RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 H0Y9P7 68 aa7.33□□□□□ -1.24
MUC1-220ENST00000498431 ATOX1O00244 68 aa7.33□□□□□ -1.24
MUC1-220ENST00000498431 SMIM20Q8N5G0 67 aa7.31□□□□□ -1.24
MUC1-220ENST00000498431 LOC101927531A0A1B0GV80 90 aa7.3□□□□□ -1.24
MUC1-220ENST00000498431 C5orf47Q569G3 176 aa7.3□□□□□ -1.24
MUC1-220ENST00000498431 MDN1Q9NU22 5596 aa7.29□□□□□ -1.24
MUC1-220ENST00000498431 MP68P56378 58 aa7.29□□□□□ -1.24
MUC1-220ENST00000498431 CYP4F30PQ9H0H9 118 aa7.27□□□□□ -1.25
MUC1-220ENST00000498431 KMT2DO14686 5537 aa7.27□□□□□ -1.25
MUC1-220ENST00000498431 TRAV7A0A075B6U4 112 aa7.26□□□□□ -1.25
MUC1-220ENST00000498431 C1orf64Q8NEQ6 169 aa7.26□□□□□ -1.25
MUC1-220ENST00000498431 LINC00208Q96KT6 92 aa7.26□□□□□ -1.25
MUC1-220ENST00000498431 KRTAP5-9P26371 169 aa7.25□□□□□ -1.25
MUC1-220ENST00000498431 H3BPC8 53 aa7.24□□□□□ -1.25
MUC1-220ENST00000498431 Q5VV11 94 aa7.24□□□□□ -1.25
MUC1-220ENST00000498431 KRTAP10-5P60370 271 aa7.22□□□□□ -1.25
MUC1-220ENST00000498431 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
MUC1-220ENST00000498431 C4orf26Q17RF5 130 aa7.21□□□□□ -1.26
MUC1-220ENST00000498431 SERP2Q8N6R1 65 aa7.18□□□□□ -1.26
MUC1-220ENST00000498431 SPRR2GQ9BYE4 73 aa7.18□□□□□ -1.26
MUC1-220ENST00000498431 KLKP1Q107X0 134 aa7.13□□□□□ -1.27
MUC1-220ENST00000498431 KRTAP3-1Q9BYR8 98 aa7.1□□□□□ -1.27
MUC1-220ENST00000498431 KRTAP2-3P0C7H8 128 aa7.07□□□□□ -1.28
MUC1-220ENST00000498431 COX7CP15954 63 aa7.07□□□□□ -1.28
MUC1-220ENST00000498431 C20orf197Q8N268 126 aa7.07□□□□□ -1.28
MUC1-220ENST00000498431 KRTAP2-4Q9BYR9 128 aa7.07□□□□□ -1.28
MUC1-220ENST00000498431 SNURFQ9Y675 71 aa7.06□□□□□ -1.28
MUC1-220ENST00000498431 S4R3F8 94 aa7.06□□□□□ -1.28
MUC1-220ENST00000498431 CSAG1Q6PB30 78 aa7.04□□□□□ -1.28
MUC1-220ENST00000498431 LCA10Q71F78 164 aa7.04□□□□□ -1.28
MUC1-220ENST00000498431 ANAPC13Q9BS18 74 aa7.04□□□□□ -1.28
MUC1-220ENST00000498431 A8MUN3 132 aa7.02□□□□□ -1.29
MUC1-220ENST00000498431 DMAC1Q96GE9 116 aa6.96□□□□□ -1.3
MUC1-220ENST00000498431 SPRR2EP22531 72 aa6.94□□□□□ -1.3
MUC1-220ENST00000498431 SPRR2BP35325 72 aa6.94□□□□□ -1.3
MUC1-220ENST00000498431 SPRR2AP35326 72 aa6.94□□□□□ -1.3
MUC1-220ENST00000498431 SPRR2FQ96RM1 72 aa6.94□□□□□ -1.3
MUC1-220ENST00000498431 SPANXA2-OT1Q8N9U9 137 aa6.92□□□□□ -1.3
MUC1-220ENST00000498431 KRTAP3-3Q9BYR6 98 aa6.92□□□□□ -1.3
MUC1-220ENST00000498431 NDUFC1O43677 76 aa6.91□□□□□ -1.3
MUC1-220ENST00000498431 KRTAP3-2Q9BYR7 98 aa6.91□□□□□ -1.3
MUC1-220ENST00000498431 ACYP2P14621 99 aa6.88□□□□□ -1.31
MUC1-220ENST00000498431 CCDC179H3BU77 68 aa6.87□□□□□ -1.31
MUC1-220ENST00000498431 H7BZZ5 65 aa6.86□□□□□ -1.31
MUC1-220ENST00000498431 CYSTM1Q9H1C7 97 aa6.86□□□□□ -1.31
MUC1-220ENST00000498431 CRIPTQ9P021 101 aa6.84□□□□□ -1.31
MUC1-220ENST00000498431 KRTAP2-2Q9BYT5 123 aa6.82□□□□□ -1.32
MUC1-220ENST00000498431 KRTAP2-1Q9BYU5 128 aa6.82□□□□□ -1.32
MUC1-220ENST00000498431 LCE1AQ5T7P2 110 aa6.8□□□□□ -1.32
MUC1-220ENST00000498431 MT1XP80297 61 aa6.77□□□□□ -1.33
MUC1-220ENST00000498431 CHKB-CPT1BH3BT56 60 aa6.76□□□□□ -1.33
MUC1-220ENST00000498431 KRTAP8-1Q8IUC2 63 aa6.76□□□□□ -1.33
MUC1-220ENST00000498431 SPTSSBQ8NFR3 76 aa6.74□□□□□ -1.33
MUC1-220ENST00000498431 SPRR2DP22532 72 aa6.71□□□□□ -1.34
MUC1-220ENST00000498431 PRO2289Q9P1D8 64 aa6.71□□□□□ -1.34
MUC1-220ENST00000498431 COA5Q86WW8 74 aa6.7□□□□□ -1.34
MUC1-220ENST00000498431 H0YAA0 97 aa6.69□□□□□ -1.34
MUC1-220ENST00000498431 ATP5EP56381 51 aaPredicted RBP6.68□□□□□ -1.34
MUC1-220ENST00000498431 TMEM258P61165 79 aa6.66□□□□□ -1.34
MUC1-220ENST00000498431 KRTAP4-8A0A0G2JLE6 195 aa6.64□□□□□ -1.35
MUC1-220ENST00000498431 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
MUC1-220ENST00000498431 KRTAP4-8Q9BYQ9 185 aa6.64□□□□□ -1.35
MUC1-220ENST00000498431 ADM2Q7Z4H4 148 aa6.63□□□□□ -1.35
MUC1-220ENST00000498431 PCP4P48539 62 aa6.6□□□□□ -1.35
MUC1-220ENST00000498431 PLAC4Q8WY50 150 aa6.59□□□□□ -1.35
MUC1-220ENST00000498431 LCE3BQ5TA77 95 aa6.55□□□□□ -1.36
MUC1-220ENST00000498431 P0C880 135 aa6.51□□□□□ -1.37
MUC1-220ENST00000498431 KRTAP10-7P60409 375 aaPredicted RBP6.47□□□□□ -1.37
MUC1-220ENST00000498431 SEC61GP60059 68 aa6.45□□□□□ -1.38
MUC1-220ENST00000498431 SERP1Q9Y6X1 66 aa6.45□□□□□ -1.38
MUC1-220ENST00000498431 R4GN34 69 aa6.44□□□□□ -1.38
MUC1-220ENST00000498431 M0QZ58 72 aa6.4□□□□□ -1.38
MUC1-220ENST00000498431 KRTAP10-12P60413 245 aa6.4□□□□□ -1.38
MUC1-220ENST00000498431 GPR98Q8WXG9 6306 aa6.39□□□□□ -1.39
MUC1-220ENST00000498431 A0A1B0GU69 56 aa6.36□□□□□ -1.39
MUC1-220ENST00000498431 LINC01554Q52M75 96 aa6.34□□□□□ -1.39
MUC1-220ENST00000498431 LINC01558Q9Y6Z2 57 aa6.32□□□□□ -1.4
MUC1-220ENST00000498431 PRR15LQ9BU68 103 aa6.3□□□□□ -1.4
MUC1-220ENST00000498431 A0A1B0GU33 70 aa6.29□□□□□ -1.4
MUC1-220ENST00000498431 DSTQ03001 7570 aaKnown RBP6.27□□□□□ -1.41
MUC1-220ENST00000498431 RPS28P62857 69 aaKnown RBP6.26□□□□□ -1.41
MUC1-220ENST00000498431 KRTAP4-9Q9BYQ8 210 aa6.25□□□□□ -1.41
MUC1-220ENST00000498431 SMIM26A0A096LP01 95 aa6.24□□□□□ -1.41
MUC1-220ENST00000498431 KRTAP13-4Q3LI77 160 aa6.24□□□□□ -1.41
MUC1-220ENST00000498431 V9GYY9 64 aa6.23□□□□□ -1.41
MUC1-220ENST00000498431 Q1T7F1 81 aa6.19□□□□□ -1.42
MUC1-220ENST00000498431 SPATA8Q6RVD6 105 aa6.18□□□□□ -1.42
MUC1-220ENST00000498431 A0A0D9SG42 100 aa6.12□□□□□ -1.43
MUC1-220ENST00000498431 LCE5AQ5TCM9 118 aa6.12□□□□□ -1.43
MUC1-220ENST00000498431 PSPHP1O15172 72 aa6.1□□□□□ -1.43
MUC1-220ENST00000498431 UQCR11O14957 56 aa6.09□□□□□ -1.43
MUC1-220ENST00000498431 KRTAP19-7Q3SYF9 63 aa6.06□□□□□ -1.44
MUC1-220ENST00000498431 LCE1DQ5T752 114 aa6.04□□□□□ -1.44
MUC1-220ENST00000498431 A8MU10 97 aa6.03□□□□□ -1.44
MUC1-220ENST00000498431 KRTAP19-3Q7Z4W3 81 aa6.03□□□□□ -1.44
MUC1-220ENST00000498431 MT1EP04732 61 aa6.01□□□□□ -1.45
MUC1-220ENST00000498431 KRTAP12-1P59990 96 aa6.01□□□□□ -1.45
MUC1-220ENST00000498431 SPINT4Q6UDR6 99 aa6.01□□□□□ -1.45
MUC1-220ENST00000498431 HMCN1Q96RW7 5635 aa6□□□□□ -1.45
MUC1-220ENST00000498431 MIR22HGQ0VDD5 57 aa5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms