RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 USH2AO75445 5202 aa8.06□□□□□ -1.12
SCLT1-204ENST00000503215 MT1FP04733 61 aa8.05□□□□□ -1.12
SCLT1-204ENST00000503215 RBM12B-AS1Q9P1G2 102 aa8.05□□□□□ -1.12
SCLT1-204ENST00000503215 TRAV22A0A0B4J277 110 aa8.04□□□□□ -1.12
SCLT1-204ENST00000503215 SSPOA2VEC9 5147 aa8.01□□□□□ -1.13
SCLT1-204ENST00000503215 K7EQZ3 153 aa8.01□□□□□ -1.13
SCLT1-204ENST00000503215 SPINK7P58062 85 aa7.99□□□□□ -1.13
SCLT1-204ENST00000503215 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
SCLT1-204ENST00000503215 KRTAP10-10P60014 251 aa7.97□□□□□ -1.13
SCLT1-204ENST00000503215 Q8N9P0 234 aaPredicted RBP7.97□□□□□ -1.13
SCLT1-204ENST00000503215 LINC00208Q96KT6 92 aa7.96□□□□□ -1.14
SCLT1-204ENST00000503215 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.95□□□□□ -1.14
SCLT1-204ENST00000503215 C8orf17Q9NRJ1 99 aa7.95□□□□□ -1.14
SCLT1-204ENST00000503215 A8MWP4 228 aa7.94□□□□□ -1.14
SCLT1-204ENST00000503215 LOC101927531A0A1B0GV80 90 aa7.93□□□□□ -1.14
SCLT1-204ENST00000503215 Q5VV11 94 aa7.92□□□□□ -1.14
SCLT1-204ENST00000503215 H0Y9P7 68 aa7.91□□□□□ -1.14
SCLT1-204ENST00000503215 PSPHP1O15172 72 aa7.91□□□□□ -1.14
SCLT1-204ENST00000503215 NDUFS5O43920 106 aa7.9□□□□□ -1.14
SCLT1-204ENST00000503215 CASC2Q6XLA1 102 aa7.9□□□□□ -1.14
SCLT1-204ENST00000503215 A8MUN3 132 aa7.89□□□□□ -1.15
SCLT1-204ENST00000503215 TP53AIP1Q9HCN2 124 aa7.89□□□□□ -1.15
SCLT1-204ENST00000503215 WFDC13Q8IUB5 93 aa7.87□□□□□ -1.15
SCLT1-204ENST00000503215 KRTAP19-1Q8IUB9 90 aa7.87□□□□□ -1.15
SCLT1-204ENST00000503215 FCGBPQ9Y6R7 5405 aaPredicted RBP7.87□□□□□ -1.15
SCLT1-204ENST00000503215 KRTAP9-7A8MTY7 169 aa7.86□□□□□ -1.15
SCLT1-204ENST00000503215 KTN1-AS1Q86SY8 53 aa7.85□□□□□ -1.15
SCLT1-204ENST00000503215 CHKB-CPT1BH3BT56 60 aa7.84□□□□□ -1.15
SCLT1-204ENST00000503215 MMP24-AS1A0A0U1RRL7 71 aa7.83□□□□□ -1.16
SCLT1-204ENST00000503215 CDC42SE1Q9NRR8 79 aa7.81□□□□□ -1.16
SCLT1-204ENST00000503215 LINC01558Q9Y6Z2 57 aa7.81□□□□□ -1.16
SCLT1-204ENST00000503215 PRR15LQ9BU68 103 aa7.8□□□□□ -1.16
SCLT1-204ENST00000503215 COA5Q86WW8 74 aa7.79□□□□□ -1.16
SCLT1-204ENST00000503215 MRPL34Q9BQ48 92 aaKnown RBP7.79□□□□□ -1.16
SCLT1-204ENST00000503215 A6NED7 52 aa7.74□□□□□ -1.17
SCLT1-204ENST00000503215 KRTAP4-8Q9BYQ9 185 aa7.74□□□□□ -1.17
SCLT1-204ENST00000503215 A6NN06 94 aa7.72□□□□□ -1.17
SCLT1-204ENST00000503215 Q5W150 140 aa7.72□□□□□ -1.17
SCLT1-204ENST00000503215 LCA10Q71F78 164 aa7.71□□□□□ -1.17
SCLT1-204ENST00000503215 H1FX-AS1Q4G0G2 97 aa7.7□□□□□ -1.18
SCLT1-204ENST00000503215 C7orf65Q6ZTY9 151 aa7.69□□□□□ -1.18
SCLT1-204ENST00000503215 IGKV2D-30A0A075B6S6 120 aa7.68□□□□□ -1.18
SCLT1-204ENST00000503215 IGKV2-30P06310 120 aa7.68□□□□□ -1.18
SCLT1-204ENST00000503215 KRTAP19-6Q3LI70 58 aa7.67□□□□□ -1.18
SCLT1-204ENST00000503215 SPTSSBQ8NFR3 76 aa7.65□□□□□ -1.18
SCLT1-204ENST00000503215 MACF1Q9UPN3 7388 aaKnown RBP7.61□□□□□ -1.19
SCLT1-204ENST00000503215 A8MU10 97 aa7.59□□□□□ -1.2
SCLT1-204ENST00000503215 ACYP2P14621 99 aa7.56□□□□□ -1.2
SCLT1-204ENST00000503215 SYNE2Q8WXH0 6885 aaKnown RBP7.55□□□□□ -1.2
SCLT1-204ENST00000503215 KRTAP4-12Q9BQ66 201 aa7.54□□□□□ -1.2
SCLT1-204ENST00000503215 KRTAP3-1Q9BYR8 98 aa7.51□□□□□ -1.21
SCLT1-204ENST00000503215 DMAC1Q96GE9 116 aa7.46□□□□□ -1.22
SCLT1-204ENST00000503215 SPATA8Q6RVD6 105 aa7.44□□□□□ -1.22
SCLT1-204ENST00000503215 H3BS24 57 aa7.42□□□□□ -1.22
SCLT1-204ENST00000503215 S4R3F8 94 aa7.38□□□□□ -1.23
SCLT1-204ENST00000503215 A0A1B0GU69 56 aa7.37□□□□□ -1.23
SCLT1-204ENST00000503215 UQCR11O14957 56 aa7.35□□□□□ -1.23
SCLT1-204ENST00000503215 MT1BP07438 61 aa7.35□□□□□ -1.23
SCLT1-204ENST00000503215 KRTAP6-3Q3LI67 103 aa7.35□□□□□ -1.23
SCLT1-204ENST00000503215 LCE3BQ5TA77 95 aa7.34□□□□□ -1.23
SCLT1-204ENST00000503215 CSAG1Q6PB30 78 aa7.33□□□□□ -1.24
SCLT1-204ENST00000503215 LINC01554Q52M75 96 aa7.3□□□□□ -1.24
SCLT1-204ENST00000503215 MIR22HGQ0VDD5 57 aa7.29□□□□□ -1.24
SCLT1-204ENST00000503215 SPRR2GQ9BYE4 73 aa7.29□□□□□ -1.24
SCLT1-204ENST00000503215 KRTAP19-8Q3LI54 63 aa7.28□□□□□ -1.24
SCLT1-204ENST00000503215 KRTAP9-9Q9BYP9 154 aa7.22□□□□□ -1.25
SCLT1-204ENST00000503215 KRTAP9-4Q9BYQ2 154 aa7.22□□□□□ -1.25
SCLT1-204ENST00000503215 KRTAP10-5P60370 271 aa7.17□□□□□ -1.26
SCLT1-204ENST00000503215 PRAC1Q96KF2 57 aa7.15□□□□□ -1.26
SCLT1-204ENST00000503215 NEBP20929 6669 aa7.12□□□□□ -1.27
SCLT1-204ENST00000503215 ADM2Q7Z4H4 148 aa7.08□□□□□ -1.28
SCLT1-204ENST00000503215 KRTAP4-8A0A0G2JLE6 195 aa7.06□□□□□ -1.28
SCLT1-204ENST00000503215 MUC12Q9UKN1 5478 aa7.05□□□□□ -1.28
SCLT1-204ENST00000503215 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
SCLT1-204ENST00000503215 KRTAP19-4Q3LI73 84 aa6.99□□□□□ -1.29
SCLT1-204ENST00000503215 KRTAP5-9P26371 169 aa6.97□□□□□ -1.29
SCLT1-204ENST00000503215 H0YAA0 97 aa6.96□□□□□ -1.29
SCLT1-204ENST00000503215 LCE4AQ5TA78 99 aa6.95□□□□□ -1.3
SCLT1-204ENST00000503215 KRTAP25-1Q3LHN0 102 aa6.94□□□□□ -1.3
SCLT1-204ENST00000503215 KMT2DO14686 5537 aa6.92□□□□□ -1.3
SCLT1-204ENST00000503215 K7ERS5 55 aa6.91□□□□□ -1.3
SCLT1-204ENST00000503215 LCE1DQ5T752 114 aa6.91□□□□□ -1.3
SCLT1-204ENST00000503215 A0A1B0GU33 70 aa6.9□□□□□ -1.31
SCLT1-204ENST00000503215 KRTAP20-1Q3LI63 56 aa6.87□□□□□ -1.31
SCLT1-204ENST00000503215 MT1XP80297 61 aa6.86□□□□□ -1.31
SCLT1-204ENST00000503215 MDN1Q9NU22 5596 aa6.84□□□□□ -1.31
SCLT1-204ENST00000503215 P0C880 135 aa6.82□□□□□ -1.32
SCLT1-204ENST00000503215 ROMO1P60602 79 aa6.82□□□□□ -1.32
SCLT1-204ENST00000503215 KRTAP4-7Q9BYR0 210 aa6.79□□□□□ -1.32
SCLT1-204ENST00000503215 PLAC4Q8WY50 150 aa6.76□□□□□ -1.33
SCLT1-204ENST00000503215 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
SCLT1-204ENST00000503215 SPRR2FQ96RM1 72 aa6.75□□□□□ -1.33
SCLT1-204ENST00000503215 R4GN34 69 aa6.74□□□□□ -1.33
SCLT1-204ENST00000503215 M0QZ58 72 aa6.71□□□□□ -1.33
SCLT1-204ENST00000503215 KRTAP4-9Q9BYQ8 210 aa6.69□□□□□ -1.34
SCLT1-204ENST00000503215 SPRR2EP22531 72 aa6.68□□□□□ -1.34
SCLT1-204ENST00000503215 SPRR2BP35325 72 aa6.68□□□□□ -1.34
SCLT1-204ENST00000503215 SPRR2AP35326 72 aa6.68□□□□□ -1.34
SCLT1-204ENST00000503215 KRTAP8-1Q8IUC2 63 aa6.67□□□□□ -1.34
SCLT1-204ENST00000503215 KRTAP2-3P0C7H8 128 aa6.65□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 164.6 ms