RNA–Protein interactions for RNA: ENST00000504295.1

COPB2-204, Transcript of coatomer protein complex subunit beta 2, humanhuman

TSL 2

Gene COPB2, Length 3,524 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2-204ENST00000504295 PCOTHQ58A44 107 aa3.37□□□□□ -1.87
COPB2-204ENST00000504295 KIAA1109Q2LD37 5005 aa3.36□□□□□ -1.87
COPB2-204ENST00000504295 KRTAP10-8P60410 259 aa3.36□□□□□ -1.87
COPB2-204ENST00000504295 TYMSOSQ8TAI1 123 aa3.35□□□□□ -1.87
COPB2-204ENST00000504295 SPINK1P00995 79 aa3.33□□□□□ -1.88
COPB2-204ENST00000504295 ADM2Q7Z4H4 148 aa3.33□□□□□ -1.88
COPB2-204ENST00000504295 KRTAP19-2Q3LHN2 52 aa3.33□□□□□ -1.88
COPB2-204ENST00000504295 ABCA13Q86UQ4 5058 aa3.33□□□□□ -1.88
COPB2-204ENST00000504295 MT1HL1P0DM35 61 aa3.32□□□□□ -1.88
COPB2-204ENST00000504295 A6NED7 52 aa3.31□□□□□ -1.88
COPB2-204ENST00000504295 LINC00304Q8N9R0 145 aa3.31□□□□□ -1.88
COPB2-204ENST00000504295 FLG2Q5D862 2391 aaPredicted RBP3.3□□□□□ -1.88
COPB2-204ENST00000504295 KRTAP13-4Q3LI77 160 aa3.28□□□□□ -1.88
COPB2-204ENST00000504295 DMBT1Q9UGM3 2413 aaPredicted RBP3.27□□□□□ -1.89
COPB2-204ENST00000504295 UQCR11O14957 56 aa3.27□□□□□ -1.89
COPB2-204ENST00000504295 MIR22HGQ0VDD5 57 aa3.27□□□□□ -1.89
COPB2-204ENST00000504295 RETNLBQ9BQ08 111 aa3.26□□□□□ -1.89
COPB2-204ENST00000504295 LRP2P98164 4655 aa3.26□□□□□ -1.89
COPB2-204ENST00000504295 H1FX-AS1Q4G0G2 97 aa3.24□□□□□ -1.89
COPB2-204ENST00000504295 A0A1B0GU69 56 aa3.24□□□□□ -1.89
COPB2-204ENST00000504295 LINC01554Q52M75 96 aa3.23□□□□□ -1.89
COPB2-204ENST00000504295 KRTAP25-1Q3LHN0 102 aa3.23□□□□□ -1.89
COPB2-204ENST00000504295 PCLOQ9Y6V0 5065 aa3.23□□□□□ -1.89
COPB2-204ENST00000504295 PRAC1Q96KF2 57 aa3.22□□□□□ -1.89
COPB2-204ENST00000504295 COX6B2Q6YFQ2 88 aa3.21□□□□□ -1.9
COPB2-204ENST00000504295 LCE2BO14633 110 aa3.19□□□□□ -1.9
COPB2-204ENST00000504295 SPTSSBQ8NFR3 76 aa3.19□□□□□ -1.9
COPB2-204ENST00000504295 TPRXLQ17RH7 258 aa3.19□□□□□ -1.9
COPB2-204ENST00000504295 XP32Q5T750 250 aa3.18□□□□□ -1.9
COPB2-204ENST00000504295 KRTAP15-1Q3LI76 137 aa3.18□□□□□ -1.9
COPB2-204ENST00000504295 RPL37P61927 97 aaKnown RBP3.17□□□□□ -1.9
COPB2-204ENST00000504295 LCE2AQ5TA79 106 aaPredicted RBP3.17□□□□□ -1.9
COPB2-204ENST00000504295 P0C880 135 aa3.16□□□□□ -1.9
COPB2-204ENST00000504295 LOC100996750A0A140TA64 210 aa3.16□□□□□ -1.9
COPB2-204ENST00000504295 KRTAP4-6Q9BYQ5 205 aa3.16□□□□□ -1.9
COPB2-204ENST00000504295 CSAG1Q6PB30 78 aa3.15□□□□□ -1.9
COPB2-204ENST00000504295 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
COPB2-204ENST00000504295 ROMO1P60602 79 aa3.13□□□□□ -1.91
COPB2-204ENST00000504295 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
COPB2-204ENST00000504295 A0A1B0GU33 70 aa3.11□□□□□ -1.91
COPB2-204ENST00000504295 KRTAP12-2P59991 146 aa3.08□□□□□ -1.92
COPB2-204ENST00000504295 LCE2CQ5TA81 110 aa3.07□□□□□ -1.92
COPB2-204ENST00000504295 C9orf92A6NGG3 77 aa3.06□□□□□ -1.92
COPB2-204ENST00000504295 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
COPB2-204ENST00000504295 SPRR5A0A1B0GTR4 108 aa3.05□□□□□ -1.92
COPB2-204ENST00000504295 S4R3F8 94 aa2.99□□□□□ -1.93
COPB2-204ENST00000504295 KRTAP4-1Q9BYQ7 146 aa2.99□□□□□ -1.93
COPB2-204ENST00000504295 KRTAP23-1A1A580 65 aa2.98□□□□□ -1.93
COPB2-204ENST00000504295 UBR4Q5T4S7 5183 aa2.95□□□□□ -1.94
COPB2-204ENST00000504295 M0QZ58 72 aa2.95□□□□□ -1.94
COPB2-204ENST00000504295 C10orf95Q9H7T3 257 aa2.94□□□□□ -1.94
COPB2-204ENST00000504295 LORP23490 312 aaPredicted RBP2.93□□□□□ -1.94
COPB2-204ENST00000504295 CRIPTQ9P021 101 aa2.92□□□□□ -1.94
COPB2-204ENST00000504295 RNF213Q63HN8 5207 aa2.85□□□□□ -1.95
COPB2-204ENST00000504295 FAT4Q6V0I7 4981 aa2.85□□□□□ -1.95
COPB2-204ENST00000504295 M0R2T5 61 aa2.85□□□□□ -1.95
COPB2-204ENST00000504295 A0A0D9SG42 100 aa2.84□□□□□ -1.95
COPB2-204ENST00000504295 KRTAP4-8Q9BYQ9 185 aa2.84□□□□□ -1.96
COPB2-204ENST00000504295 MUC2Q02817 5179 aa2.83□□□□□ -1.96
COPB2-204ENST00000504295 SPRR2GQ9BYE4 73 aa2.83□□□□□ -1.96
COPB2-204ENST00000504295 MT1HP80294 61 aa2.81□□□□□ -1.96
COPB2-204ENST00000504295 KRTAP19-1Q8IUB9 90 aa2.79□□□□□ -1.96
COPB2-204ENST00000504295 KRTAP19-8Q3LI54 63 aa2.75□□□□□ -1.97
COPB2-204ENST00000504295 PP632Q6XCG6 107 aa2.73□□□□□ -1.97
COPB2-204ENST00000504295 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.72□□□□□ -1.97
COPB2-204ENST00000504295 KRTAP9-2Q9BYQ4 174 aa2.72□□□□□ -1.97
COPB2-204ENST00000504295 K7ERS5 55 aa2.72□□□□□ -1.97
COPB2-204ENST00000504295 SPINT4Q6UDR6 99 aa2.71□□□□□ -1.98
COPB2-204ENST00000504295 KRTAP9-8Q9BYQ0 159 aa2.7□□□□□ -1.98
COPB2-204ENST00000504295 KRTAP4-12Q9BQ66 201 aa2.69□□□□□ -1.98
COPB2-204ENST00000504295 KRTAP9-6A0A140TA67 174 aa2.68□□□□□ -1.98
COPB2-204ENST00000504295 KRTAP10-10P60014 251 aa2.68□□□□□ -1.98
COPB2-204ENST00000504295 KRTAP8-1Q8IUC2 63 aa2.66□□□□□ -1.98
COPB2-204ENST00000504295 MT2AP02795 61 aa2.66□□□□□ -1.98
COPB2-204ENST00000504295 KRTAP10-5P60370 271 aa2.64□□□□□ -1.99
COPB2-204ENST00000504295 PLAC4Q8WY50 150 aa2.64□□□□□ -1.99
COPB2-204ENST00000504295 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
COPB2-204ENST00000504295 MT1BP07438 61 aa2.64□□□□□ -1.99
COPB2-204ENST00000504295 NDUFAF8A1L188 74 aa2.63□□□□□ -1.99
COPB2-204ENST00000504295 MT1XP80297 61 aa2.62□□□□□ -1.99
COPB2-204ENST00000504295 MT1FP04733 61 aa2.61□□□□□ -1.99
COPB2-204ENST00000504295 KRTAP4-8A0A0G2JLE6 195 aa2.6□□□□□ -1.99
COPB2-204ENST00000504295 KRTAP9-9Q9BYP9 154 aa2.6□□□□□ -1.99
COPB2-204ENST00000504295 KRTAP9-4Q9BYQ2 154 aa2.6□□□□□ -1.99
COPB2-204ENST00000504295 KRTAP9-3Q9BYQ3 159 aa2.59□□□□□ -1.99
COPB2-204ENST00000504295 CAMK2N1Q7Z7J9 78 aa2.59□□□□□ -2
COPB2-204ENST00000504295 CRCT1Q9UGL9 99 aa2.58□□□□□ -2
COPB2-204ENST00000504295 R4GN34 69 aa2.56□□□□□ -2
COPB2-204ENST00000504295 HMCN1Q96RW7 5635 aa2.55□□□□□ -2
COPB2-204ENST00000504295 LUZP6Q538Z0 58 aa2.55□□□□□ -2
COPB2-204ENST00000504295 KRTAP4-7Q9BYR0 210 aa2.55□□□□□ -2
COPB2-204ENST00000504295 USH2AO75445 5202 aa2.53□□□□□ -2
COPB2-204ENST00000504295 LCE3BQ5TA77 95 aa2.51□□□□□ -2.01
COPB2-204ENST00000504295 LCE3AQ5TA76 89 aa2.5□□□□□ -2.01
COPB2-204ENST00000504295 SSPOA2VEC9 5147 aa2.5□□□□□ -2.01
COPB2-204ENST00000504295 KRTAP19-6Q3LI70 58 aa2.49□□□□□ -2.01
COPB2-204ENST00000504295 PRO2289Q9P1D8 64 aa2.48□□□□□ -2.01
COPB2-204ENST00000504295 KRTAP4-9Q9BYQ8 210 aa2.47□□□□□ -2.01
COPB2-204ENST00000504295 TNP1P09430 55 aa2.46□□□□□ -2.02
COPB2-204ENST00000504295 KRTAP2-3P0C7H8 128 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms