RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 SMIM26A0A096LP01 95 aa8.23□□□□□ -1.09
LMNA-217ENST00000498722 M0R2T5 61 aa8.23□□□□□ -1.09
LMNA-217ENST00000498722 C4orf26Q17RF5 130 aa8.23□□□□□ -1.09
LMNA-217ENST00000498722 RBM12B-AS1Q9P1G2 102 aa8.19□□□□□ -1.1
LMNA-217ENST00000498722 CHKB-CPT1BH3BT56 60 aa8.17□□□□□ -1.1
LMNA-217ENST00000498722 FLGP20930 4061 aaPredicted RBP8.1□□□□□ -1.11
LMNA-217ENST00000498722 MPLKIPQ8TAP9 179 aa8.09□□□□□ -1.11
LMNA-217ENST00000498722 KRTAP3-1Q9BYR8 98 aa8.09□□□□□ -1.11
LMNA-217ENST00000498722 V9GYY9 64 aa8.09□□□□□ -1.11
LMNA-217ENST00000498722 KRTAP10-6P60371 365 aaPredicted RBP8.07□□□□□ -1.12
LMNA-217ENST00000498722 Q1T7F1 81 aa8.05□□□□□ -1.12
LMNA-217ENST00000498722 SPTSSBQ8NFR3 76 aa8.05□□□□□ -1.12
LMNA-217ENST00000498722 LCE2DQ5TA82 110 aaPredicted RBP8.03□□□□□ -1.12
LMNA-217ENST00000498722 LORP23490 312 aaPredicted RBP8.03□□□□□ -1.12
LMNA-217ENST00000498722 H1FX-AS1Q4G0G2 97 aa7.98□□□□□ -1.13
LMNA-217ENST00000498722 LINC01558Q9Y6Z2 57 aa7.98□□□□□ -1.13
LMNA-217ENST00000498722 CRCT1Q9UGL9 99 aa7.95□□□□□ -1.14
LMNA-217ENST00000498722 FSIP2Q5CZC0 6907 aa7.94□□□□□ -1.14
LMNA-217ENST00000498722 S4R3F8 94 aa7.94□□□□□ -1.14
LMNA-217ENST00000498722 PRR15LQ9BU68 103 aa7.88□□□□□ -1.15
LMNA-217ENST00000498722 LCA10Q71F78 164 aa7.87□□□□□ -1.15
LMNA-217ENST00000498722 PSPHP1O15172 72 aa7.85□□□□□ -1.15
LMNA-217ENST00000498722 A0A1B0GU69 56 aa7.84□□□□□ -1.15
LMNA-217ENST00000498722 SEC61GP60059 68 aa7.83□□□□□ -1.16
LMNA-217ENST00000498722 KRTAP9-8Q9BYQ0 159 aa7.82□□□□□ -1.16
LMNA-217ENST00000498722 KRTAP3-3Q9BYR6 98 aa7.82□□□□□ -1.16
LMNA-217ENST00000498722 Q5VV11 94 aa7.79□□□□□ -1.16
LMNA-217ENST00000498722 MT2AP02795 61 aa7.77□□□□□ -1.17
LMNA-217ENST00000498722 CSAG1Q6PB30 78 aa7.76□□□□□ -1.17
LMNA-217ENST00000498722 KRTAP10-10P60014 251 aa7.74□□□□□ -1.17
LMNA-217ENST00000498722 MT1FP04733 61 aa7.71□□□□□ -1.18
LMNA-217ENST00000498722 A6NED7 52 aa7.66□□□□□ -1.18
LMNA-217ENST00000498722 UQCR11O14957 56 aa7.62□□□□□ -1.19
LMNA-217ENST00000498722 H0YAA0 97 aa7.6□□□□□ -1.19
LMNA-217ENST00000498722 BRK1Q8WUW1 75 aa7.59□□□□□ -1.19
LMNA-217ENST00000498722 A0A1B0GU33 70 aa7.57□□□□□ -1.2
LMNA-217ENST00000498722 ADM2Q7Z4H4 148 aa7.56□□□□□ -1.2
LMNA-217ENST00000498722 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
LMNA-217ENST00000498722 KRTAP3-2Q9BYR7 98 aa7.54□□□□□ -1.2
LMNA-217ENST00000498722 CDC42SE1Q9NRR8 79 aa7.54□□□□□ -1.2
LMNA-217ENST00000498722 MIR22HGQ0VDD5 57 aa7.52□□□□□ -1.2
LMNA-217ENST00000498722 SPATA8Q6RVD6 105 aa7.51□□□□□ -1.21
LMNA-217ENST00000498722 LCE2BO14633 110 aa7.5□□□□□ -1.21
LMNA-217ENST00000498722 P0C880 135 aa7.48□□□□□ -1.21
LMNA-217ENST00000498722 PRO0628Q9UI54 55 aa7.47□□□□□ -1.21
LMNA-217ENST00000498722 USH2AO75445 5202 aa7.43□□□□□ -1.22
LMNA-217ENST00000498722 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.41□□□□□ -1.22
LMNA-217ENST00000498722 KRTAP9-7A8MTY7 169 aa7.4□□□□□ -1.22
LMNA-217ENST00000498722 A8MU10 97 aa7.38□□□□□ -1.23
LMNA-217ENST00000498722 M0QZ58 72 aa7.38□□□□□ -1.23
LMNA-217ENST00000498722 SSPOA2VEC9 5147 aa7.35□□□□□ -1.23
LMNA-217ENST00000498722 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
LMNA-217ENST00000498722 R4GN34 69 aa7.31□□□□□ -1.24
LMNA-217ENST00000498722 KRTAP19-1Q8IUB9 90 aa7.29□□□□□ -1.24
LMNA-217ENST00000498722 CRIPTQ9P021 101 aa7.28□□□□□ -1.24
LMNA-217ENST00000498722 K7ERS5 55 aa7.25□□□□□ -1.25
LMNA-217ENST00000498722 A0A0D9SG42 100 aa7.23□□□□□ -1.25
LMNA-217ENST00000498722 FCGBPQ9Y6R7 5405 aaPredicted RBP7.22□□□□□ -1.25
LMNA-217ENST00000498722 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
LMNA-217ENST00000498722 PMAIP1Q13794 54 aa7.19□□□□□ -1.26
LMNA-217ENST00000498722 KRTAP19-6Q3LI70 58 aa7.19□□□□□ -1.26
LMNA-217ENST00000498722 LINC01554Q52M75 96 aa7.13□□□□□ -1.27
LMNA-217ENST00000498722 A6NN06 94 aa7.12□□□□□ -1.27
LMNA-217ENST00000498722 KRTAP19-8Q3LI54 63 aa7.12□□□□□ -1.27
LMNA-217ENST00000498722 MT1BP07438 61 aa7.11□□□□□ -1.27
LMNA-217ENST00000498722 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
LMNA-217ENST00000498722 SPINT4Q6UDR6 99 aa7.09□□□□□ -1.27
LMNA-217ENST00000498722 MACF1Q9UPN3 7388 aaKnown RBP7.09□□□□□ -1.27
LMNA-217ENST00000498722 KRTAP12-2P59991 146 aa7.05□□□□□ -1.28
LMNA-217ENST00000498722 SYNE2Q8WXH0 6885 aaKnown RBP7.02□□□□□ -1.29
LMNA-217ENST00000498722 KTN1-AS1Q86SY8 53 aa6.92□□□□□ -1.3
LMNA-217ENST00000498722 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
LMNA-217ENST00000498722 KRTAP10-5P60370 271 aa6.91□□□□□ -1.3
LMNA-217ENST00000498722 ROMO1P60602 79 aa6.89□□□□□ -1.31
LMNA-217ENST00000498722 SVIPQ8NHG7 77 aa6.89□□□□□ -1.31
LMNA-217ENST00000498722 CAMK2N1Q7Z7J9 78 aa6.86□□□□□ -1.31
LMNA-217ENST00000498722 KRTAP6-3Q3LI67 103 aa6.83□□□□□ -1.32
LMNA-217ENST00000498722 PRO2289Q9P1D8 64 aa6.8□□□□□ -1.32
LMNA-217ENST00000498722 MT1XP80297 61 aa6.74□□□□□ -1.33
LMNA-217ENST00000498722 C10orf95Q9H7T3 257 aa6.7□□□□□ -1.34
LMNA-217ENST00000498722 PRAC1Q96KF2 57 aa6.67□□□□□ -1.34
LMNA-217ENST00000498722 KRTAP25-1Q3LHN0 102 aa6.6□□□□□ -1.35
LMNA-217ENST00000498722 NEBP20929 6669 aa6.58□□□□□ -1.36
LMNA-217ENST00000498722 TNP1P09430 55 aa6.55□□□□□ -1.36
LMNA-217ENST00000498722 MUC12Q9UKN1 5478 aa6.54□□□□□ -1.36
LMNA-217ENST00000498722 KRTAP20-1Q3LI63 56 aa6.48□□□□□ -1.37
LMNA-217ENST00000498722 KRTAP5-9P26371 169 aa6.46□□□□□ -1.38
LMNA-217ENST00000498722 KRTAP10-7P60409 375 aaPredicted RBP6.45□□□□□ -1.38
LMNA-217ENST00000498722 KRTAP8-1Q8IUC2 63 aa6.45□□□□□ -1.38
LMNA-217ENST00000498722 KMT2DO14686 5537 aa6.43□□□□□ -1.38
LMNA-217ENST00000498722 PP632Q6XCG6 107 aa6.42□□□□□ -1.38
LMNA-217ENST00000498722 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.39
LMNA-217ENST00000498722 SPRR2FQ96RM1 72 aa6.4□□□□□ -1.39
LMNA-217ENST00000498722 KRTAP4-8A0A0G2JLE6 195 aa6.38□□□□□ -1.39
LMNA-217ENST00000498722 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
LMNA-217ENST00000498722 KRTAP4-8Q9BYQ9 185 aa6.38□□□□□ -1.39
LMNA-217ENST00000498722 MDN1Q9NU22 5596 aa6.31□□□□□ -1.4
LMNA-217ENST00000498722 SPRR2EP22531 72 aa6.25□□□□□ -1.41
LMNA-217ENST00000498722 SPRR2BP35325 72 aa6.25□□□□□ -1.41
LMNA-217ENST00000498722 SPRR2AP35326 72 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms