RNA–Protein interactions for RNA: ENST00000498058.1

PRKCB-209, Transcript of protein kinase C beta, humanhuman

TSL 3 BASIC

Gene PRKCB, Length 480 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-209ENST00000498058 KRTAP19-6Q3LI70 58 aa8.91□□□□□ -0.98
PRKCB-209ENST00000498058 CYP4F30PQ9H0H9 118 aa8.91□□□□□ -0.98
PRKCB-209ENST00000498058 SERP2Q8N6R1 65 aa8.9□□□□□ -0.98
PRKCB-209ENST00000498058 SYNE2Q8WXH0 6885 aaKnown RBP8.87□□□□□ -0.99
PRKCB-209ENST00000498058 ANAPC13Q9BS18 74 aa8.79□□□□□ -1
PRKCB-209ENST00000498058 C4orf26Q17RF5 130 aa8.78□□□□□ -1
PRKCB-209ENST00000498058 COX7CP15954 63 aa8.77□□□□□ -1.01
PRKCB-209ENST00000498058 C20orf197Q8N268 126 aa8.75□□□□□ -1.01
PRKCB-209ENST00000498058 KLKP1Q107X0 134 aa8.74□□□□□ -1.01
PRKCB-209ENST00000498058 SNURFQ9Y675 71 aa8.71□□□□□ -1.02
PRKCB-209ENST00000498058 H1FX-AS1Q4G0G2 97 aa8.7□□□□□ -1.02
PRKCB-209ENST00000498058 A8MUN3 132 aa8.65□□□□□ -1.02
PRKCB-209ENST00000498058 KRTAP6-3Q3LI67 103 aa8.64□□□□□ -1.03
PRKCB-209ENST00000498058 NDUFC1O43677 76 aa8.62□□□□□ -1.03
PRKCB-209ENST00000498058 KRTAP3-1Q9BYR8 98 aa8.61□□□□□ -1.03
PRKCB-209ENST00000498058 SPANXA2-OT1Q8N9U9 137 aa8.57□□□□□ -1.04
PRKCB-209ENST00000498058 DMAC1Q96GE9 116 aa8.55□□□□□ -1.04
PRKCB-209ENST00000498058 S4R3F8 94 aa8.55□□□□□ -1.04
PRKCB-209ENST00000498058 CCDC179H3BU77 68 aa8.53□□□□□ -1.04
PRKCB-209ENST00000498058 ACYP2P14621 99 aa8.49□□□□□ -1.05
PRKCB-209ENST00000498058 H7BZZ5 65 aa8.48□□□□□ -1.05
PRKCB-209ENST00000498058 LCA10Q71F78 164 aa8.44□□□□□ -1.06
PRKCB-209ENST00000498058 CYSTM1Q9H1C7 97 aa8.44□□□□□ -1.06
PRKCB-209ENST00000498058 MT1BP07438 61 aa8.43□□□□□ -1.06
PRKCB-209ENST00000498058 CSAG1Q6PB30 78 aa8.43□□□□□ -1.06
PRKCB-209ENST00000498058 NEBP20929 6669 aa8.38□□□□□ -1.07
PRKCB-209ENST00000498058 CHKB-CPT1BH3BT56 60 aa8.36□□□□□ -1.07
PRKCB-209ENST00000498058 ATP5EP56381 51 aaPredicted RBP8.36□□□□□ -1.07
PRKCB-209ENST00000498058 A6NN06 94 aa8.35□□□□□ -1.07
PRKCB-209ENST00000498058 SPTSSBQ8NFR3 76 aa8.34□□□□□ -1.07
PRKCB-209ENST00000498058 KRTAP19-8Q3LI54 63 aa8.33□□□□□ -1.08
PRKCB-209ENST00000498058 KRTAP3-3Q9BYR6 98 aa8.33□□□□□ -1.08
PRKCB-209ENST00000498058 MUC12Q9UKN1 5478 aa8.33□□□□□ -1.08
PRKCB-209ENST00000498058 TMEM258P61165 79 aa8.32□□□□□ -1.08
PRKCB-209ENST00000498058 PCP4P48539 62 aa8.31□□□□□ -1.08
PRKCB-209ENST00000498058 SPRR2GQ9BYE4 73 aa8.31□□□□□ -1.08
PRKCB-209ENST00000498058 Q5VV11 94 aa8.29□□□□□ -1.08
PRKCB-209ENST00000498058 COA5Q86WW8 74 aa8.27□□□□□ -1.09
PRKCB-209ENST00000498058 KRTAP10-5P60370 271 aa8.25□□□□□ -1.09
PRKCB-209ENST00000498058 H0YAA0 97 aa8.18□□□□□ -1.1
PRKCB-209ENST00000498058 KRTAP5-9P26371 169 aa8.14□□□□□ -1.11
PRKCB-209ENST00000498058 KRTAP20-1Q3LI63 56 aa8.12□□□□□ -1.11
PRKCB-209ENST00000498058 KMT2DO14686 5537 aa8.09□□□□□ -1.11
PRKCB-209ENST00000498058 ADM2Q7Z4H4 148 aa8.09□□□□□ -1.11
PRKCB-209ENST00000498058 MDN1Q9NU22 5596 aa8.05□□□□□ -1.12
PRKCB-209ENST00000498058 SERP1Q9Y6X1 66 aa8.05□□□□□ -1.12
PRKCB-209ENST00000498058 CRIPTQ9P021 101 aa8.02□□□□□ -1.13
PRKCB-209ENST00000498058 SEC61GP60059 68 aa8□□□□□ -1.13
PRKCB-209ENST00000498058 KRTAP3-2Q9BYR7 98 aa7.94□□□□□ -1.14
PRKCB-209ENST00000498058 P0C880 135 aa7.93□□□□□ -1.14
PRKCB-209ENST00000498058 R4GN34 69 aa7.88□□□□□ -1.15
PRKCB-209ENST00000498058 A0A1B0GU69 56 aa7.87□□□□□ -1.15
PRKCB-209ENST00000498058 PRR15LQ9BU68 103 aa7.86□□□□□ -1.15
PRKCB-209ENST00000498058 RPS28P62857 69 aaKnown RBP7.84□□□□□ -1.15
PRKCB-209ENST00000498058 KRTAP2-3P0C7H8 128 aa7.83□□□□□ -1.16
PRKCB-209ENST00000498058 KRTAP2-4Q9BYR9 128 aa7.83□□□□□ -1.16
PRKCB-209ENST00000498058 M0QZ58 72 aa7.82□□□□□ -1.16
PRKCB-209ENST00000498058 MT1XP80297 61 aa7.82□□□□□ -1.16
PRKCB-209ENST00000498058 LINC01558Q9Y6Z2 57 aa7.82□□□□□ -1.16
PRKCB-209ENST00000498058 SPRR2FQ96RM1 72 aa7.81□□□□□ -1.16
PRKCB-209ENST00000498058 V9GYY9 64 aa7.8□□□□□ -1.16
PRKCB-209ENST00000498058 SMIM26A0A096LP01 95 aa7.79□□□□□ -1.16
PRKCB-209ENST00000498058 SPRR2EP22531 72 aa7.77□□□□□ -1.17
PRKCB-209ENST00000498058 SPRR2BP35325 72 aa7.77□□□□□ -1.17
PRKCB-209ENST00000498058 SPRR2AP35326 72 aa7.77□□□□□ -1.17
PRKCB-209ENST00000498058 A0A1B0GU33 70 aa7.74□□□□□ -1.17
PRKCB-209ENST00000498058 Q1T7F1 81 aa7.71□□□□□ -1.18
PRKCB-209ENST00000498058 PRO2289Q9P1D8 64 aa7.69□□□□□ -1.18
PRKCB-209ENST00000498058 LINC01554Q52M75 96 aa7.67□□□□□ -1.18
PRKCB-209ENST00000498058 LCE1AQ5T7P2 110 aa7.67□□□□□ -1.18
PRKCB-209ENST00000498058 KRTAP8-1Q8IUC2 63 aa7.67□□□□□ -1.18
PRKCB-209ENST00000498058 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
PRKCB-209ENST00000498058 PLAC4Q8WY50 150 aa7.63□□□□□ -1.19
PRKCB-209ENST00000498058 KRTAP4-8A0A0G2JLE6 195 aa7.62□□□□□ -1.19
PRKCB-209ENST00000498058 KRTAP4-8Q9BYQ9 185 aa7.62□□□□□ -1.19
PRKCB-209ENST00000498058 KRTAP13-4Q3LI77 160 aa7.61□□□□□ -1.19
PRKCB-209ENST00000498058 PSPHP1O15172 72 aa7.58□□□□□ -1.2
PRKCB-209ENST00000498058 SPATA8Q6RVD6 105 aa7.58□□□□□ -1.2
PRKCB-209ENST00000498058 UQCR11O14957 56 aa7.57□□□□□ -1.2
PRKCB-209ENST00000498058 KRTAP2-2Q9BYT5 123 aa7.57□□□□□ -1.2
PRKCB-209ENST00000498058 KRTAP2-1Q9BYU5 128 aa7.57□□□□□ -1.2
PRKCB-209ENST00000498058 A0A0D9SG42 100 aa7.51□□□□□ -1.21
PRKCB-209ENST00000498058 SPRR2DP22532 72 aa7.5□□□□□ -1.21
PRKCB-209ENST00000498058 KRTAP10-7P60409 375 aaPredicted RBP7.47□□□□□ -1.21
PRKCB-209ENST00000498058 MIR22HGQ0VDD5 57 aa7.43□□□□□ -1.22
PRKCB-209ENST00000498058 A6NED7 52 aa7.4□□□□□ -1.22
PRKCB-209ENST00000498058 KRTAP10-12P60413 245 aa7.4□□□□□ -1.22
PRKCB-209ENST00000498058 A8MU10 97 aa7.39□□□□□ -1.23
PRKCB-209ENST00000498058 SPINT4Q6UDR6 99 aa7.38□□□□□ -1.23
PRKCB-209ENST00000498058 CAMK2N1Q7Z7J9 78 aa7.35□□□□□ -1.23
PRKCB-209ENST00000498058 KRTAP12-1P59990 96 aa7.34□□□□□ -1.23
PRKCB-209ENST00000498058 LCE3BQ5TA77 95 aa7.33□□□□□ -1.24
PRKCB-209ENST00000498058 K7ERS5 55 aa7.27□□□□□ -1.25
PRKCB-209ENST00000498058 CDC42SE1Q9NRR8 79 aa7.19□□□□□ -1.26
PRKCB-209ENST00000498058 KRTAP19-7Q3SYF9 63 aa7.01□□□□□ -1.29
PRKCB-209ENST00000498058 DSTQ03001 7570 aaKnown RBP7.01□□□□□ -1.29
PRKCB-209ENST00000498058 LCE5AQ5TCM9 118 aa6.99□□□□□ -1.29
PRKCB-209ENST00000498058 BRK1Q8WUW1 75 aa6.99□□□□□ -1.29
PRKCB-209ENST00000498058 KRTAP4-9Q9BYQ8 210 aa6.95□□□□□ -1.3
PRKCB-209ENST00000498058 C10orf95Q9H7T3 257 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms