RNA–Protein interactions for RNA: ENST00000504227.5

CYSTM1-202, Transcript of cysteine rich transmembrane module containing 1, humanhuman

TSL 5

Gene CYSTM1, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-202ENST00000504227 PCP4P48539 62 aa6.72□□□□□ -1.33
CYSTM1-202ENST00000504227 LCA10Q71F78 164 aa6.72□□□□□ -1.33
CYSTM1-202ENST00000504227 CSAG1Q6PB30 78 aa6.7□□□□□ -1.34
CYSTM1-202ENST00000504227 CHKB-CPT1BH3BT56 60 aa6.66□□□□□ -1.34
CYSTM1-202ENST00000504227 ATP5EP56381 51 aaPredicted RBP6.66□□□□□ -1.34
CYSTM1-202ENST00000504227 KRTAP3-3Q9BYR6 98 aa6.66□□□□□ -1.34
CYSTM1-202ENST00000504227 TMEM258P61165 79 aa6.65□□□□□ -1.34
CYSTM1-202ENST00000504227 KRTAP10-6P60371 365 aaPredicted RBP6.64□□□□□ -1.35
CYSTM1-202ENST00000504227 SPTSSBQ8NFR3 76 aa6.62□□□□□ -1.35
CYSTM1-202ENST00000504227 COA5Q86WW8 74 aa6.61□□□□□ -1.35
CYSTM1-202ENST00000504227 LORP23490 312 aaPredicted RBP6.59□□□□□ -1.35
CYSTM1-202ENST00000504227 KRTAP9-8Q9BYQ0 159 aa6.53□□□□□ -1.36
CYSTM1-202ENST00000504227 MT2AP02795 61 aa6.5□□□□□ -1.37
CYSTM1-202ENST00000504227 H0YAA0 97 aa6.48□□□□□ -1.37
CYSTM1-202ENST00000504227 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
CYSTM1-202ENST00000504227 SERP1Q9Y6X1 66 aa6.46□□□□□ -1.38
CYSTM1-202ENST00000504227 MT1FP04733 61 aa6.44□□□□□ -1.38
CYSTM1-202ENST00000504227 ADM2Q7Z4H4 148 aa6.44□□□□□ -1.38
CYSTM1-202ENST00000504227 SEC61GP60059 68 aa6.36□□□□□ -1.39
CYSTM1-202ENST00000504227 KRTAP3-2Q9BYR7 98 aa6.36□□□□□ -1.39
CYSTM1-202ENST00000504227 P0C880 135 aa6.34□□□□□ -1.39
CYSTM1-202ENST00000504227 CRIPTQ9P021 101 aa6.34□□□□□ -1.39
CYSTM1-202ENST00000504227 RPS28P62857 69 aaKnown RBP6.31□□□□□ -1.4
CYSTM1-202ENST00000504227 KRTAP9-3Q9BYQ3 159 aa6.31□□□□□ -1.4
CYSTM1-202ENST00000504227 LCE2DQ5TA82 110 aaPredicted RBP6.29□□□□□ -1.4
CYSTM1-202ENST00000504227 A0A1B0GU69 56 aa6.28□□□□□ -1.4
CYSTM1-202ENST00000504227 LINC01558Q9Y6Z2 57 aa6.27□□□□□ -1.41
CYSTM1-202ENST00000504227 SMIM26A0A096LP01 95 aa6.25□□□□□ -1.41
CYSTM1-202ENST00000504227 PRR15LQ9BU68 103 aa6.25□□□□□ -1.41
CYSTM1-202ENST00000504227 R4GN34 69 aa6.25□□□□□ -1.41
CYSTM1-202ENST00000504227 M0QZ58 72 aa6.22□□□□□ -1.41
CYSTM1-202ENST00000504227 KRTAP19-1Q8IUB9 90 aa6.22□□□□□ -1.41
CYSTM1-202ENST00000504227 SPRR2GQ9BYE4 73 aa6.22□□□□□ -1.41
CYSTM1-202ENST00000504227 V9GYY9 64 aa6.22□□□□□ -1.41
CYSTM1-202ENST00000504227 A0A1B0GU33 70 aa6.19□□□□□ -1.42
CYSTM1-202ENST00000504227 LCE2BO14633 110 aa6.18□□□□□ -1.42
CYSTM1-202ENST00000504227 Q1T7F1 81 aa6.18□□□□□ -1.42
CYSTM1-202ENST00000504227 KRTAP9-2Q9BYQ4 174 aa6.18□□□□□ -1.42
CYSTM1-202ENST00000504227 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
CYSTM1-202ENST00000504227 LINC01554Q52M75 96 aa6.11□□□□□ -1.43
CYSTM1-202ENST00000504227 Q5VV11 94 aa6.11□□□□□ -1.43
CYSTM1-202ENST00000504227 USH2AO75445 5202 aa6.09□□□□□ -1.43
CYSTM1-202ENST00000504227 PSPHP1O15172 72 aa6.09□□□□□ -1.43
CYSTM1-202ENST00000504227 KRTAP13-4Q3LI77 160 aa6.09□□□□□ -1.43
CYSTM1-202ENST00000504227 SPATA8Q6RVD6 105 aa6.07□□□□□ -1.44
CYSTM1-202ENST00000504227 UQCR11O14957 56 aa6.04□□□□□ -1.44
CYSTM1-202ENST00000504227 MT1BP07438 61 aa6.03□□□□□ -1.44
CYSTM1-202ENST00000504227 PLAC4Q8WY50 150 aa6.02□□□□□ -1.45
CYSTM1-202ENST00000504227 A0A0D9SG42 100 aa6□□□□□ -1.45
CYSTM1-202ENST00000504227 A6NN06 94 aa5.99□□□□□ -1.45
CYSTM1-202ENST00000504227 MIR22HGQ0VDD5 57 aa5.95□□□□□ -1.46
CYSTM1-202ENST00000504227 FSIP2Q5CZC0 6907 aa5.95□□□□□ -1.46
CYSTM1-202ENST00000504227 CRCT1Q9UGL9 99 aa5.94□□□□□ -1.46
CYSTM1-202ENST00000504227 A6NED7 52 aa5.93□□□□□ -1.46
CYSTM1-202ENST00000504227 A8MU10 97 aa5.93□□□□□ -1.46
CYSTM1-202ENST00000504227 SSPOA2VEC9 5147 aa5.9□□□□□ -1.47
CYSTM1-202ENST00000504227 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
CYSTM1-202ENST00000504227 SPINT4Q6UDR6 99 aa5.89□□□□□ -1.47
CYSTM1-202ENST00000504227 KRTAP12-1P59990 96 aa5.87□□□□□ -1.47
CYSTM1-202ENST00000504227 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
CYSTM1-202ENST00000504227 CAMK2N1Q7Z7J9 78 aa5.83□□□□□ -1.48
CYSTM1-202ENST00000504227 KRTAP9-6A0A140TA67 174 aa5.82□□□□□ -1.48
CYSTM1-202ENST00000504227 PRO2289Q9P1D8 64 aa5.82□□□□□ -1.48
CYSTM1-202ENST00000504227 KRTAP10-5P60370 271 aa5.81□□□□□ -1.48
CYSTM1-202ENST00000504227 K7ERS5 55 aa5.77□□□□□ -1.49
CYSTM1-202ENST00000504227 MT1XP80297 61 aa5.77□□□□□ -1.49
CYSTM1-202ENST00000504227 FCGBPQ9Y6R7 5405 aaPredicted RBP5.77□□□□□ -1.49
CYSTM1-202ENST00000504227 CDC42SE1Q9NRR8 79 aa5.76□□□□□ -1.49
CYSTM1-202ENST00000504227 BRK1Q8WUW1 75 aa5.63□□□□□ -1.51
CYSTM1-202ENST00000504227 C10orf95Q9H7T3 257 aa5.57□□□□□ -1.52
CYSTM1-202ENST00000504227 KRTAP10-7P60409 375 aaPredicted RBP5.52□□□□□ -1.53
CYSTM1-202ENST00000504227 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.49□□□□□ -1.53
CYSTM1-202ENST00000504227 TNP1P09430 55 aa5.49□□□□□ -1.53
CYSTM1-202ENST00000504227 KRTAP10-12P60413 245 aa5.49□□□□□ -1.53
CYSTM1-202ENST00000504227 ROMO1P60602 79 aa5.45□□□□□ -1.54
CYSTM1-202ENST00000504227 MACF1Q9UPN3 7388 aaKnown RBP5.43□□□□□ -1.54
CYSTM1-202ENST00000504227 KRTAP25-1Q3LHN0 102 aa5.41□□□□□ -1.54
CYSTM1-202ENST00000504227 KRTAP4-8A0A0G2JLE6 195 aa5.37□□□□□ -1.55
CYSTM1-202ENST00000504227 KRTAP4-8Q9BYQ9 185 aa5.37□□□□□ -1.55
CYSTM1-202ENST00000504227 PRO0628Q9UI54 55 aa5.36□□□□□ -1.55
CYSTM1-202ENST00000504227 KRTAP8-1Q8IUC2 63 aa5.35□□□□□ -1.55
CYSTM1-202ENST00000504227 SYNE2Q8WXH0 6885 aaKnown RBP5.35□□□□□ -1.55
CYSTM1-202ENST00000504227 KMT2DO14686 5537 aa5.34□□□□□ -1.55
CYSTM1-202ENST00000504227 PMAIP1Q13794 54 aa5.33□□□□□ -1.56
CYSTM1-202ENST00000504227 KRTAP6-3Q3LI67 103 aa5.3□□□□□ -1.56
CYSTM1-202ENST00000504227 KRTAP9-7A8MTY7 169 aa5.29□□□□□ -1.56
CYSTM1-202ENST00000504227 LCE3AQ5TA76 89 aa5.28□□□□□ -1.56
CYSTM1-202ENST00000504227 KRTAP23-1A1A580 65 aa5.23□□□□□ -1.57
CYSTM1-202ENST00000504227 KRTAP5-9P26371 169 aa5.23□□□□□ -1.57
CYSTM1-202ENST00000504227 SPRR2FQ96RM1 72 aa5.21□□□□□ -1.58
CYSTM1-202ENST00000504227 KRTAP19-5Q3LI72 72 aa5.17□□□□□ -1.58
CYSTM1-202ENST00000504227 PP632Q6XCG6 107 aa5.17□□□□□ -1.58
CYSTM1-202ENST00000504227 KRTAP19-7Q3SYF9 63 aa5.14□□□□□ -1.59
CYSTM1-202ENST00000504227 MT1EP04732 61 aa5.09□□□□□ -1.59
CYSTM1-202ENST00000504227 KRTAP12-3P60328 96 aa5.09□□□□□ -1.59
CYSTM1-202ENST00000504227 MUC12Q9UKN1 5478 aa5.07□□□□□ -1.6
CYSTM1-202ENST00000504227 MDN1Q9NU22 5596 aa5.04□□□□□ -1.6
CYSTM1-202ENST00000504227 NEBP20929 6669 aa5.04□□□□□ -1.6
CYSTM1-202ENST00000504227 SPRR2EP22531 72 aa5.03□□□□□ -1.6
CYSTM1-202ENST00000504227 SPRR2BP35325 72 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms