RNA–Protein interactions for RNA: ENST00000498803.5

SPIRE1-211, Transcript of spire type actin nucleation factor 1, humanhuman

TSL 4

Gene SPIRE1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-211ENST00000498803 LINC01558Q9Y6Z2 57 aa4.25□□□□□ -1.73
SPIRE1-211ENST00000498803 S4R3F8 94 aa4.25□□□□□ -1.73
SPIRE1-211ENST00000498803 HERC1Q15751 4861 aa4.24□□□□□ -1.73
SPIRE1-211ENST00000498803 HMCN2Q8NDA2 5059 aa4.23□□□□□ -1.73
SPIRE1-211ENST00000498803 SEC61GP60059 68 aa4.23□□□□□ -1.73
SPIRE1-211ENST00000498803 SVIPQ8NHG7 77 aa4.22□□□□□ -1.73
SPIRE1-211ENST00000498803 KRTAP4-1Q9BYQ7 146 aa4.22□□□□□ -1.73
SPIRE1-211ENST00000498803 MUC17Q685J3 4493 aa4.22□□□□□ -1.73
SPIRE1-211ENST00000498803 A0A1B0GU69 56 aa4.2□□□□□ -1.74
SPIRE1-211ENST00000498803 LCA10Q71F78 164 aa4.2□□□□□ -1.74
SPIRE1-211ENST00000498803 CSAG1Q6PB30 78 aa4.19□□□□□ -1.74
SPIRE1-211ENST00000498803 PSPHP1O15172 72 aa4.18□□□□□ -1.74
SPIRE1-211ENST00000498803 Q5VV11 94 aa4.15□□□□□ -1.75
SPIRE1-211ENST00000498803 KRTAP19-2Q3LHN2 52 aa4.13□□□□□ -1.75
SPIRE1-211ENST00000498803 H0YAA0 97 aa4.11□□□□□ -1.75
SPIRE1-211ENST00000498803 A6NED7 52 aa4.1□□□□□ -1.75
SPIRE1-211ENST00000498803 UQCR11O14957 56 aa4.09□□□□□ -1.75
SPIRE1-211ENST00000498803 A0A1B0GU33 70 aa4.07□□□□□ -1.76
SPIRE1-211ENST00000498803 ADM2Q7Z4H4 148 aa4.05□□□□□ -1.76
SPIRE1-211ENST00000498803 FLGP20930 4061 aaPredicted RBP4.04□□□□□ -1.76
SPIRE1-211ENST00000498803 LCE2BO14633 110 aa4.04□□□□□ -1.76
SPIRE1-211ENST00000498803 BRK1Q8WUW1 75 aa4.04□□□□□ -1.76
SPIRE1-211ENST00000498803 KRTAP10-6P60371 365 aaPredicted RBP4.03□□□□□ -1.76
SPIRE1-211ENST00000498803 LCE2CQ5TA81 110 aa4.03□□□□□ -1.76
SPIRE1-211ENST00000498803 CDC42SE1Q9NRR8 79 aa4.03□□□□□ -1.76
SPIRE1-211ENST00000498803 MIR22HGQ0VDD5 57 aa4.02□□□□□ -1.77
SPIRE1-211ENST00000498803 SPATA8Q6RVD6 105 aa4.02□□□□□ -1.77
SPIRE1-211ENST00000498803 UBR4Q5T4S7 5183 aa4.01□□□□□ -1.77
SPIRE1-211ENST00000498803 MUC2Q02817 5179 aa4.01□□□□□ -1.77
SPIRE1-211ENST00000498803 RNF213Q63HN8 5207 aa4□□□□□ -1.77
SPIRE1-211ENST00000498803 M0R2T5 61 aa4□□□□□ -1.77
SPIRE1-211ENST00000498803 M0QZ58 72 aa3.99□□□□□ -1.77
SPIRE1-211ENST00000498803 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
SPIRE1-211ENST00000498803 P0C880 135 aa3.98□□□□□ -1.77
SPIRE1-211ENST00000498803 MT1HP80294 61 aa3.97□□□□□ -1.77
SPIRE1-211ENST00000498803 CRIPTQ9P021 101 aa3.96□□□□□ -1.78
SPIRE1-211ENST00000498803 R4GN34 69 aa3.94□□□□□ -1.78
SPIRE1-211ENST00000498803 K7ERS5 55 aa3.92□□□□□ -1.78
SPIRE1-211ENST00000498803 KRTAP13-4Q3LI77 160 aa3.88□□□□□ -1.79
SPIRE1-211ENST00000498803 A8MU10 97 aa3.87□□□□□ -1.79
SPIRE1-211ENST00000498803 FAT4Q6V0I7 4981 aa3.87□□□□□ -1.79
SPIRE1-211ENST00000498803 A0A0D9SG42 100 aa3.85□□□□□ -1.79
SPIRE1-211ENST00000498803 PMAIP1Q13794 54 aa3.85□□□□□ -1.79
SPIRE1-211ENST00000498803 A6NN06 94 aa3.83□□□□□ -1.8
SPIRE1-211ENST00000498803 MT2AP02795 61 aa3.82□□□□□ -1.8
SPIRE1-211ENST00000498803 LORP23490 312 aaPredicted RBP3.82□□□□□ -1.8
SPIRE1-211ENST00000498803 KRTAP10-10P60014 251 aa3.82□□□□□ -1.8
SPIRE1-211ENST00000498803 LINC01554Q52M75 96 aa3.82□□□□□ -1.8
SPIRE1-211ENST00000498803 KRTAP9-8Q9BYQ0 159 aa3.82□□□□□ -1.8
SPIRE1-211ENST00000498803 LCE2AQ5TA79 106 aaPredicted RBP3.81□□□□□ -1.8
SPIRE1-211ENST00000498803 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
SPIRE1-211ENST00000498803 SPRR2GQ9BYE4 73 aa3.79□□□□□ -1.8
SPIRE1-211ENST00000498803 MT1FP04733 61 aa3.78□□□□□ -1.8
SPIRE1-211ENST00000498803 KRTAP12-1P59990 96 aa3.78□□□□□ -1.8
SPIRE1-211ENST00000498803 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
SPIRE1-211ENST00000498803 KRTAP4-6Q9BYQ5 205 aa3.77□□□□□ -1.81
SPIRE1-211ENST00000498803 KRTAP12-2P59991 146 aa3.75□□□□□ -1.81
SPIRE1-211ENST00000498803 KRTAP19-1Q8IUB9 90 aa3.73□□□□□ -1.81
SPIRE1-211ENST00000498803 PLAC4Q8WY50 150 aa3.72□□□□□ -1.81
SPIRE1-211ENST00000498803 ROMO1P60602 79 aa3.7□□□□□ -1.82
SPIRE1-211ENST00000498803 CAMK2N1Q7Z7J9 78 aa3.7□□□□□ -1.82
SPIRE1-211ENST00000498803 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
SPIRE1-211ENST00000498803 KTN1-AS1Q86SY8 53 aa3.69□□□□□ -1.82
SPIRE1-211ENST00000498803 KRTAP9-3Q9BYQ3 159 aa3.69□□□□□ -1.82
SPIRE1-211ENST00000498803 MT1BP07438 61 aa3.59□□□□□ -1.83
SPIRE1-211ENST00000498803 KRTAP25-1Q3LHN0 102 aa3.57□□□□□ -1.84
SPIRE1-211ENST00000498803 C10orf95Q9H7T3 257 aa3.56□□□□□ -1.84
SPIRE1-211ENST00000498803 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
SPIRE1-211ENST00000498803 TNP1P09430 55 aa3.53□□□□□ -1.84
SPIRE1-211ENST00000498803 PRAC1Q96KF2 57 aa3.51□□□□□ -1.85
SPIRE1-211ENST00000498803 H3BS24 57 aa3.49□□□□□ -1.85
SPIRE1-211ENST00000498803 MT1XP80297 61 aa3.48□□□□□ -1.85
SPIRE1-211ENST00000498803 PP632Q6XCG6 107 aa3.48□□□□□ -1.85
SPIRE1-211ENST00000498803 KRTAP23-1A1A580 65 aa3.47□□□□□ -1.85
SPIRE1-211ENST00000498803 KRTAP10-5P60370 271 aa3.47□□□□□ -1.85
SPIRE1-211ENST00000498803 USH2AO75445 5202 aa3.4□□□□□ -1.86
SPIRE1-211ENST00000498803 KRTAP19-6Q3LI70 58 aa3.4□□□□□ -1.87
SPIRE1-211ENST00000498803 KRTAP4-8Q9BYQ9 185 aa3.4□□□□□ -1.87
SPIRE1-211ENST00000498803 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.35□□□□□ -1.87
SPIRE1-211ENST00000498803 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
SPIRE1-211ENST00000498803 KRTAP9-2Q9BYQ4 174 aa3.35□□□□□ -1.87
SPIRE1-211ENST00000498803 KRTAP9-6A0A140TA67 174 aa3.32□□□□□ -1.88
SPIRE1-211ENST00000498803 KRTAP10-7P60409 375 aaPredicted RBP3.32□□□□□ -1.88
SPIRE1-211ENST00000498803 LCE3AQ5TA76 89 aa3.3□□□□□ -1.88
SPIRE1-211ENST00000498803 SSPOA2VEC9 5147 aa3.28□□□□□ -1.88
SPIRE1-211ENST00000498803 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
SPIRE1-211ENST00000498803 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
SPIRE1-211ENST00000498803 CRCT1Q9UGL9 99 aa3.22□□□□□ -1.89
SPIRE1-211ENST00000498803 A0A0A0MQY5 61 aa3.21□□□□□ -1.9
SPIRE1-211ENST00000498803 KRTAP12-3P60328 96 aa3.21□□□□□ -1.9
SPIRE1-211ENST00000498803 LCE3BQ5TA77 95 aa3.21□□□□□ -1.9
SPIRE1-211ENST00000498803 KRTAP4-12Q9BQ66 201 aa3.21□□□□□ -1.9
SPIRE1-211ENST00000498803 KRTAP9-9Q9BYP9 154 aa3.18□□□□□ -1.9
SPIRE1-211ENST00000498803 KRTAP9-4Q9BYQ2 154 aa3.18□□□□□ -1.9
SPIRE1-211ENST00000498803 KRTAP4-8A0A0G2JLE6 195 aa3.16□□□□□ -1.9
SPIRE1-211ENST00000498803 KRTAP15-1Q3LI76 137 aa3.16□□□□□ -1.9
SPIRE1-211ENST00000498803 FCGBPQ9Y6R7 5405 aaPredicted RBP3.16□□□□□ -1.9
SPIRE1-211ENST00000498803 KRTAP19-5Q3LI72 72 aa3.15□□□□□ -1.91
SPIRE1-211ENST00000498803 KRTAP19-4Q3LI73 84 aa3.14□□□□□ -1.91
SPIRE1-211ENST00000498803 KRTAP19-7Q3SYF9 63 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms