RNA–Protein interactions for RNA: ENST00000498107.5

SSBP1-214, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-214ENST00000498107 MT1FP04733 61 aa7.57□□□□□ -1.2
SSBP1-214ENST00000498107 NDUFC1O43677 76 aa7.53□□□□□ -1.2
SSBP1-214ENST00000498107 DMAC1Q96GE9 116 aa7.52□□□□□ -1.21
SSBP1-214ENST00000498107 KRTAP3-3Q9BYR6 98 aa7.51□□□□□ -1.21
SSBP1-214ENST00000498107 SNURFQ9Y675 71 aa7.5□□□□□ -1.21
SSBP1-214ENST00000498107 C20orf197Q8N268 126 aa7.49□□□□□ -1.21
SSBP1-214ENST00000498107 KRTAP9-3Q9BYQ3 159 aa7.46□□□□□ -1.22
SSBP1-214ENST00000498107 ACYP2P14621 99 aa7.44□□□□□ -1.22
SSBP1-214ENST00000498107 COX7CP15954 63 aa7.44□□□□□ -1.22
SSBP1-214ENST00000498107 SPANXA2-OT1Q8N9U9 137 aa7.41□□□□□ -1.22
SSBP1-214ENST00000498107 KRTAP3-2Q9BYR7 98 aa7.41□□□□□ -1.22
SSBP1-214ENST00000498107 H0YAA0 97 aa7.37□□□□□ -1.23
SSBP1-214ENST00000498107 ANAPC13Q9BS18 74 aa7.36□□□□□ -1.23
SSBP1-214ENST00000498107 LCE2BO14633 110 aa7.33□□□□□ -1.24
SSBP1-214ENST00000498107 SPTSSBQ8NFR3 76 aa7.33□□□□□ -1.24
SSBP1-214ENST00000498107 USH2AO75445 5202 aa7.32□□□□□ -1.24
SSBP1-214ENST00000498107 CHKB-CPT1BH3BT56 60 aa7.31□□□□□ -1.24
SSBP1-214ENST00000498107 CRIPTQ9P021 101 aa7.3□□□□□ -1.24
SSBP1-214ENST00000498107 SSPOA2VEC9 5147 aa7.28□□□□□ -1.24
SSBP1-214ENST00000498107 ADM2Q7Z4H4 148 aa7.26□□□□□ -1.25
SSBP1-214ENST00000498107 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.23□□□□□ -1.25
SSBP1-214ENST00000498107 H7BZZ5 65 aa7.22□□□□□ -1.25
SSBP1-214ENST00000498107 KRTAP19-1Q8IUB9 90 aa7.22□□□□□ -1.25
SSBP1-214ENST00000498107 SPRR2GQ9BYE4 73 aa7.22□□□□□ -1.25
SSBP1-214ENST00000498107 KRTAP9-7A8MTY7 169 aa7.19□□□□□ -1.26
SSBP1-214ENST00000498107 CYSTM1Q9H1C7 97 aa7.17□□□□□ -1.26
SSBP1-214ENST00000498107 FCGBPQ9Y6R7 5405 aaPredicted RBP7.16□□□□□ -1.26
SSBP1-214ENST00000498107 CCDC179H3BU77 68 aa7.15□□□□□ -1.26
SSBP1-214ENST00000498107 COA5Q86WW8 74 aa7.15□□□□□ -1.26
SSBP1-214ENST00000498107 Q5VV11 94 aa7.13□□□□□ -1.27
SSBP1-214ENST00000498107 P0C880 135 aa7.11□□□□□ -1.27
SSBP1-214ENST00000498107 KRTAP19-8Q3LI54 63 aa7.11□□□□□ -1.27
SSBP1-214ENST00000498107 R4GN34 69 aa7.09□□□□□ -1.27
SSBP1-214ENST00000498107 KRTAP19-6Q3LI70 58 aa7.07□□□□□ -1.28
SSBP1-214ENST00000498107 ATP5EP56381 51 aaPredicted RBP7.06□□□□□ -1.28
SSBP1-214ENST00000498107 M0QZ58 72 aa7.03□□□□□ -1.28
SSBP1-214ENST00000498107 MT1BP07438 61 aa7.03□□□□□ -1.28
SSBP1-214ENST00000498107 MACF1Q9UPN3 7388 aaKnown RBP7.01□□□□□ -1.29
SSBP1-214ENST00000498107 SYNE2Q8WXH0 6885 aaKnown RBP7.01□□□□□ -1.29
SSBP1-214ENST00000498107 SEC61GP60059 68 aa6.98□□□□□ -1.29
SSBP1-214ENST00000498107 TMEM258P61165 79 aa6.96□□□□□ -1.3
SSBP1-214ENST00000498107 SERP1Q9Y6X1 66 aa6.95□□□□□ -1.3
SSBP1-214ENST00000498107 PLAC4Q8WY50 150 aa6.92□□□□□ -1.3
SSBP1-214ENST00000498107 A6NN06 94 aa6.9□□□□□ -1.3
SSBP1-214ENST00000498107 LINC01554Q52M75 96 aa6.9□□□□□ -1.3
SSBP1-214ENST00000498107 KRTAP10-5P60370 271 aa6.84□□□□□ -1.31
SSBP1-214ENST00000498107 A0A1B0GU69 56 aa6.81□□□□□ -1.32
SSBP1-214ENST00000498107 PRO2289Q9P1D8 64 aa6.79□□□□□ -1.32
SSBP1-214ENST00000498107 A0A1B0GU33 70 aa6.78□□□□□ -1.32
SSBP1-214ENST00000498107 KRTAP13-4Q3LI77 160 aa6.75□□□□□ -1.33
SSBP1-214ENST00000498107 PRR15LQ9BU68 103 aa6.75□□□□□ -1.33
SSBP1-214ENST00000498107 LINC01558Q9Y6Z2 57 aa6.7□□□□□ -1.34
SSBP1-214ENST00000498107 MT1XP80297 61 aa6.68□□□□□ -1.34
SSBP1-214ENST00000498107 PCP4P48539 62 aa6.67□□□□□ -1.34
SSBP1-214ENST00000498107 KRTAP6-3Q3LI67 103 aa6.67□□□□□ -1.34
SSBP1-214ENST00000498107 SPATA8Q6RVD6 105 aa6.66□□□□□ -1.34
SSBP1-214ENST00000498107 SMIM26A0A096LP01 95 aa6.63□□□□□ -1.35
SSBP1-214ENST00000498107 A0A0D9SG42 100 aa6.63□□□□□ -1.35
SSBP1-214ENST00000498107 NEBP20929 6669 aa6.6□□□□□ -1.35
SSBP1-214ENST00000498107 CAMK2N1Q7Z7J9 78 aa6.58□□□□□ -1.36
SSBP1-214ENST00000498107 V9GYY9 64 aa6.57□□□□□ -1.36
SSBP1-214ENST00000498107 SPINT4Q6UDR6 99 aa6.54□□□□□ -1.36
SSBP1-214ENST00000498107 UQCR11O14957 56 aa6.51□□□□□ -1.37
SSBP1-214ENST00000498107 KRTAP12-2P59991 146 aa6.51□□□□□ -1.37
SSBP1-214ENST00000498107 KRTAP12-1P59990 96 aa6.49□□□□□ -1.37
SSBP1-214ENST00000498107 Q1T7F1 81 aa6.49□□□□□ -1.37
SSBP1-214ENST00000498107 MUC12Q9UKN1 5478 aa6.47□□□□□ -1.37
SSBP1-214ENST00000498107 A8MU10 97 aa6.46□□□□□ -1.38
SSBP1-214ENST00000498107 RPS28P62857 69 aaKnown RBP6.46□□□□□ -1.38
SSBP1-214ENST00000498107 PSPHP1O15172 72 aa6.4□□□□□ -1.38
SSBP1-214ENST00000498107 KRTAP10-12P60413 245 aa6.38□□□□□ -1.39
SSBP1-214ENST00000498107 KRTAP10-7P60409 375 aaPredicted RBP6.37□□□□□ -1.39
SSBP1-214ENST00000498107 MIR22HGQ0VDD5 57 aa6.37□□□□□ -1.39
SSBP1-214ENST00000498107 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
SSBP1-214ENST00000498107 KRTAP8-1Q8IUC2 63 aa6.33□□□□□ -1.4
SSBP1-214ENST00000498107 KMT2DO14686 5537 aa6.32□□□□□ -1.4
SSBP1-214ENST00000498107 MDN1Q9NU22 5596 aa6.3□□□□□ -1.4
SSBP1-214ENST00000498107 KRTAP20-1Q3LI63 56 aa6.28□□□□□ -1.4
SSBP1-214ENST00000498107 KRTAP4-8A0A0G2JLE6 195 aa6.27□□□□□ -1.41
SSBP1-214ENST00000498107 KRTAP4-8Q9BYQ9 185 aa6.27□□□□□ -1.41
SSBP1-214ENST00000498107 K7ERS5 55 aa6.26□□□□□ -1.41
SSBP1-214ENST00000498107 A6NED7 52 aa6.24□□□□□ -1.41
SSBP1-214ENST00000498107 SPRR2FQ96RM1 72 aa6.24□□□□□ -1.41
SSBP1-214ENST00000498107 TNP1P09430 55 aa6.16□□□□□ -1.42
SSBP1-214ENST00000498107 C10orf95Q9H7T3 257 aa6.16□□□□□ -1.42
SSBP1-214ENST00000498107 SPRR2EP22531 72 aa6.07□□□□□ -1.44
SSBP1-214ENST00000498107 SPRR2BP35325 72 aa6.07□□□□□ -1.44
SSBP1-214ENST00000498107 SPRR2AP35326 72 aa6.07□□□□□ -1.44
SSBP1-214ENST00000498107 KRTAP2-3P0C7H8 128 aa6.05□□□□□ -1.44
SSBP1-214ENST00000498107 KRTAP2-4Q9BYR9 128 aa6.05□□□□□ -1.44
SSBP1-214ENST00000498107 CDC42SE1Q9NRR8 79 aa6.03□□□□□ -1.44
SSBP1-214ENST00000498107 LCE1AQ5T7P2 110 aa6.01□□□□□ -1.45
SSBP1-214ENST00000498107 KRTAP25-1Q3LHN0 102 aa5.98□□□□□ -1.45
SSBP1-214ENST00000498107 KRTAP19-7Q3SYF9 63 aa5.97□□□□□ -1.45
SSBP1-214ENST00000498107 LOC100996750A0A140TA64 210 aa5.94□□□□□ -1.46
SSBP1-214ENST00000498107 LCE3AQ5TA76 89 aa5.94□□□□□ -1.46
SSBP1-214ENST00000498107 KRTAP4-6Q9BYQ5 205 aa5.94□□□□□ -1.46
SSBP1-214ENST00000498107 MT1EP04732 61 aa5.91□□□□□ -1.46
SSBP1-214ENST00000498107 KRTAP19-5Q3LI72 72 aa5.91□□□□□ -1.46
SSBP1-214ENST00000498107 SPRR2DP22532 72 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms