENST00000505077 LCE3BQ5TA77 95 aa5.04□□□□□ -1.6
RFC1-210ENST00000505077 PRAC1Q96KF2 57 aa5.04□□□□□ -1.6
RFC1-210ENST00000505077 S4R3F8 94 aa5.02□□□□□ -1.61
RFC1-210ENST00000505077 H7BZZ5 65 aa4.99□□□□□ -1.61
RFC1-210ENST00000505077 CCDC179H3BU77 68 aa4.98□□□□□ -1.61
RFC1-210ENST00000505077 ACYP2P14621 99 aa4.98□□□□□ -1.61
RFC1-210ENST00000505077 LCA10Q71F78 164 aa4.97□□□□□ -1.61
RFC1-210ENST00000505077 CYSTM1Q9H1C7 97 aa4.96□□□□□ -1.62
RFC1-210ENST00000505077 KRTAP10-6P60371 365 aaPredicted RBP4.95□□□□□ -1.62
RFC1-210ENST00000505077 CSAG1Q6PB30 78 aa4.95□□□□□ -1.62
RFC1-210ENST00000505077 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
RFC1-210ENST00000505077 ATP5EP56381 51 aaPredicted RBP4.94□□□□□ -1.62
RFC1-210ENST00000505077 TMEM258P61165 79 aa4.9□□□□□ -1.63
RFC1-210ENST00000505077 KRTAP9-7A8MTY7 169 aa4.89□□□□□ -1.63
RFC1-210ENST00000505077 SPTSSBQ8NFR3 76 aa4.89□□□□□ -1.63
RFC1-210ENST00000505077 CHKB-CPT1BH3BT56 60 aa4.88□□□□□ -1.63
RFC1-210ENST00000505077 KRTAP9-9Q9BYP9 154 aa4.87□□□□□ -1.63
RFC1-210ENST00000505077 KRTAP9-4Q9BYQ2 154 aa4.87□□□□□ -1.63
RFC1-210ENST00000505077 KRTAP9-8Q9BYQ0 159 aa4.86□□□□□ -1.63
RFC1-210ENST00000505077 H0YAA0 97 aa4.85□□□□□ -1.63
RFC1-210ENST00000505077 COA5Q86WW8 74 aa4.85□□□□□ -1.63
RFC1-210ENST00000505077 KRTAP4-8A0A0G2JLE6 195 aa4.83□□□□□ -1.64
RFC1-210ENST00000505077 MT2AP02795 61 aa4.83□□□□□ -1.64
RFC1-210ENST00000505077 LCE4AQ5TA78 99 aa4.8□□□□□ -1.64
RFC1-210ENST00000505077 MT1FP04733 61 aa4.78□□□□□ -1.64
RFC1-210ENST00000505077 KRTAP10-10P60014 251 aa4.78□□□□□ -1.64
RFC1-210ENST00000505077 CRIPTQ9P021 101 aa4.75□□□□□ -1.65
RFC1-210ENST00000505077 ADM2Q7Z4H4 148 aa4.73□□□□□ -1.65
RFC1-210ENST00000505077 SERP1Q9Y6X1 66 aa4.72□□□□□ -1.65
RFC1-210ENST00000505077 LCE1DQ5T752 114 aa4.71□□□□□ -1.66
RFC1-210ENST00000505077 KRTAP9-3Q9BYQ3 159 aa4.7□□□□□ -1.66
RFC1-210ENST00000505077 KRTAP4-7Q9BYR0 210 aa4.67□□□□□ -1.66
RFC1-210ENST00000505077 P0C880 135 aa4.65□□□□□ -1.67
RFC1-210ENST00000505077 SPRR2GQ9BYE4 73 aa4.65□□□□□ -1.67
RFC1-210ENST00000505077 LCE5AQ5TCM9 118 aa4.62□□□□□ -1.67
RFC1-210ENST00000505077 R4GN34 69 aa4.62□□□□□ -1.67
RFC1-210ENST00000505077 A0A1B0GU69 56 aa4.61□□□□□ -1.67
RFC1-210ENST00000505077 RPS28P62857 69 aaKnown RBP4.61□□□□□ -1.67
RFC1-210ENST00000505077 PRR15LQ9BU68 103 aa4.61□□□□□ -1.67
RFC1-210ENST00000505077 V9GYY9 64 aa4.61□□□□□ -1.67
RFC1-210ENST00000505077 M0QZ58 72 aa4.6□□□□□ -1.67
RFC1-210ENST00000505077 LINC01558Q9Y6Z2 57 aa4.59□□□□□ -1.67
RFC1-210ENST00000505077 KRTAP4-9Q9BYQ8 210 aa4.57□□□□□ -1.68
RFC1-210ENST00000505077 SMIM26A0A096LP01 95 aa4.56□□□□□ -1.68
RFC1-210ENST00000505077 KRTAP19-8Q3LI54 63 aa4.56□□□□□ -1.68
RFC1-210ENST00000505077 Q5VV11 94 aa4.55□□□□□ -1.68
RFC1-210ENST00000505077 NDUFAF8A1L188 74 aa4.54□□□□□ -1.68
RFC1-210ENST00000505077 A0A1B0GU33 70 aa4.53□□□□□ -1.68
RFC1-210ENST00000505077 Q1T7F1 81 aa4.53□□□□□ -1.68
RFC1-210ENST00000505077 A6NN06 94 aa4.48□□□□□ -1.69
RFC1-210ENST00000505077 MT1BP07438 61 aa4.48□□□□□ -1.69
RFC1-210ENST00000505077 KRTAP13-4Q3LI77 160 aa4.47□□□□□ -1.69
RFC1-210ENST00000505077 LINC01554Q52M75 96 aa4.47□□□□□ -1.69
RFC1-210ENST00000505077 USH2AO75445 5202 aa4.46□□□□□ -1.7
RFC1-210ENST00000505077 CRCT1Q9UGL9 99 aa4.45□□□□□ -1.7
RFC1-210ENST00000505077 UQCR11O14957 56 aa4.44□□□□□ -1.7
RFC1-210ENST00000505077 PLAC4Q8WY50 150 aa4.44□□□□□ -1.7
RFC1-210ENST00000505077 KRTAP4-2Q9BYR5 136 aa4.44□□□□□ -1.7
RFC1-210ENST00000505077 FSIP2Q5CZC0 6907 aa4.44□□□□□ -1.7
RFC1-210ENST00000505077 PSPHP1O15172 72 aa4.42□□□□□ -1.7
RFC1-210ENST00000505077 KRTAP19-6Q3LI70 58 aa4.42□□□□□ -1.7
RFC1-210ENST00000505077 SPATA8Q6RVD6 105 aa4.42□□□□□ -1.7
RFC1-210ENST00000505077 SSPOA2VEC9 5147 aa4.41□□□□□ -1.7
RFC1-210ENST00000505077 KRTAP4-11Q9BYQ6 195 aa4.4□□□□□ -1.71
RFC1-210ENST00000505077 A0A0D9SG42 100 aa4.37□□□□□ -1.71
RFC1-210ENST00000505077 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
RFC1-210ENST00000505077 MIR22HGQ0VDD5 57 aa4.34□□□□□ -1.71
RFC1-210ENST00000505077 A6NED7 52 aa4.33□□□□□ -1.72
RFC1-210ENST00000505077 KRTAP10-5P60370 271 aa4.33□□□□□ -1.72
RFC1-210ENST00000505077 A8MU10 97 aa4.32□□□□□ -1.72
RFC1-210ENST00000505077 KRTAP12-1P59990 96 aa4.32□□□□□ -1.72
RFC1-210ENST00000505077 CAMK2N1Q7Z7J9 78 aa4.3□□□□□ -1.72
RFC1-210ENST00000505077 MT1XP80297 61 aa4.29□□□□□ -1.72
RFC1-210ENST00000505077 SPINT4Q6UDR6 99 aa4.29□□□□□ -1.72
RFC1-210ENST00000505077 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
RFC1-210ENST00000505077 K7ERS5 55 aa4.25□□□□□ -1.73
RFC1-210ENST00000505077 FCGBPQ9Y6R7 5405 aaPredicted RBP4.24□□□□□ -1.73
RFC1-210ENST00000505077 LCE1AQ5T7P2 110 aa4.22□□□□□ -1.73
RFC1-210ENST00000505077 CDC42SE1Q9NRR8 79 aa4.22□□□□□ -1.73
RFC1-210ENST00000505077 PRO0628Q9UI54 55 aa4.19□□□□□ -1.74
RFC1-210ENST00000505077 MT3P25713 68 aa4.13□□□□□ -1.75
RFC1-210ENST00000505077 KRTAP10-12P60413 245 aa4.1□□□□□ -1.75
RFC1-210ENST00000505077 MACF1Q9UPN3 7388 aaKnown RBP4.09□□□□□ -1.76
RFC1-210ENST00000505077 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
RFC1-210ENST00000505077 C10orf95Q9H7T3 257 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms