RNA–Protein interactions for RNA: ENST00000504687.5

LMNA-220, Transcript of lamin A/C, humanhuman

TSL 4

Gene LMNA, Length 546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-220ENST00000504687 H1FX-AS1Q4G0G2 97 aa6.69□□□□□ -1.34
LMNA-220ENST00000504687 KRTAP4-1Q9BYQ7 146 aa6.66□□□□□ -1.34
LMNA-220ENST00000504687 KRTAP3-3Q9BYR6 98 aa6.62□□□□□ -1.35
LMNA-220ENST00000504687 S4R3F8 94 aa6.62□□□□□ -1.35
LMNA-220ENST00000504687 Q5VV11 94 aa6.61□□□□□ -1.35
LMNA-220ENST00000504687 RNF213Q63HN8 5207 aa6.6□□□□□ -1.35
LMNA-220ENST00000504687 LCA10Q71F78 164 aa6.6□□□□□ -1.35
LMNA-220ENST00000504687 PRR15LQ9BU68 103 aa6.6□□□□□ -1.35
LMNA-220ENST00000504687 KRTAP19-2Q3LHN2 52 aa6.59□□□□□ -1.35
LMNA-220ENST00000504687 PSPHP1O15172 72 aa6.58□□□□□ -1.36
LMNA-220ENST00000504687 A0A1B0GU69 56 aa6.57□□□□□ -1.36
LMNA-220ENST00000504687 SEC61GP60059 68 aa6.53□□□□□ -1.36
LMNA-220ENST00000504687 CSAG1Q6PB30 78 aa6.5□□□□□ -1.37
LMNA-220ENST00000504687 H0YAA0 97 aa6.46□□□□□ -1.38
LMNA-220ENST00000504687 MUC2Q02817 5179 aa6.44□□□□□ -1.38
LMNA-220ENST00000504687 A6NED7 52 aa6.42□□□□□ -1.38
LMNA-220ENST00000504687 UQCR11O14957 56 aa6.41□□□□□ -1.38
LMNA-220ENST00000504687 KRTAP10-6P60371 365 aaPredicted RBP6.4□□□□□ -1.38
LMNA-220ENST00000504687 KRTAP3-2Q9BYR7 98 aa6.4□□□□□ -1.38
LMNA-220ENST00000504687 CDC42SE1Q9NRR8 79 aa6.39□□□□□ -1.39
LMNA-220ENST00000504687 LCE2CQ5TA81 110 aa6.38□□□□□ -1.39
LMNA-220ENST00000504687 SPATA8Q6RVD6 105 aa6.37□□□□□ -1.39
LMNA-220ENST00000504687 BRK1Q8WUW1 75 aa6.37□□□□□ -1.39
LMNA-220ENST00000504687 A0A1B0GU33 70 aa6.36□□□□□ -1.39
LMNA-220ENST00000504687 PRO0628Q9UI54 55 aa6.34□□□□□ -1.39
LMNA-220ENST00000504687 MIR22HGQ0VDD5 57 aa6.32□□□□□ -1.4
LMNA-220ENST00000504687 ADM2Q7Z4H4 148 aa6.31□□□□□ -1.4
LMNA-220ENST00000504687 FLGP20930 4061 aaPredicted RBP6.3□□□□□ -1.4
LMNA-220ENST00000504687 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
LMNA-220ENST00000504687 P0C880 135 aa6.28□□□□□ -1.4
LMNA-220ENST00000504687 A8MU10 97 aa6.23□□□□□ -1.41
LMNA-220ENST00000504687 M0QZ58 72 aa6.23□□□□□ -1.41
LMNA-220ENST00000504687 MT1HP80294 61 aa6.22□□□□□ -1.41
LMNA-220ENST00000504687 LCE2AQ5TA79 106 aaPredicted RBP6.21□□□□□ -1.42
LMNA-220ENST00000504687 SVIPQ8NHG7 77 aa6.2□□□□□ -1.42
LMNA-220ENST00000504687 KRTAP13-4Q3LI77 160 aa6.18□□□□□ -1.42
LMNA-220ENST00000504687 CRIPTQ9P021 101 aa6.15□□□□□ -1.42
LMNA-220ENST00000504687 M0R2T5 61 aa6.09□□□□□ -1.43
LMNA-220ENST00000504687 R4GN34 69 aa6.09□□□□□ -1.43
LMNA-220ENST00000504687 A6NN06 94 aa6.06□□□□□ -1.44
LMNA-220ENST00000504687 LORP23490 312 aaPredicted RBP6.06□□□□□ -1.44
LMNA-220ENST00000504687 PMAIP1Q13794 54 aa6.05□□□□□ -1.44
LMNA-220ENST00000504687 K7ERS5 55 aa6.04□□□□□ -1.44
LMNA-220ENST00000504687 KRTAP9-8Q9BYQ0 159 aa6.03□□□□□ -1.44
LMNA-220ENST00000504687 A0A0D9SG42 100 aa5.99□□□□□ -1.45
LMNA-220ENST00000504687 MT2AP02795 61 aa5.99□□□□□ -1.45
LMNA-220ENST00000504687 KRTAP12-1P59990 96 aa5.99□□□□□ -1.45
LMNA-220ENST00000504687 SPRR2GQ9BYE4 73 aa5.97□□□□□ -1.45
LMNA-220ENST00000504687 MT1FP04733 61 aa5.94□□□□□ -1.46
LMNA-220ENST00000504687 KRTAP12-2P59991 146 aa5.94□□□□□ -1.46
LMNA-220ENST00000504687 KRTAP10-10P60014 251 aa5.9□□□□□ -1.46
LMNA-220ENST00000504687 KRTAP19-1Q8IUB9 90 aa5.9□□□□□ -1.46
LMNA-220ENST00000504687 LINC01554Q52M75 96 aa5.88□□□□□ -1.47
LMNA-220ENST00000504687 SPINT4Q6UDR6 99 aa5.87□□□□□ -1.47
LMNA-220ENST00000504687 KTN1-AS1Q86SY8 53 aa5.86□□□□□ -1.47
LMNA-220ENST00000504687 KRTAP19-8Q3LI54 63 aa5.82□□□□□ -1.48
LMNA-220ENST00000504687 KRTAP9-2Q9BYQ4 174 aa5.82□□□□□ -1.48
LMNA-220ENST00000504687 KRTAP9-3Q9BYQ3 159 aa5.81□□□□□ -1.48
LMNA-220ENST00000504687 ROMO1P60602 79 aa5.8□□□□□ -1.48
LMNA-220ENST00000504687 LCE2DQ5TA82 110 aaPredicted RBP5.78□□□□□ -1.48
LMNA-220ENST00000504687 PLAC4Q8WY50 150 aa5.71□□□□□ -1.5
LMNA-220ENST00000504687 MT1BP07438 61 aa5.68□□□□□ -1.5
LMNA-220ENST00000504687 CAMK2N1Q7Z7J9 78 aa5.68□□□□□ -1.5
LMNA-220ENST00000504687 C10orf95Q9H7T3 257 aa5.65□□□□□ -1.5
LMNA-220ENST00000504687 LCE2BO14633 110 aa5.6□□□□□ -1.51
LMNA-220ENST00000504687 PRAC1Q96KF2 57 aa5.59□□□□□ -1.51
LMNA-220ENST00000504687 KRTAP25-1Q3LHN0 102 aa5.58□□□□□ -1.52
LMNA-220ENST00000504687 FSIP2Q5CZC0 6907 aa5.55□□□□□ -1.52
LMNA-220ENST00000504687 USH2AO75445 5202 aa5.55□□□□□ -1.52
LMNA-220ENST00000504687 CRCT1Q9UGL9 99 aa5.54□□□□□ -1.52
LMNA-220ENST00000504687 KRTAP9-6A0A140TA67 174 aa5.53□□□□□ -1.52
LMNA-220ENST00000504687 MT1XP80297 61 aa5.5□□□□□ -1.53
LMNA-220ENST00000504687 TNP1P09430 55 aa5.49□□□□□ -1.53
LMNA-220ENST00000504687 KRTAP10-5P60370 271 aa5.49□□□□□ -1.53
LMNA-220ENST00000504687 KRTAP23-1A1A580 65 aa5.47□□□□□ -1.53
LMNA-220ENST00000504687 PRO2289Q9P1D8 64 aa5.46□□□□□ -1.54
LMNA-220ENST00000504687 PP632Q6XCG6 107 aa5.43□□□□□ -1.54
LMNA-220ENST00000504687 SSPOA2VEC9 5147 aa5.43□□□□□ -1.54
LMNA-220ENST00000504687 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
LMNA-220ENST00000504687 FCGBPQ9Y6R7 5405 aaPredicted RBP5.27□□□□□ -1.57
LMNA-220ENST00000504687 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
LMNA-220ENST00000504687 KRTAP10-7P60409 375 aaPredicted RBP5.23□□□□□ -1.57
LMNA-220ENST00000504687 LCE3AQ5TA76 89 aa5.2□□□□□ -1.58
LMNA-220ENST00000504687 KRTAP8-1Q8IUC2 63 aa5.19□□□□□ -1.58
LMNA-220ENST00000504687 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.15□□□□□ -1.59
LMNA-220ENST00000504687 MACF1Q9UPN3 7388 aaKnown RBP5.04□□□□□ -1.6
LMNA-220ENST00000504687 KRTAP12-3P60328 96 aa5.02□□□□□ -1.61
LMNA-220ENST00000504687 KRTAP9-7A8MTY7 169 aa5□□□□□ -1.61
LMNA-220ENST00000504687 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
LMNA-220ENST00000504687 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
LMNA-220ENST00000504687 SYNE2Q8WXH0 6885 aaKnown RBP4.96□□□□□ -1.62
LMNA-220ENST00000504687 KRTAP15-1Q3LI76 137 aa4.95□□□□□ -1.62
LMNA-220ENST00000504687 KRTAP19-5Q3LI72 72 aa4.94□□□□□ -1.62
LMNA-220ENST00000504687 KRTAP19-7Q3SYF9 63 aa4.92□□□□□ -1.62
LMNA-220ENST00000504687 KRTAP19-4Q3LI73 84 aa4.9□□□□□ -1.63
LMNA-220ENST00000504687 KRTAP6-3Q3LI67 103 aa4.89□□□□□ -1.63
LMNA-220ENST00000504687 KMT2DO14686 5537 aa4.85□□□□□ -1.63
LMNA-220ENST00000504687 SPRR5A0A1B0GTR4 108 aa4.85□□□□□ -1.63
LMNA-220ENST00000504687 MT1EP04732 61 aa4.82□□□□□ -1.64
LMNA-220ENST00000504687 KRTAP5-9P26371 169 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms