RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 LCA10Q71F78 164 aa6.36□□□□□ -1.39
PDLIM7-212ENST00000504380 MT2AP02795 61 aa6.33□□□□□ -1.4
PDLIM7-212ENST00000504380 COX7CP15954 63 aa6.32□□□□□ -1.4
PDLIM7-212ENST00000504380 KRTAP3-3Q9BYR6 98 aa6.31□□□□□ -1.4
PDLIM7-212ENST00000504380 A8MUN3 132 aa6.29□□□□□ -1.4
PDLIM7-212ENST00000504380 MT1FP04733 61 aa6.29□□□□□ -1.4
PDLIM7-212ENST00000504380 ANAPC13Q9BS18 74 aa6.29□□□□□ -1.4
PDLIM7-212ENST00000504380 DMAC1Q96GE9 116 aa6.28□□□□□ -1.4
PDLIM7-212ENST00000504380 CSAG1Q6PB30 78 aa6.27□□□□□ -1.41
PDLIM7-212ENST00000504380 USH2AO75445 5202 aa6.27□□□□□ -1.41
PDLIM7-212ENST00000504380 KRTAP10-10P60014 251 aa6.26□□□□□ -1.41
PDLIM7-212ENST00000504380 SSPOA2VEC9 5147 aa6.26□□□□□ -1.41
PDLIM7-212ENST00000504380 CYSTM1Q9H1C7 97 aa6.24□□□□□ -1.41
PDLIM7-212ENST00000504380 NDUFC1O43677 76 aa6.22□□□□□ -1.41
PDLIM7-212ENST00000504380 CCDC179H3BU77 68 aa6.19□□□□□ -1.42
PDLIM7-212ENST00000504380 ACYP2P14621 99 aa6.18□□□□□ -1.42
PDLIM7-212ENST00000504380 SPANXA2-OT1Q8N9U9 137 aa6.18□□□□□ -1.42
PDLIM7-212ENST00000504380 FCGBPQ9Y6R7 5405 aaPredicted RBP6.17□□□□□ -1.42
PDLIM7-212ENST00000504380 KRTAP9-3Q9BYQ3 159 aa6.16□□□□□ -1.42
PDLIM7-212ENST00000504380 H7BZZ5 65 aa6.15□□□□□ -1.42
PDLIM7-212ENST00000504380 SYNE2Q8WXH0 6885 aaKnown RBP6.13□□□□□ -1.43
PDLIM7-212ENST00000504380 MACF1Q9UPN3 7388 aaKnown RBP6.1□□□□□ -1.43
PDLIM7-212ENST00000504380 CHKB-CPT1BH3BT56 60 aa6.09□□□□□ -1.43
PDLIM7-212ENST00000504380 LCE2BO14633 110 aa6.08□□□□□ -1.44
PDLIM7-212ENST00000504380 ADM2Q7Z4H4 148 aa6.07□□□□□ -1.44
PDLIM7-212ENST00000504380 COA5Q86WW8 74 aa6.05□□□□□ -1.44
PDLIM7-212ENST00000504380 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
PDLIM7-212ENST00000504380 H0YAA0 97 aa6.03□□□□□ -1.44
PDLIM7-212ENST00000504380 SPTSSBQ8NFR3 76 aa6.02□□□□□ -1.45
PDLIM7-212ENST00000504380 P0C880 135 aa5.99□□□□□ -1.45
PDLIM7-212ENST00000504380 KRTAP3-2Q9BYR7 98 aa5.99□□□□□ -1.45
PDLIM7-212ENST00000504380 SPRR2GQ9BYE4 73 aa5.94□□□□□ -1.46
PDLIM7-212ENST00000504380 KRTAP6-3Q3LI67 103 aa5.92□□□□□ -1.46
PDLIM7-212ENST00000504380 CRIPTQ9P021 101 aa5.92□□□□□ -1.46
PDLIM7-212ENST00000504380 ATP5EP56381 51 aaPredicted RBP5.89□□□□□ -1.47
PDLIM7-212ENST00000504380 TMEM258P61165 79 aa5.89□□□□□ -1.47
PDLIM7-212ENST00000504380 KRTAP19-8Q3LI54 63 aa5.86□□□□□ -1.47
PDLIM7-212ENST00000504380 MT1BP07438 61 aa5.85□□□□□ -1.47
PDLIM7-212ENST00000504380 M0QZ58 72 aa5.84□□□□□ -1.47
PDLIM7-212ENST00000504380 PCP4P48539 62 aa5.84□□□□□ -1.47
PDLIM7-212ENST00000504380 R4GN34 69 aa5.84□□□□□ -1.47
PDLIM7-212ENST00000504380 KRTAP19-6Q3LI70 58 aa5.83□□□□□ -1.48
PDLIM7-212ENST00000504380 Q5VV11 94 aa5.83□□□□□ -1.48
PDLIM7-212ENST00000504380 NEBP20929 6669 aa5.81□□□□□ -1.48
PDLIM7-212ENST00000504380 LINC01554Q52M75 96 aa5.77□□□□□ -1.49
PDLIM7-212ENST00000504380 SEC61GP60059 68 aa5.76□□□□□ -1.49
PDLIM7-212ENST00000504380 SERP1Q9Y6X1 66 aa5.76□□□□□ -1.49
PDLIM7-212ENST00000504380 KRTAP13-4Q3LI77 160 aa5.74□□□□□ -1.49
PDLIM7-212ENST00000504380 A0A1B0GU69 56 aa5.71□□□□□ -1.5
PDLIM7-212ENST00000504380 KRTAP20-1Q3LI63 56 aa5.7□□□□□ -1.5
PDLIM7-212ENST00000504380 A0A1B0GU33 70 aa5.67□□□□□ -1.5
PDLIM7-212ENST00000504380 SPATA8Q6RVD6 105 aa5.66□□□□□ -1.5
PDLIM7-212ENST00000504380 PLAC4Q8WY50 150 aa5.66□□□□□ -1.5
PDLIM7-212ENST00000504380 LINC01558Q9Y6Z2 57 aa5.66□□□□□ -1.5
PDLIM7-212ENST00000504380 A6NN06 94 aa5.63□□□□□ -1.51
PDLIM7-212ENST00000504380 MUC12Q9UKN1 5478 aa5.63□□□□□ -1.51
PDLIM7-212ENST00000504380 KRTAP10-5P60370 271 aa5.62□□□□□ -1.51
PDLIM7-212ENST00000504380 A0A0D9SG42 100 aa5.6□□□□□ -1.51
PDLIM7-212ENST00000504380 PRR15LQ9BU68 103 aa5.6□□□□□ -1.51
PDLIM7-212ENST00000504380 MT1XP80297 61 aa5.56□□□□□ -1.52
PDLIM7-212ENST00000504380 A8MU10 97 aa5.53□□□□□ -1.52
PDLIM7-212ENST00000504380 SMIM26A0A096LP01 95 aa5.51□□□□□ -1.53
PDLIM7-212ENST00000504380 PSPHP1O15172 72 aa5.5□□□□□ -1.53
PDLIM7-212ENST00000504380 RPS28P62857 69 aaKnown RBP5.5□□□□□ -1.53
PDLIM7-212ENST00000504380 Q1T7F1 81 aa5.5□□□□□ -1.53
PDLIM7-212ENST00000504380 SPINT4Q6UDR6 99 aa5.49□□□□□ -1.53
PDLIM7-212ENST00000504380 PRO2289Q9P1D8 64 aa5.49□□□□□ -1.53
PDLIM7-212ENST00000504380 V9GYY9 64 aa5.48□□□□□ -1.53
PDLIM7-212ENST00000504380 KRTAP12-1P59990 96 aa5.47□□□□□ -1.53
PDLIM7-212ENST00000504380 KRTAP12-2P59991 146 aa5.45□□□□□ -1.54
PDLIM7-212ENST00000504380 MDN1Q9NU22 5596 aa5.45□□□□□ -1.54
PDLIM7-212ENST00000504380 KRTAP2-3P0C7H8 128 aa5.44□□□□□ -1.54
PDLIM7-212ENST00000504380 CAMK2N1Q7Z7J9 78 aa5.44□□□□□ -1.54
PDLIM7-212ENST00000504380 KRTAP2-4Q9BYR9 128 aa5.44□□□□□ -1.54
PDLIM7-212ENST00000504380 UQCR11O14957 56 aa5.43□□□□□ -1.54
PDLIM7-212ENST00000504380 KRTAP5-9P26371 169 aa5.43□□□□□ -1.54
PDLIM7-212ENST00000504380 KMT2DO14686 5537 aa5.41□□□□□ -1.54
PDLIM7-212ENST00000504380 MIR22HGQ0VDD5 57 aa5.37□□□□□ -1.55
PDLIM7-212ENST00000504380 KRTAP10-7P60409 375 aaPredicted RBP5.34□□□□□ -1.55
PDLIM7-212ENST00000504380 A6NED7 52 aa5.3□□□□□ -1.56
PDLIM7-212ENST00000504380 KRTAP4-8A0A0G2JLE6 195 aa5.26□□□□□ -1.57
PDLIM7-212ENST00000504380 KRTAP10-12P60413 245 aa5.26□□□□□ -1.57
PDLIM7-212ENST00000504380 KRTAP4-8Q9BYQ9 185 aa5.26□□□□□ -1.57
PDLIM7-212ENST00000504380 KRTAP2-2Q9BYT5 123 aa5.24□□□□□ -1.57
PDLIM7-212ENST00000504380 KRTAP2-1Q9BYU5 128 aa5.24□□□□□ -1.57
PDLIM7-212ENST00000504380 C10orf95Q9H7T3 257 aa5.22□□□□□ -1.57
PDLIM7-212ENST00000504380 KRTAP8-1Q8IUC2 63 aa5.18□□□□□ -1.58
PDLIM7-212ENST00000504380 K7ERS5 55 aa5.15□□□□□ -1.59
PDLIM7-212ENST00000504380 GPR98Q8WXG9 6306 aa5.11□□□□□ -1.59
PDLIM7-212ENST00000504380 CDC42SE1Q9NRR8 79 aa5.11□□□□□ -1.59
PDLIM7-212ENST00000504380 SPRR2EP22531 72 aa5.1□□□□□ -1.59
PDLIM7-212ENST00000504380 SPRR2BP35325 72 aa5.1□□□□□ -1.59
PDLIM7-212ENST00000504380 SPRR2AP35326 72 aa5.1□□□□□ -1.59
PDLIM7-212ENST00000504380 SPRR2FQ96RM1 72 aa5.1□□□□□ -1.59
PDLIM7-212ENST00000504380 TNP1P09430 55 aa5.08□□□□□ -1.6
PDLIM7-212ENST00000504380 LCE1AQ5T7P2 110 aa5.02□□□□□ -1.61
PDLIM7-212ENST00000504380 LCE3AQ5TA76 89 aa5□□□□□ -1.61
PDLIM7-212ENST00000504380 KRTAP19-7Q3SYF9 63 aa4.96□□□□□ -1.62
PDLIM7-212ENST00000504380 KRTAP19-5Q3LI72 72 aa4.95□□□□□ -1.62
PDLIM7-212ENST00000504380 SPRR2DP22532 72 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms